RNA–Protein interactions for RNA: ENST00000454960.1

BRPF3-207, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 3

Gene BRPF3, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-207ENST00000454960 NISCHQ9Y2I1 1504 aa23.12■■□□□ 1.29
BRPF3-207ENST00000454960 ABCC9O60706 1549 aa21.58■■□□□ 1.04
BRPF3-207ENST00000454960 CCDC180Q9P1Z9 1646 aa21■□□□□ 0.95
BRPF3-207ENST00000454960 DNAJC5BQ9UF47 199 aa20.69■□□□□ 0.9
BRPF3-207ENST00000454960 RB1CC1Q8TDY2 1594 aa20.26■□□□□ 0.83
BRPF3-207ENST00000454960 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
BRPF3-207ENST00000454960 NACADO15069 1562 aa19.95■□□□□ 0.78
BRPF3-207ENST00000454960 UNC13AQ9UPW8 1703 aa19.91■□□□□ 0.78
BRPF3-207ENST00000454960 DCAF8L2P0C7V8 631 aa19.84■□□□□ 0.77
BRPF3-207ENST00000454960 BICRAQ9NZM4 1560 aa19.69■□□□□ 0.74
BRPF3-207ENST00000454960 CECR2Q9BXF3 1484 aa19.47■□□□□ 0.71
BRPF3-207ENST00000454960 CC2D2AQ9P2K1 1620 aa19.47■□□□□ 0.71
BRPF3-207ENST00000454960 MYO15BQ96JP2 1530 aa19.41■□□□□ 0.7
BRPF3-207ENST00000454960 DNAJC5Q9H3Z4 198 aa19.38■□□□□ 0.69
BRPF3-207ENST00000454960 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
BRPF3-207ENST00000454960 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.67
BRPF3-207ENST00000454960 ZCCHC6Q5VYS8 1495 aaKnown RBP19.26■□□□□ 0.67
BRPF3-207ENST00000454960 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
BRPF3-207ENST00000454960 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
BRPF3-207ENST00000454960 CUX2O14529 1486 aa18.77■□□□□ 0.59
BRPF3-207ENST00000454960 ERCC6Q03468 1493 aa18.68■□□□□ 0.58
BRPF3-207ENST00000454960 TRIM41Q8WV44 630 aa18.41■□□□□ 0.54
BRPF3-207ENST00000454960 NCAPD3P42695 1498 aa18.39■□□□□ 0.54
BRPF3-207ENST00000454960 NESP48681 1621 aa18.38■□□□□ 0.53
BRPF3-207ENST00000454960 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
BRPF3-207ENST00000454960 ATAD2BQ9ULI0 1458 aa18.29■□□□□ 0.52
BRPF3-207ENST00000454960 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
BRPF3-207ENST00000454960 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
BRPF3-207ENST00000454960 KIF21AQ7Z4S6 1674 aa18.18■□□□□ 0.5
BRPF3-207ENST00000454960 SMARCA4P51532 1647 aa18.18■□□□□ 0.5
BRPF3-207ENST00000454960 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
BRPF3-207ENST00000454960 BAZ1BQ9UIG0 1483 aaKnown RBP18.12■□□□□ 0.49
BRPF3-207ENST00000454960 PDS5BQ9NTI5 1447 aa18.01■□□□□ 0.47
BRPF3-207ENST00000454960 BAZ1AQ9NRL2 1556 aaPredicted RBP17.98■□□□□ 0.47
BRPF3-207ENST00000454960 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
BRPF3-207ENST00000454960 MRC2Q9UBG0 1479 aa17.92■□□□□ 0.46
BRPF3-207ENST00000454960 WDR62O43379 1518 aa17.89■□□□□ 0.45
BRPF3-207ENST00000454960 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
BRPF3-207ENST00000454960 CADPSQ9ULU8 1353 aa17.82■□□□□ 0.44
BRPF3-207ENST00000454960 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
BRPF3-207ENST00000454960 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
BRPF3-207ENST00000454960 RIMBP3CA6NJZ7 1639 aa17.72■□□□□ 0.43
BRPF3-207ENST00000454960 RIMBP3BA6NNM3 1639 aa17.72■□□□□ 0.43
BRPF3-207ENST00000454960 RIMBP3Q9UFD9 1639 aa17.72■□□□□ 0.43
BRPF3-207ENST00000454960 FANCD2Q9BXW9 1451 aa17.67■□□□□ 0.42
BRPF3-207ENST00000454960 WIZO95785 1651 aa17.64■□□□□ 0.42
BRPF3-207ENST00000454960 ARHGEF11O15085 1522 aa17.57■□□□□ 0.4
BRPF3-207ENST00000454960 URB2Q14146 1524 aaKnown RBP17.56■□□□□ 0.4
BRPF3-207ENST00000454960 RSF1Q96T23 1441 aaPredicted RBP17.53■□□□□ 0.4
BRPF3-207ENST00000454960 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
BRPF3-207ENST00000454960 CFTRP13569 1480 aa17.5■□□□□ 0.39
BRPF3-207ENST00000454960 CYB5RLQ6IPT4 315 aa17.49■□□□□ 0.39
BRPF3-207ENST00000454960 ZNF608Q9ULD9 1512 aaPredicted RBP17.45■□□□□ 0.38
BRPF3-207ENST00000454960 TOP2AP11388 1531 aaKnown RBP17.43■□□□□ 0.38
BRPF3-207ENST00000454960 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
BRPF3-207ENST00000454960 PRDM2Q13029 1718 aa17.41■□□□□ 0.38
BRPF3-207ENST00000454960 CHD1O14646 1710 aa17.38■□□□□ 0.37
BRPF3-207ENST00000454960 IFT140Q96RY7 1462 aa17.38■□□□□ 0.37
BRPF3-207ENST00000454960 ARAP1Q96P48 1450 aa17.36■□□□□ 0.37
BRPF3-207ENST00000454960 EIF4G3O43432 1585 aaKnown RBP17.36■□□□□ 0.37
BRPF3-207ENST00000454960 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
BRPF3-207ENST00000454960 FBLN2P98095 1184 aa17.26■□□□□ 0.35
BRPF3-207ENST00000454960 AQRO60306 1485 aaKnown RBP eCLIP17.22■□□□□ 0.35
BRPF3-207ENST00000454960 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
BRPF3-207ENST00000454960 TARBP1Q13395 1621 aaKnown RBP17.17■□□□□ 0.34
BRPF3-207ENST00000454960 DNMBPQ6XZF7 1577 aa17.16■□□□□ 0.34
BRPF3-207ENST00000454960 ABCC8Q09428 1581 aa17.15■□□□□ 0.34
BRPF3-207ENST00000454960 CLASP1Q7Z460 1538 aa17.07■□□□□ 0.32
BRPF3-207ENST00000454960 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
BRPF3-207ENST00000454960 SYNJ1O43426 1573 aa17.04■□□□□ 0.32
BRPF3-207ENST00000454960 SNAPC4Q5SXM2 1469 aa17.04■□□□□ 0.32
BRPF3-207ENST00000454960 RAD54L2Q9Y4B4 1467 aa17.03■□□□□ 0.32
BRPF3-207ENST00000454960 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.31
BRPF3-207ENST00000454960 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
BRPF3-207ENST00000454960 SOGA1O94964 1423 aa16.96■□□□□ 0.3
BRPF3-207ENST00000454960 GAPVD1Q14C86 1478 aa16.94■□□□□ 0.3
BRPF3-207ENST00000454960 MAGI1Q96QZ7 1491 aaPredicted RBP16.92■□□□□ 0.3
BRPF3-207ENST00000454960 WDR97A6NE52 1622 aa16.92■□□□□ 0.3
BRPF3-207ENST00000454960 FGD5Q6ZNL6 1462 aa16.89■□□□□ 0.29
BRPF3-207ENST00000454960 SYNJ2O15056 1496 aa16.88■□□□□ 0.29
BRPF3-207ENST00000454960 PBRM1Q86U86 1689 aa16.88■□□□□ 0.29
BRPF3-207ENST00000454960 GRIN2BQ13224 1484 aa16.87■□□□□ 0.29
BRPF3-207ENST00000454960 SUPT5HO00267 1087 aaKnown RBP16.82■□□□□ 0.28
BRPF3-207ENST00000454960 ERCC6L2Q5T890 1561 aa16.81■□□□□ 0.28
BRPF3-207ENST00000454960 KIF13AQ9H1H9 1805 aa16.81■□□□□ 0.28
BRPF3-207ENST00000454960 CUX1P39880 1505 aa16.78■□□□□ 0.28
BRPF3-207ENST00000454960 CEP170Q5SW79 1584 aa16.71■□□□□ 0.27
BRPF3-207ENST00000454960 ILDR1Q86SU0 546 aaPredicted RBP16.7■□□□□ 0.26
BRPF3-207ENST00000454960 ABCA5Q8WWZ7 1642 aa16.69■□□□□ 0.26
BRPF3-207ENST00000454960 GRIN2AQ12879 1464 aa16.67■□□□□ 0.26
BRPF3-207ENST00000454960 SHROOM2Q13796 1616 aa16.63■□□□□ 0.25
BRPF3-207ENST00000454960 ABCA10Q8WWZ4 1543 aa16.62■□□□□ 0.25
BRPF3-207ENST00000454960 ADAMTS12P58397 1594 aa16.62■□□□□ 0.25
BRPF3-207ENST00000454960 NUP160Q12769 1436 aa16.6■□□□□ 0.25
BRPF3-207ENST00000454960 KDM4FA0A1W2PPD8 638 aa16.59■□□□□ 0.25
BRPF3-207ENST00000454960 FAM69CQ0P6D2 419 aa16.58■□□□□ 0.24
BRPF3-207ENST00000454960 TSPOAP1O95153 1857 aa16.57■□□□□ 0.24
BRPF3-207ENST00000454960 KDM6BO15054 1643 aa16.56■□□□□ 0.24
BRPF3-207ENST00000454960 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
BRPF3-207ENST00000454960 ABCC10Q5T3U5 1492 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms