RNA–Protein interactions for RNA: ENST00000454906.6

EXTL3-202, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-202ENST00000454906 NISCHQ9Y2I1 1504 aa21.5■■□□□ 1.03
EXTL3-202ENST00000454906 CCDC180Q9P1Z9 1646 aa19.23■□□□□ 0.67
EXTL3-202ENST00000454906 ABCC9O60706 1549 aa18.9■□□□□ 0.62
EXTL3-202ENST00000454906 DCAF8L2P0C7V8 631 aa18.11■□□□□ 0.49
EXTL3-202ENST00000454906 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.48
EXTL3-202ENST00000454906 NACADO15069 1562 aa17.97■□□□□ 0.47
EXTL3-202ENST00000454906 UNC13AQ9UPW8 1703 aa17.95■□□□□ 0.46
EXTL3-202ENST00000454906 ZCCHC6Q5VYS8 1495 aaKnown RBP17.92■□□□□ 0.46
EXTL3-202ENST00000454906 MYO15BQ96JP2 1530 aa17.7■□□□□ 0.42
EXTL3-202ENST00000454906 SCRIBQ14160 1630 aa17.69■□□□□ 0.42
EXTL3-202ENST00000454906 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
EXTL3-202ENST00000454906 PABPN1Q86U42 306 aaKnown RBP eCLIP17.6■□□□□ 0.41
EXTL3-202ENST00000454906 BICRAQ9NZM4 1560 aa17.56■□□□□ 0.4
EXTL3-202ENST00000454906 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
EXTL3-202ENST00000454906 SHROOM4Q9ULL8 1493 aa17.19■□□□□ 0.34
EXTL3-202ENST00000454906 EIF4G1Q04637 1599 aaKnown RBP17.1■□□□□ 0.33
EXTL3-202ENST00000454906 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
EXTL3-202ENST00000454906 CECR2Q9BXF3 1484 aa16.9■□□□□ 0.3
EXTL3-202ENST00000454906 SMARCA4P51532 1647 aa16.81■□□□□ 0.28
EXTL3-202ENST00000454906 BAZ1AQ9NRL2 1556 aaPredicted RBP16.68■□□□□ 0.26
EXTL3-202ENST00000454906 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
EXTL3-202ENST00000454906 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
EXTL3-202ENST00000454906 ATAD2BQ9ULI0 1458 aa16.6■□□□□ 0.25
EXTL3-202ENST00000454906 WIZO95785 1651 aa16.59■□□□□ 0.25
EXTL3-202ENST00000454906 BAZ1BQ9UIG0 1483 aaKnown RBP16.53■□□□□ 0.24
EXTL3-202ENST00000454906 HMGXB3Q12766 1538 aa16.52■□□□□ 0.24
EXTL3-202ENST00000454906 NCAPD3P42695 1498 aa16.5■□□□□ 0.23
EXTL3-202ENST00000454906 PEG3Q9GZU2 1588 aa16.49■□□□□ 0.23
EXTL3-202ENST00000454906 NESP48681 1621 aa16.35■□□□□ 0.21
EXTL3-202ENST00000454906 RSF1Q96T23 1441 aaPredicted RBP16.34■□□□□ 0.21
EXTL3-202ENST00000454906 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
EXTL3-202ENST00000454906 TOP2AP11388 1531 aaKnown RBP16.28■□□□□ 0.2
EXTL3-202ENST00000454906 ERCC6Q03468 1493 aa16.27■□□□□ 0.19
EXTL3-202ENST00000454906 LAMC3Q9Y6N6 1575 aa16.2■□□□□ 0.18
EXTL3-202ENST00000454906 PRDM2Q13029 1718 aa16.16■□□□□ 0.18
EXTL3-202ENST00000454906 THOC2Q8NI27 1593 aaKnown RBP16.12■□□□□ 0.17
EXTL3-202ENST00000454906 SUPT5HO00267 1087 aaKnown RBP16.06■□□□□ 0.16
EXTL3-202ENST00000454906 CCDC88BA6NC98 1476 aa16.05■□□□□ 0.16
EXTL3-202ENST00000454906 CADPSQ9ULU8 1353 aa16.05■□□□□ 0.16
EXTL3-202ENST00000454906 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.15
EXTL3-202ENST00000454906 CUX2O14529 1486 aa15.97■□□□□ 0.15
EXTL3-202ENST00000454906 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
EXTL3-202ENST00000454906 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
EXTL3-202ENST00000454906 CFTRP13569 1480 aa15.96■□□□□ 0.14
EXTL3-202ENST00000454906 MRC2Q9UBG0 1479 aa15.94■□□□□ 0.14
EXTL3-202ENST00000454906 WDR62O43379 1518 aa15.89■□□□□ 0.13
EXTL3-202ENST00000454906 URB2Q14146 1524 aaKnown RBP15.84■□□□□ 0.13
EXTL3-202ENST00000454906 DNMBPQ6XZF7 1577 aa15.73■□□□□ 0.11
EXTL3-202ENST00000454906 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
EXTL3-202ENST00000454906 ABCC8Q09428 1581 aa15.63■□□□□ 0.09
EXTL3-202ENST00000454906 CUX1P39880 1505 aa15.63■□□□□ 0.09
EXTL3-202ENST00000454906 EIF4G3O43432 1585 aaKnown RBP15.62■□□□□ 0.09
EXTL3-202ENST00000454906 ZNF608Q9ULD9 1512 aaPredicted RBP15.6■□□□□ 0.09
EXTL3-202ENST00000454906 TARBP1Q13395 1621 aaKnown RBP15.59■□□□□ 0.09
EXTL3-202ENST00000454906 POLA1P09884 1462 aaPredicted RBP15.59■□□□□ 0.09
EXTL3-202ENST00000454906 FGD5Q6ZNL6 1462 aa15.59■□□□□ 0.09
EXTL3-202ENST00000454906 IFT140Q96RY7 1462 aa15.57■□□□□ 0.08
EXTL3-202ENST00000454906 RAD54L2Q9Y4B4 1467 aa15.57■□□□□ 0.08
EXTL3-202ENST00000454906 WDR97A6NE52 1622 aa15.56■□□□□ 0.08
EXTL3-202ENST00000454906 CHD1O14646 1710 aa15.55■□□□□ 0.08
EXTL3-202ENST00000454906 SYNJ1O43426 1573 aa15.54■□□□□ 0.08
EXTL3-202ENST00000454906 PBRM1Q86U86 1689 aa15.53■□□□□ 0.08
EXTL3-202ENST00000454906 BIVM-ERCC5R4GMW8 1640 aa15.52■□□□□ 0.08
EXTL3-202ENST00000454906 AQRO60306 1485 aaKnown RBP eCLIP15.49■□□□□ 0.07
EXTL3-202ENST00000454906 SOGA1O94964 1423 aa15.48■□□□□ 0.07
EXTL3-202ENST00000454906 TOP2BQ02880 1626 aa15.47■□□□□ 0.07
EXTL3-202ENST00000454906 DNAJC5Q9H3Z4 198 aa15.46■□□□□ 0.07
EXTL3-202ENST00000454906 WRNQ14191 1432 aaPredicted RBP eCLIP15.45■□□□□ 0.06
EXTL3-202ENST00000454906 TDRD9Q8NDG6 1382 aaKnown RBP15.43■□□□□ 0.06
EXTL3-202ENST00000454906 ABCA5Q8WWZ7 1642 aa15.39■□□□□ 0.05
EXTL3-202ENST00000454906 SNAPC4Q5SXM2 1469 aa15.38■□□□□ 0.05
EXTL3-202ENST00000454906 FBLN2P98095 1184 aa15.36■□□□□ 0.05
EXTL3-202ENST00000454906 ABCA10Q8WWZ4 1543 aa15.33■□□□□ 0.05
EXTL3-202ENST00000454906 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.04
EXTL3-202ENST00000454906 GRIN2BQ13224 1484 aa15.3■□□□□ 0.04
EXTL3-202ENST00000454906 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
EXTL3-202ENST00000454906 RIMBP3CA6NJZ7 1639 aa15.26■□□□□ 0.03
EXTL3-202ENST00000454906 RIMBP3BA6NNM3 1639 aa15.26■□□□□ 0.03
EXTL3-202ENST00000454906 RIMBP3Q9UFD9 1639 aa15.26■□□□□ 0.03
EXTL3-202ENST00000454906 OSCARQ8IYS5 282 aa15.26■□□□□ 0.03
EXTL3-202ENST00000454906 MAGI1Q96QZ7 1491 aaPredicted RBP15.25■□□□□ 0.03
EXTL3-202ENST00000454906 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
EXTL3-202ENST00000454906 CHMP7Q8WUX9 453 aaPredicted RBP15.2■□□□□ 0.02
EXTL3-202ENST00000454906 TRIM41Q8WV44 630 aa15.19■□□□□ 0.02
EXTL3-202ENST00000454906 ARHGEF11O15085 1522 aa15.17■□□□□ 0.02
EXTL3-202ENST00000454906 ERICH3Q5RHP9 1530 aa15.16■□□□□ 0.02
EXTL3-202ENST00000454906 CLASP1Q7Z460 1538 aa15.16■□□□□ 0.02
EXTL3-202ENST00000454906 CEP170Q5SW79 1584 aa15.15■□□□□ 0.02
EXTL3-202ENST00000454906 GRIN2AQ12879 1464 aa15.14■□□□□ 0.01
EXTL3-202ENST00000454906 CUL7Q14999 1698 aa15.12■□□□□ 0.01
EXTL3-202ENST00000454906 KIF27Q86VH2 1401 aa15.09■□□□□ 0.01
EXTL3-202ENST00000454906 FHAD1B1AJZ9 1412 aa15.09■□□□□ 0.01
EXTL3-202ENST00000454906 RUSC2Q8N2Y8 1516 aa15.08■□□□□ 0.01
EXTL3-202ENST00000454906 ERCC6L2Q5T890 1561 aa15.07■□□□□ 0
EXTL3-202ENST00000454906 ARAP1Q96P48 1450 aa15.04■□□□□ -0
EXTL3-202ENST00000454906 SHROOM2Q13796 1616 aa15□□□□□ -0.01
EXTL3-202ENST00000454906 NUP160Q12769 1436 aa15□□□□□ -0.01
EXTL3-202ENST00000454906 CYB5RLQ6IPT4 315 aa14.99□□□□□ -0.01
EXTL3-202ENST00000454906 CTTNBP2Q8WZ74 1663 aa14.99□□□□□ -0.01
EXTL3-202ENST00000454906 IGF1RP08069 1367 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms