RNA–Protein interactions for RNA: ENST00000454220.6

PPP2R1A-203, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 1 (best)

Gene PPP2R1A, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-203ENST00000454220 NISCHQ9Y2I1 1504 aa37.26■■■■□ 3.56
PPP2R1A-203ENST00000454220 CCDC180Q9P1Z9 1646 aa33.42■■■□□ 2.94
PPP2R1A-203ENST00000454220 ABCC9O60706 1549 aa33.4■■■□□ 2.94
PPP2R1A-203ENST00000454220 RB1CC1Q8TDY2 1594 aa31.78■■■□□ 2.68
PPP2R1A-203ENST00000454220 NACADO15069 1562 aa31.52■■■□□ 2.64
PPP2R1A-203ENST00000454220 DNAJC5BQ9UF47 199 aa31.3■■■□□ 2.6
PPP2R1A-203ENST00000454220 DCAF8L2P0C7V8 631 aa31.24■■■□□ 2.59
PPP2R1A-203ENST00000454220 UNC13AQ9UPW8 1703 aa31.23■■■□□ 2.59
PPP2R1A-203ENST00000454220 ZCCHC6Q5VYS8 1495 aaKnown RBP31.09■■■□□ 2.57
PPP2R1A-203ENST00000454220 MYO15BQ96JP2 1530 aa31.03■■■□□ 2.56
PPP2R1A-203ENST00000454220 PABPN1Q86U42 306 aaKnown RBP eCLIP31.02■■■□□ 2.56
PPP2R1A-203ENST00000454220 BICRAQ9NZM4 1560 aa30.89■■■□□ 2.54
PPP2R1A-203ENST00000454220 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
PPP2R1A-203ENST00000454220 SCRIBQ14160 1630 aa30.47■■■□□ 2.47
PPP2R1A-203ENST00000454220 SHROOM4Q9ULL8 1493 aa30.4■■■□□ 2.46
PPP2R1A-203ENST00000454220 CC2D2AQ9P2K1 1620 aa30.22■■■□□ 2.43
PPP2R1A-203ENST00000454220 EIF4G1Q04637 1599 aaKnown RBP30.11■■■□□ 2.41
PPP2R1A-203ENST00000454220 CECR2Q9BXF3 1484 aa30.07■■■□□ 2.4
PPP2R1A-203ENST00000454220 NCAPD3P42695 1498 aa29.04■■■□□ 2.24
PPP2R1A-203ENST00000454220 SMARCA4P51532 1647 aa29.03■■■□□ 2.24
PPP2R1A-203ENST00000454220 ATAD2BQ9ULI0 1458 aa29■■■□□ 2.23
PPP2R1A-203ENST00000454220 SMARCA2P51531 1590 aa28.93■■■□□ 2.22
PPP2R1A-203ENST00000454220 HMGXB3Q12766 1538 aa28.92■■■□□ 2.22
PPP2R1A-203ENST00000454220 BAZ1AQ9NRL2 1556 aaPredicted RBP28.86■■■□□ 2.21
PPP2R1A-203ENST00000454220 ERCC6Q03468 1493 aa28.84■■■□□ 2.21
PPP2R1A-203ENST00000454220 CUX2O14529 1486 aa28.79■■■□□ 2.2
PPP2R1A-203ENST00000454220 BAZ1BQ9UIG0 1483 aaKnown RBP28.73■■■□□ 2.19
PPP2R1A-203ENST00000454220 DNAJC5Q9H3Z4 198 aa28.73■■■□□ 2.19
PPP2R1A-203ENST00000454220 PEG3Q9GZU2 1588 aa28.71■■■□□ 2.19
PPP2R1A-203ENST00000454220 MROH2BQ7Z745 1585 aa28.7■■■□□ 2.18
PPP2R1A-203ENST00000454220 NESP48681 1621 aa28.69■■■□□ 2.18
PPP2R1A-203ENST00000454220 RSF1Q96T23 1441 aaPredicted RBP28.5■■■□□ 2.15
PPP2R1A-203ENST00000454220 THOC2Q8NI27 1593 aaKnown RBP28.49■■■□□ 2.15
PPP2R1A-203ENST00000454220 LAMC3Q9Y6N6 1575 aa28.48■■■□□ 2.15
PPP2R1A-203ENST00000454220 KIF21AQ7Z4S6 1674 aa28.43■■■□□ 2.14
PPP2R1A-203ENST00000454220 WIZO95785 1651 aa28.39■■■□□ 2.14
PPP2R1A-203ENST00000454220 PDS5BQ9NTI5 1447 aa28.24■■■□□ 2.11
PPP2R1A-203ENST00000454220 CADPSQ9ULU8 1353 aa28.15■■■□□ 2.1
PPP2R1A-203ENST00000454220 TOP2AP11388 1531 aaKnown RBP28.13■■■□□ 2.09
PPP2R1A-203ENST00000454220 MRC2Q9UBG0 1479 aa28.07■■■□□ 2.08
PPP2R1A-203ENST00000454220 WDR62O43379 1518 aa28.02■■■□□ 2.08
PPP2R1A-203ENST00000454220 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
PPP2R1A-203ENST00000454220 CEP164Q9UPV0 1460 aa27.95■■■□□ 2.06
PPP2R1A-203ENST00000454220 FANCD2Q9BXW9 1451 aa27.9■■■□□ 2.06
PPP2R1A-203ENST00000454220 CFTRP13569 1480 aa27.85■■■□□ 2.05
PPP2R1A-203ENST00000454220 CCDC88BA6NC98 1476 aa27.81■■■□□ 2.04
PPP2R1A-203ENST00000454220 PRDM2Q13029 1718 aa27.78■■■□□ 2.04
PPP2R1A-203ENST00000454220 URB2Q14146 1524 aaKnown RBP27.71■■■□□ 2.03
PPP2R1A-203ENST00000454220 TRIM41Q8WV44 630 aa27.52■■■□□ 2
PPP2R1A-203ENST00000454220 TOPBP1Q92547 1522 aa27.38■■□□□ 1.97
PPP2R1A-203ENST00000454220 ZNF608Q9ULD9 1512 aaPredicted RBP27.36■■□□□ 1.97
PPP2R1A-203ENST00000454220 IFT140Q96RY7 1462 aa27.36■■□□□ 1.97
PPP2R1A-203ENST00000454220 OSCARQ8IYS5 282 aa27.35■■□□□ 1.97
PPP2R1A-203ENST00000454220 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
PPP2R1A-203ENST00000454220 EIF4G3O43432 1585 aaKnown RBP27.28■■□□□ 1.96
PPP2R1A-203ENST00000454220 ABCC8Q09428 1581 aa27.25■■□□□ 1.95
PPP2R1A-203ENST00000454220 RIMBP3CA6NJZ7 1639 aa27.2■■□□□ 1.95
PPP2R1A-203ENST00000454220 RIMBP3BA6NNM3 1639 aa27.2■■□□□ 1.95
PPP2R1A-203ENST00000454220 RIMBP3Q9UFD9 1639 aa27.2■■□□□ 1.95
PPP2R1A-203ENST00000454220 TARBP1Q13395 1621 aaKnown RBP27.18■■□□□ 1.94
PPP2R1A-203ENST00000454220 CHD1O14646 1710 aa27.13■■□□□ 1.93
PPP2R1A-203ENST00000454220 POLA1P09884 1462 aaPredicted RBP27.09■■□□□ 1.93
PPP2R1A-203ENST00000454220 AQRO60306 1485 aaKnown RBP eCLIP27.06■■□□□ 1.922e-7■■■■■ 34.1
PPP2R1A-203ENST00000454220 ARHGEF11O15085 1522 aa27.06■■□□□ 1.92
PPP2R1A-203ENST00000454220 RAD54L2Q9Y4B4 1467 aa27■■□□□ 1.91
PPP2R1A-203ENST00000454220 FGD5Q6ZNL6 1462 aa26.93■■□□□ 1.9
PPP2R1A-203ENST00000454220 CUX1P39880 1505 aa26.92■■□□□ 1.9
PPP2R1A-203ENST00000454220 SOGA1O94964 1423 aa26.9■■□□□ 1.9
PPP2R1A-203ENST00000454220 WDR97A6NE52 1622 aa26.88■■□□□ 1.89
PPP2R1A-203ENST00000454220 TDRD9Q8NDG6 1382 aaKnown RBP26.86■■□□□ 1.89
PPP2R1A-203ENST00000454220 WRNQ14191 1432 aaPredicted RBP eCLIP26.86■■□□□ 1.89
PPP2R1A-203ENST00000454220 FBLN2P98095 1184 aa26.85■■□□□ 1.89
PPP2R1A-203ENST00000454220 SNAPC4Q5SXM2 1469 aa26.84■■□□□ 1.89
PPP2R1A-203ENST00000454220 ARAP1Q96P48 1450 aa26.8■■□□□ 1.88
PPP2R1A-203ENST00000454220 TOP2BQ02880 1626 aa26.77■■□□□ 1.88
PPP2R1A-203ENST00000454220 PBRM1Q86U86 1689 aa26.76■■□□□ 1.87
PPP2R1A-203ENST00000454220 BIVM-ERCC5R4GMW8 1640 aa26.76■■□□□ 1.87
PPP2R1A-203ENST00000454220 CYB5RLQ6IPT4 315 aa26.75■■□□□ 1.87
PPP2R1A-203ENST00000454220 SYNJ1O43426 1573 aa26.75■■□□□ 1.87
PPP2R1A-203ENST00000454220 CLASP1Q7Z460 1538 aa26.74■■□□□ 1.87
PPP2R1A-203ENST00000454220 MAGI1Q96QZ7 1491 aaPredicted RBP26.74■■□□□ 1.87
PPP2R1A-203ENST00000454220 GRIN2BQ13224 1484 aa26.71■■□□□ 1.87
PPP2R1A-203ENST00000454220 ABCA5Q8WWZ7 1642 aa26.64■■□□□ 1.85
PPP2R1A-203ENST00000454220 SYNJ2O15056 1496 aa26.63■■□□□ 1.85
PPP2R1A-203ENST00000454220 CHMP7Q8WUX9 453 aaPredicted RBP26.62■■□□□ 1.85
PPP2R1A-203ENST00000454220 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
PPP2R1A-203ENST00000454220 ABCA10Q8WWZ4 1543 aa26.6■■□□□ 1.85
PPP2R1A-203ENST00000454220 TRHP20396 242 aaPredicted RBP26.48■■□□□ 1.83
PPP2R1A-203ENST00000454220 ADAMTS12P58397 1594 aa26.45■■□□□ 1.82
PPP2R1A-203ENST00000454220 GRIN2AQ12879 1464 aa26.39■■□□□ 1.82
PPP2R1A-203ENST00000454220 CEP170Q5SW79 1584 aa26.36■■□□□ 1.81
PPP2R1A-203ENST00000454220 ERCC6L2Q5T890 1561 aa26.33■■□□□ 1.81
PPP2R1A-203ENST00000454220 CHIC1Q5VXU3 224 aa26.31■■□□□ 1.8
PPP2R1A-203ENST00000454220 NUP160Q12769 1436 aa26.3■■□□□ 1.8
PPP2R1A-203ENST00000454220 KIF27Q86VH2 1401 aa26.29■■□□□ 1.8
PPP2R1A-203ENST00000454220 ERICH3Q5RHP9 1530 aa26.27■■□□□ 1.8
PPP2R1A-203ENST00000454220 FHAD1B1AJZ9 1412 aa26.26■■□□□ 1.79
PPP2R1A-203ENST00000454220 SHROOM2Q13796 1616 aa26.25■■□□□ 1.79
PPP2R1A-203ENST00000454220 IGF1RP08069 1367 aa26.16■■□□□ 1.78
PPP2R1A-203ENST00000454220 RUSC2Q8N2Y8 1516 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms