RNA–Protein interactions for RNA: ENST00000454195.1

NDUFS1-206, Transcript of NADH:ubiquinone oxidoreductase core subunit S1, humanhuman

TSL 4

Gene NDUFS1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS1-206ENST00000454195 NISCHQ9Y2I1 1504 aa31.4■■■□□ 2.62
NDUFS1-206ENST00000454195 ABCC9O60706 1549 aa28.59■■■□□ 2.17
NDUFS1-206ENST00000454195 CCDC180Q9P1Z9 1646 aa28.34■■■□□ 2.13
NDUFS1-206ENST00000454195 RB1CC1Q8TDY2 1594 aa27.17■■□□□ 1.94
NDUFS1-206ENST00000454195 DNAJC5BQ9UF47 199 aa27.04■■□□□ 1.92
NDUFS1-206ENST00000454195 NACADO15069 1562 aa26.92■■□□□ 1.9
NDUFS1-206ENST00000454195 DCAF8L2P0C7V8 631 aa26.69■■□□□ 1.86
NDUFS1-206ENST00000454195 PABPN1Q86U42 306 aaKnown RBP eCLIP26.57■■□□□ 1.84
NDUFS1-206ENST00000454195 MYO15BQ96JP2 1530 aa26.46■■□□□ 1.83
NDUFS1-206ENST00000454195 UNC13AQ9UPW8 1703 aa26.39■■□□□ 1.81
NDUFS1-206ENST00000454195 BICRAQ9NZM4 1560 aa26.25■■□□□ 1.79
NDUFS1-206ENST00000454195 SHROOM4Q9ULL8 1493 aa26.07■■□□□ 1.76
NDUFS1-206ENST00000454195 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
NDUFS1-206ENST00000454195 ZCCHC6Q5VYS8 1495 aaKnown RBP25.95■■□□□ 1.74
NDUFS1-206ENST00000454195 CECR2Q9BXF3 1484 aa25.85■■□□□ 1.73
NDUFS1-206ENST00000454195 CC2D2AQ9P2K1 1620 aa25.82■■□□□ 1.72
NDUFS1-206ENST00000454195 SCRIBQ14160 1630 aa25.73■■□□□ 1.71
NDUFS1-206ENST00000454195 EIF4G1Q04637 1599 aaKnown RBP25.7■■□□□ 1.71
NDUFS1-206ENST00000454195 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.62
NDUFS1-206ENST00000454195 CUX2O14529 1486 aa24.89■■□□□ 1.57
NDUFS1-206ENST00000454195 NCAPD3P42695 1498 aa24.83■■□□□ 1.57
NDUFS1-206ENST00000454195 ERCC6Q03468 1493 aa24.81■■□□□ 1.56
NDUFS1-206ENST00000454195 ATAD2BQ9ULI0 1458 aa24.68■■□□□ 1.54
NDUFS1-206ENST00000454195 SMARCA2P51531 1590 aa24.65■■□□□ 1.54
NDUFS1-206ENST00000454195 HMGXB3Q12766 1538 aa24.61■■□□□ 1.53
NDUFS1-206ENST00000454195 SMARCA4P51532 1647 aa24.54■■□□□ 1.52
NDUFS1-206ENST00000454195 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.51
NDUFS1-206ENST00000454195 BAZ1AQ9NRL2 1556 aaPredicted RBP24.45■■□□□ 1.5
NDUFS1-206ENST00000454195 NESP48681 1621 aa24.43■■□□□ 1.5
NDUFS1-206ENST00000454195 PEG3Q9GZU2 1588 aa24.34■■□□□ 1.49
NDUFS1-206ENST00000454195 LAMC3Q9Y6N6 1575 aa24.33■■□□□ 1.49
NDUFS1-206ENST00000454195 THOC2Q8NI27 1593 aaKnown RBP24.27■■□□□ 1.48
NDUFS1-206ENST00000454195 PDS5BQ9NTI5 1447 aa24.26■■□□□ 1.47
NDUFS1-206ENST00000454195 MROH2BQ7Z745 1585 aa24.13■■□□□ 1.45
NDUFS1-206ENST00000454195 KIF21AQ7Z4S6 1674 aa24.1■■□□□ 1.45
NDUFS1-206ENST00000454195 CADPSQ9ULU8 1353 aa24.07■■□□□ 1.44
NDUFS1-206ENST00000454195 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
NDUFS1-206ENST00000454195 TRIM41Q8WV44 630 aa23.95■■□□□ 1.42
NDUFS1-206ENST00000454195 WDR62O43379 1518 aa23.93■■□□□ 1.42
NDUFS1-206ENST00000454195 CEP164Q9UPV0 1460 aa23.85■■□□□ 1.41
NDUFS1-206ENST00000454195 WIZO95785 1651 aa23.81■■□□□ 1.4
NDUFS1-206ENST00000454195 FANCD2Q9BXW9 1451 aa23.77■■□□□ 1.4
NDUFS1-206ENST00000454195 OSCARQ8IYS5 282 aa23.72■■□□□ 1.39
NDUFS1-206ENST00000454195 CFTRP13569 1480 aa23.71■■□□□ 1.39
NDUFS1-206ENST00000454195 TOP2AP11388 1531 aaKnown RBP23.57■■□□□ 1.36
NDUFS1-206ENST00000454195 RSF1Q96T23 1441 aaPredicted RBP23.56■■□□□ 1.36
NDUFS1-206ENST00000454195 URB2Q14146 1524 aaKnown RBP23.54■■□□□ 1.36
NDUFS1-206ENST00000454195 IFT140Q96RY7 1462 aa23.41■■□□□ 1.34
NDUFS1-206ENST00000454195 PRDM2Q13029 1718 aa23.4■■□□□ 1.34
NDUFS1-206ENST00000454195 ABCC8Q09428 1581 aa23.33■■□□□ 1.33
NDUFS1-206ENST00000454195 RIMBP3CA6NJZ7 1639 aa23.32■■□□□ 1.32
NDUFS1-206ENST00000454195 RIMBP3BA6NNM3 1639 aa23.32■■□□□ 1.32
NDUFS1-206ENST00000454195 RIMBP3Q9UFD9 1639 aa23.32■■□□□ 1.32
NDUFS1-206ENST00000454195 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
NDUFS1-206ENST00000454195 CCDC88BA6NC98 1476 aa23.28■■□□□ 1.32
NDUFS1-206ENST00000454195 TOPBP1Q92547 1522 aa23.27■■□□□ 1.32
NDUFS1-206ENST00000454195 ARHGEF11O15085 1522 aa23.24■■□□□ 1.31
NDUFS1-206ENST00000454195 DNMBPQ6XZF7 1577 aa23.17■■□□□ 1.3
NDUFS1-206ENST00000454195 EIF4G3O43432 1585 aaKnown RBP23.16■■□□□ 1.3
NDUFS1-206ENST00000454195 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
NDUFS1-206ENST00000454195 AQRO60306 1485 aaKnown RBP eCLIP23.07■■□□□ 1.288e-6■■■■□ 23.2
NDUFS1-206ENST00000454195 FBLN2P98095 1184 aa23.06■■□□□ 1.28
NDUFS1-206ENST00000454195 TARBP1Q13395 1621 aaKnown RBP23.04■■□□□ 1.28
NDUFS1-206ENST00000454195 TRHP20396 242 aaPredicted RBP23.02■■□□□ 1.28
NDUFS1-206ENST00000454195 CHD1O14646 1710 aa23.02■■□□□ 1.28
NDUFS1-206ENST00000454195 POLA1P09884 1462 aaPredicted RBP23■■□□□ 1.27
NDUFS1-206ENST00000454195 ARAP1Q96P48 1450 aa22.96■■□□□ 1.27
NDUFS1-206ENST00000454195 SOGA1O94964 1423 aa22.94■■□□□ 1.26
NDUFS1-206ENST00000454195 WDR97A6NE52 1622 aa22.92■■□□□ 1.26
NDUFS1-206ENST00000454195 RAD54L2Q9Y4B4 1467 aa22.89■■□□□ 1.25
NDUFS1-206ENST00000454195 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.25
NDUFS1-206ENST00000454195 CHMP7Q8WUX9 453 aaPredicted RBP22.88■■□□□ 1.25
NDUFS1-206ENST00000454195 SNAPC4Q5SXM2 1469 aa22.84■■□□□ 1.25
NDUFS1-206ENST00000454195 MAGI1Q96QZ7 1491 aaPredicted RBP22.83■■□□□ 1.25
NDUFS1-206ENST00000454195 SYNJ1O43426 1573 aa22.83■■□□□ 1.25
NDUFS1-206ENST00000454195 FGD5Q6ZNL6 1462 aa22.81■■□□□ 1.24
NDUFS1-206ENST00000454195 GRIN2BQ13224 1484 aa22.79■■□□□ 1.24
NDUFS1-206ENST00000454195 CLASP1Q7Z460 1538 aa22.78■■□□□ 1.24
NDUFS1-206ENST00000454195 SYNJ2O15056 1496 aa22.74■■□□□ 1.23
NDUFS1-206ENST00000454195 CUX1P39880 1505 aa22.71■■□□□ 1.23
NDUFS1-206ENST00000454195 AEBP2Q6ZN18 517 aaPredicted RBP22.65■■□□□ 1.22
NDUFS1-206ENST00000454195 GAPVD1Q14C86 1478 aa22.65■■□□□ 1.22
NDUFS1-206ENST00000454195 PBRM1Q86U86 1689 aa22.58■■□□□ 1.21
NDUFS1-206ENST00000454195 ABCA10Q8WWZ4 1543 aa22.57■■□□□ 1.2
NDUFS1-206ENST00000454195 ABCA5Q8WWZ7 1642 aa22.51■■□□□ 1.19
NDUFS1-206ENST00000454195 WRNQ14191 1432 aaPredicted RBP eCLIP22.47■■□□□ 1.19
NDUFS1-206ENST00000454195 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
NDUFS1-206ENST00000454195 NUP160Q12769 1436 aa22.4■■□□□ 1.18
NDUFS1-206ENST00000454195 FHAD1B1AJZ9 1412 aa22.38■■□□□ 1.17
NDUFS1-206ENST00000454195 ADAMTS12P58397 1594 aa22.38■■□□□ 1.17
NDUFS1-206ENST00000454195 CEP170Q5SW79 1584 aa22.36■■□□□ 1.17
NDUFS1-206ENST00000454195 ERCC6L2Q5T890 1561 aa22.32■■□□□ 1.16
NDUFS1-206ENST00000454195 SUPT5HO00267 1087 aaKnown RBP22.3■■□□□ 1.16
NDUFS1-206ENST00000454195 TOP2BQ02880 1626 aa22.3■■□□□ 1.16
NDUFS1-206ENST00000454195 SHROOM2Q13796 1616 aa22.3■■□□□ 1.16
NDUFS1-206ENST00000454195 ERICH3Q5RHP9 1530 aa22.3■■□□□ 1.16
NDUFS1-206ENST00000454195 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
NDUFS1-206ENST00000454195 PRG4Q92954 1404 aaPredicted RBP22.23■■□□□ 1.15
NDUFS1-206ENST00000454195 JPH4Q96JJ6 628 aa22.22■■□□□ 1.15
NDUFS1-206ENST00000454195 NPM1P06748 294 aaKnown RBP eCLIP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms