RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 NISCHQ9Y2I1 1504 aa22.46■■□□□ 1.19
DEPDC1B-202ENST00000453022 CCDC180Q9P1Z9 1646 aa20.26■□□□□ 0.83
DEPDC1B-202ENST00000453022 ABCC9O60706 1549 aa20.23■□□□□ 0.83
DEPDC1B-202ENST00000453022 RB1CC1Q8TDY2 1594 aa19.25■□□□□ 0.67
DEPDC1B-202ENST00000453022 NACADO15069 1562 aa19.1■□□□□ 0.65
DEPDC1B-202ENST00000453022 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
DEPDC1B-202ENST00000453022 UNC13AQ9UPW8 1703 aa18.95■□□□□ 0.62
DEPDC1B-202ENST00000453022 DCAF8L2P0C7V8 631 aa18.85■□□□□ 0.61
DEPDC1B-202ENST00000453022 MYO15BQ96JP2 1530 aa18.82■□□□□ 0.6
DEPDC1B-202ENST00000453022 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.59
DEPDC1B-202ENST00000453022 BICRAQ9NZM4 1560 aa18.74■□□□□ 0.59
DEPDC1B-202ENST00000453022 ZCCHC6Q5VYS8 1495 aaKnown RBP18.62■□□□□ 0.57
DEPDC1B-202ENST00000453022 DCAF1Q9Y4B6 1507 aa18.56■□□□□ 0.56
DEPDC1B-202ENST00000453022 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
DEPDC1B-202ENST00000453022 SHROOM4Q9ULL8 1493 aa18.42■□□□□ 0.54
DEPDC1B-202ENST00000453022 CC2D2AQ9P2K1 1620 aa18.32■□□□□ 0.52
DEPDC1B-202ENST00000453022 AEBP2Q6ZN18 517 aaPredicted RBP18.29■□□□□ 0.52
DEPDC1B-202ENST00000453022 EIF4G1Q04637 1599 aaKnown RBP18.26■□□□□ 0.51
DEPDC1B-202ENST00000453022 CECR2Q9BXF3 1484 aa18.21■□□□□ 0.51
DEPDC1B-202ENST00000453022 NCAPD3P42695 1498 aa17.61■□□□□ 0.41
DEPDC1B-202ENST00000453022 SMARCA4P51532 1647 aa17.58■□□□□ 0.4
DEPDC1B-202ENST00000453022 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
DEPDC1B-202ENST00000453022 CHIC1Q5VXU3 224 aa17.52■□□□□ 0.39
DEPDC1B-202ENST00000453022 HMGXB3Q12766 1538 aa17.52■□□□□ 0.39
DEPDC1B-202ENST00000453022 SMARCA2P51531 1590 aa17.5■□□□□ 0.39
DEPDC1B-202ENST00000453022 CUX2O14529 1486 aa17.46■□□□□ 0.39
DEPDC1B-202ENST00000453022 DNAJC5Q9H3Z4 198 aa17.45■□□□□ 0.38
DEPDC1B-202ENST00000453022 BAZ1AQ9NRL2 1556 aaPredicted RBP17.44■□□□□ 0.38
DEPDC1B-202ENST00000453022 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
DEPDC1B-202ENST00000453022 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
DEPDC1B-202ENST00000453022 NESP48681 1621 aa17.38■□□□□ 0.37
DEPDC1B-202ENST00000453022 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
DEPDC1B-202ENST00000453022 MROH2BQ7Z745 1585 aa17.32■□□□□ 0.36
DEPDC1B-202ENST00000453022 THOC2Q8NI27 1593 aaKnown RBP17.28■□□□□ 0.36
DEPDC1B-202ENST00000453022 LAMC3Q9Y6N6 1575 aa17.26■□□□□ 0.35
DEPDC1B-202ENST00000453022 KIF21AQ7Z4S6 1674 aa17.24■□□□□ 0.35
DEPDC1B-202ENST00000453022 WIZO95785 1651 aa17.14■□□□□ 0.33
DEPDC1B-202ENST00000453022 PDS5BQ9NTI5 1447 aa17.09■□□□□ 0.33
DEPDC1B-202ENST00000453022 CADPSQ9ULU8 1353 aa17.04■□□□□ 0.32
DEPDC1B-202ENST00000453022 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
DEPDC1B-202ENST00000453022 WDR62O43379 1518 aa16.99■□□□□ 0.31
DEPDC1B-202ENST00000453022 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
DEPDC1B-202ENST00000453022 RSF1Q96T23 1441 aaPredicted RBP16.91■□□□□ 0.3
DEPDC1B-202ENST00000453022 TOP2AP11388 1531 aaKnown RBP16.89■□□□□ 0.29
DEPDC1B-202ENST00000453022 FANCD2Q9BXW9 1451 aa16.88■□□□□ 0.29
DEPDC1B-202ENST00000453022 CFTRP13569 1480 aa16.87■□□□□ 0.29
DEPDC1B-202ENST00000453022 PRDM2Q13029 1718 aa16.83■□□□□ 0.28
DEPDC1B-202ENST00000453022 URB2Q14146 1524 aaKnown RBP16.78■□□□□ 0.28
DEPDC1B-202ENST00000453022 CCDC88BA6NC98 1476 aa16.68■□□□□ 0.26
DEPDC1B-202ENST00000453022 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
DEPDC1B-202ENST00000453022 TOPBP1Q92547 1522 aa16.58■□□□□ 0.24
DEPDC1B-202ENST00000453022 ZNF608Q9ULD9 1512 aaPredicted RBP16.57■□□□□ 0.24
DEPDC1B-202ENST00000453022 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
DEPDC1B-202ENST00000453022 IFT140Q96RY7 1462 aa16.56■□□□□ 0.24
DEPDC1B-202ENST00000453022 EIF4G3O43432 1585 aaKnown RBP16.53■□□□□ 0.24
DEPDC1B-202ENST00000453022 DNMBPQ6XZF7 1577 aa16.52■□□□□ 0.24
DEPDC1B-202ENST00000453022 RIMBP3CA6NJZ7 1639 aa16.5■□□□□ 0.23
DEPDC1B-202ENST00000453022 RIMBP3BA6NNM3 1639 aa16.5■□□□□ 0.23
DEPDC1B-202ENST00000453022 RIMBP3Q9UFD9 1639 aa16.5■□□□□ 0.23
DEPDC1B-202ENST00000453022 ABCC8Q09428 1581 aa16.49■□□□□ 0.23
DEPDC1B-202ENST00000453022 TARBP1Q13395 1621 aaKnown RBP16.48■□□□□ 0.23
DEPDC1B-202ENST00000453022 CHD1O14646 1710 aa16.44■□□□□ 0.22
DEPDC1B-202ENST00000453022 ARHGEF11O15085 1522 aa16.4■□□□□ 0.22
DEPDC1B-202ENST00000453022 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
DEPDC1B-202ENST00000453022 AQRO60306 1485 aaKnown RBP eCLIP16.38■□□□□ 0.212e-7■■■■■ 29
DEPDC1B-202ENST00000453022 RAD54L2Q9Y4B4 1467 aa16.33■□□□□ 0.2
DEPDC1B-202ENST00000453022 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
DEPDC1B-202ENST00000453022 CUX1P39880 1505 aa16.28■□□□□ 0.2
DEPDC1B-202ENST00000453022 WDR97A6NE52 1622 aa16.28■□□□□ 0.2
DEPDC1B-202ENST00000453022 SOGA1O94964 1423 aa16.27■□□□□ 0.19
DEPDC1B-202ENST00000453022 TDRD9Q8NDG6 1382 aaKnown RBP16.24■□□□□ 0.19
DEPDC1B-202ENST00000453022 ARAP1Q96P48 1450 aa16.24■□□□□ 0.19
DEPDC1B-202ENST00000453022 SNAPC4Q5SXM2 1469 aa16.23■□□□□ 0.19
DEPDC1B-202ENST00000453022 CLASP1Q7Z460 1538 aa16.21■□□□□ 0.19
DEPDC1B-202ENST00000453022 FBLN2P98095 1184 aa16.21■□□□□ 0.18
DEPDC1B-202ENST00000453022 PBRM1Q86U86 1689 aa16.21■□□□□ 0.18
DEPDC1B-202ENST00000453022 CYB5RLQ6IPT4 315 aa16.19■□□□□ 0.18
DEPDC1B-202ENST00000453022 MAGI1Q96QZ7 1491 aaPredicted RBP16.18■□□□□ 0.18
DEPDC1B-202ENST00000453022 GRIN2BQ13224 1484 aa16.16■□□□□ 0.18
DEPDC1B-202ENST00000453022 SYNJ1O43426 1573 aa16.15■□□□□ 0.18
DEPDC1B-202ENST00000453022 ABCA5Q8WWZ7 1642 aa16.13■□□□□ 0.17
DEPDC1B-202ENST00000453022 SYNJ2O15056 1496 aa16.12■□□□□ 0.17
DEPDC1B-202ENST00000453022 ABCA10Q8WWZ4 1543 aa16.09■□□□□ 0.17
DEPDC1B-202ENST00000453022 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
DEPDC1B-202ENST00000453022 CHMP7Q8WUX9 453 aaPredicted RBP16.09■□□□□ 0.17
DEPDC1B-202ENST00000453022 BIVM-ERCC5R4GMW8 1640 aa16.04■□□□□ 0.16
DEPDC1B-202ENST00000453022 SUPT5HO00267 1087 aaKnown RBP16.03■□□□□ 0.16
DEPDC1B-202ENST00000453022 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
DEPDC1B-202ENST00000453022 TRHP20396 242 aaPredicted RBP16.01■□□□□ 0.15
DEPDC1B-202ENST00000453022 ADAMTS12P58397 1594 aa16.01■□□□□ 0.15
DEPDC1B-202ENST00000453022 GRIN2AQ12879 1464 aa15.98■□□□□ 0.15
DEPDC1B-202ENST00000453022 WRNQ14191 1432 aaPredicted RBP eCLIP15.97■□□□□ 0.15
DEPDC1B-202ENST00000453022 CEP170Q5SW79 1584 aa15.96■□□□□ 0.15
DEPDC1B-202ENST00000453022 ERCC6L2Q5T890 1561 aa15.96■□□□□ 0.15
DEPDC1B-202ENST00000453022 NUP160Q12769 1436 aa15.92■□□□□ 0.14
DEPDC1B-202ENST00000453022 SHROOM2Q13796 1616 aa15.92■□□□□ 0.14
DEPDC1B-202ENST00000453022 ERICH3Q5RHP9 1530 aa15.89■□□□□ 0.13
DEPDC1B-202ENST00000453022 FHAD1B1AJZ9 1412 aa15.88■□□□□ 0.13
DEPDC1B-202ENST00000453022 RUSC2Q8N2Y8 1516 aa15.8■□□□□ 0.12
DEPDC1B-202ENST00000453022 KIF13AQ9H1H9 1805 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms