RNA–Protein interactions for RNA: ENST00000452374.6

COMMD9-203, Transcript of COMM domain containing 9, humanhuman

TSL 2 BASIC

Gene COMMD9, Length 917 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-203ENST00000452374 NISCHQ9Y2I1 1504 aa27.3■■□□□ 1.96
COMMD9-203ENST00000452374 CCDC180Q9P1Z9 1646 aa24.5■■□□□ 1.51
COMMD9-203ENST00000452374 AEBP2Q6ZN18 517 aaPredicted RBP24.42■■□□□ 1.5
COMMD9-203ENST00000452374 ABCC9O60706 1549 aa24.09■■□□□ 1.45
COMMD9-203ENST00000452374 RB1CC1Q8TDY2 1594 aa23.17■■□□□ 1.3
COMMD9-203ENST00000452374 NACADO15069 1562 aa23.08■■□□□ 1.29
COMMD9-203ENST00000452374 MYO15BQ96JP2 1530 aa22.88■■□□□ 1.25
COMMD9-203ENST00000452374 CHIC1Q5VXU3 224 aa22.84■■□□□ 1.25
COMMD9-203ENST00000452374 DCAF8L2P0C7V8 631 aa22.82■■□□□ 1.24
COMMD9-203ENST00000452374 ZCCHC6Q5VYS8 1495 aaKnown RBP22.68■■□□□ 1.22
COMMD9-203ENST00000452374 DCAF1Q9Y4B6 1507 aa22.65■■□□□ 1.22
COMMD9-203ENST00000452374 UNC13AQ9UPW8 1703 aa22.63■■□□□ 1.21
COMMD9-203ENST00000452374 PABPN1Q86U42 306 aaKnown RBP eCLIP22.4■■□□□ 1.18
COMMD9-203ENST00000452374 BICRAQ9NZM4 1560 aa22.4■■□□□ 1.18
COMMD9-203ENST00000452374 DNAJC5BQ9UF47 199 aa22.3■■□□□ 1.16
COMMD9-203ENST00000452374 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
COMMD9-203ENST00000452374 SCRIBQ14160 1630 aa22.2■■□□□ 1.14
COMMD9-203ENST00000452374 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
COMMD9-203ENST00000452374 CC2D2AQ9P2K1 1620 aa21.84■■□□□ 1.09
COMMD9-203ENST00000452374 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
COMMD9-203ENST00000452374 NCAPD3P42695 1498 aa21.26■□□□□ 0.99
COMMD9-203ENST00000452374 SMARCA4P51532 1647 aa21.26■□□□□ 0.99
COMMD9-203ENST00000452374 SMARCA2P51531 1590 aa21.22■□□□□ 0.99
COMMD9-203ENST00000452374 BAZ1AQ9NRL2 1556 aaPredicted RBP21.22■□□□□ 0.99
COMMD9-203ENST00000452374 ATAD2BQ9ULI0 1458 aa21.19■□□□□ 0.98
COMMD9-203ENST00000452374 HMGXB3Q12766 1538 aa21.16■□□□□ 0.98
COMMD9-203ENST00000452374 PEG3Q9GZU2 1588 aa21.1■□□□□ 0.97
COMMD9-203ENST00000452374 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
COMMD9-203ENST00000452374 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
COMMD9-203ENST00000452374 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
COMMD9-203ENST00000452374 ERCC6Q03468 1493 aa20.84■□□□□ 0.93
COMMD9-203ENST00000452374 CUX2O14529 1486 aa20.79■□□□□ 0.92
COMMD9-203ENST00000452374 LAMC3Q9Y6N6 1575 aa20.79■□□□□ 0.92
COMMD9-203ENST00000452374 WIZO95785 1651 aa20.76■□□□□ 0.91
COMMD9-203ENST00000452374 NESP48681 1621 aa20.74■□□□□ 0.91
COMMD9-203ENST00000452374 RSF1Q96T23 1441 aaPredicted RBP20.63■□□□□ 0.89
COMMD9-203ENST00000452374 PDS5BQ9NTI5 1447 aa20.62■□□□□ 0.89
COMMD9-203ENST00000452374 CADPSQ9ULU8 1353 aa20.59■□□□□ 0.89
COMMD9-203ENST00000452374 PHF23Q9BUL5 403 aaPredicted RBP20.59■□□□□ 0.89
COMMD9-203ENST00000452374 THOC2Q8NI27 1593 aaKnown RBP20.58■□□□□ 0.88
COMMD9-203ENST00000452374 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.88
COMMD9-203ENST00000452374 TOP2AP11388 1531 aaKnown RBP20.57■□□□□ 0.88
COMMD9-203ENST00000452374 DNAJC5Q9H3Z4 198 aa20.43■□□□□ 0.86
COMMD9-203ENST00000452374 CFTRP13569 1480 aa20.43■□□□□ 0.86
COMMD9-203ENST00000452374 MRC2Q9UBG0 1479 aa20.41■□□□□ 0.86
COMMD9-203ENST00000452374 CEP164Q9UPV0 1460 aa20.38■□□□□ 0.85
COMMD9-203ENST00000452374 WDR62O43379 1518 aa20.37■□□□□ 0.85
COMMD9-203ENST00000452374 FANCD2Q9BXW9 1451 aa20.36■□□□□ 0.85
COMMD9-203ENST00000452374 PRDM2Q13029 1718 aa20.36■□□□□ 0.85
COMMD9-203ENST00000452374 CCDC88BA6NC98 1476 aa20.27■□□□□ 0.84
COMMD9-203ENST00000452374 URB2Q14146 1524 aaKnown RBP20.14■□□□□ 0.81
COMMD9-203ENST00000452374 ABCC8Q09428 1581 aa20.08■□□□□ 0.8
COMMD9-203ENST00000452374 TOPBP1Q92547 1522 aa20■□□□□ 0.79
COMMD9-203ENST00000452374 DNMBPQ6XZF7 1577 aa19.98■□□□□ 0.79
COMMD9-203ENST00000452374 IFT140Q96RY7 1462 aa19.98■□□□□ 0.79
COMMD9-203ENST00000452374 ZNF608Q9ULD9 1512 aaPredicted RBP19.82■□□□□ 0.76
COMMD9-203ENST00000452374 OSCARQ8IYS5 282 aa19.82■□□□□ 0.76
COMMD9-203ENST00000452374 TARBP1Q13395 1621 aaKnown RBP19.82■□□□□ 0.76
COMMD9-203ENST00000452374 SUPT5HO00267 1087 aaKnown RBP19.81■□□□□ 0.76
COMMD9-203ENST00000452374 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
COMMD9-203ENST00000452374 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
COMMD9-203ENST00000452374 WDR97A6NE52 1622 aa19.76■□□□□ 0.75
COMMD9-203ENST00000452374 SOGA1O94964 1423 aa19.71■□□□□ 0.75
COMMD9-203ENST00000452374 CUX1P39880 1505 aa19.71■□□□□ 0.75
COMMD9-203ENST00000452374 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
COMMD9-203ENST00000452374 AQRO60306 1485 aaKnown RBP eCLIP19.68■□□□□ 0.74
COMMD9-203ENST00000452374 RAD54L2Q9Y4B4 1467 aa19.67■□□□□ 0.74
COMMD9-203ENST00000452374 FOXD1Q16676 465 aa19.64■□□□□ 0.73
COMMD9-203ENST00000452374 CHD1O14646 1710 aa19.63■□□□□ 0.73
COMMD9-203ENST00000452374 TDRD9Q8NDG6 1382 aaKnown RBP19.58■□□□□ 0.73
COMMD9-203ENST00000452374 POTEDQ86YR6 584 aa19.56■□□□□ 0.72
COMMD9-203ENST00000452374 MAGI1Q96QZ7 1491 aaPredicted RBP19.55■□□□□ 0.72
COMMD9-203ENST00000452374 TRIM41Q8WV44 630 aa19.55■□□□□ 0.72
COMMD9-203ENST00000452374 GRIN2BQ13224 1484 aa19.54■□□□□ 0.72
COMMD9-203ENST00000452374 ABCA10Q8WWZ4 1543 aa19.54■□□□□ 0.72
COMMD9-203ENST00000452374 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
COMMD9-203ENST00000452374 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
COMMD9-203ENST00000452374 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
COMMD9-203ENST00000452374 BIVM-ERCC5R4GMW8 1640 aa19.54■□□□□ 0.72
COMMD9-203ENST00000452374 SNAPC4Q5SXM2 1469 aa19.53■□□□□ 0.72
COMMD9-203ENST00000452374 TOP2BQ02880 1626 aa19.52■□□□□ 0.72
COMMD9-203ENST00000452374 PBRM1Q86U86 1689 aa19.52■□□□□ 0.71
COMMD9-203ENST00000452374 ARHGEF11O15085 1522 aa19.5■□□□□ 0.71
COMMD9-203ENST00000452374 WRNQ14191 1432 aaPredicted RBP eCLIP19.5■□□□□ 0.71
COMMD9-203ENST00000452374 GAPVD1Q14C86 1478 aa19.49■□□□□ 0.71
COMMD9-203ENST00000452374 FBLN2P98095 1184 aa19.49■□□□□ 0.71
COMMD9-203ENST00000452374 ABCA5Q8WWZ7 1642 aa19.49■□□□□ 0.71
COMMD9-203ENST00000452374 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
COMMD9-203ENST00000452374 SYNJ2O15056 1496 aa19.46■□□□□ 0.71
COMMD9-203ENST00000452374 CHMP7Q8WUX9 453 aaPredicted RBP19.44■□□□□ 0.7
COMMD9-203ENST00000452374 CLASP1Q7Z460 1538 aa19.4■□□□□ 0.7
COMMD9-203ENST00000452374 ERICH3Q5RHP9 1530 aa19.32■□□□□ 0.68
COMMD9-203ENST00000452374 ADAMTS12P58397 1594 aa19.32■□□□□ 0.68
COMMD9-203ENST00000452374 GRIN2AQ12879 1464 aa19.29■□□□□ 0.68
COMMD9-203ENST00000452374 ARAP1Q96P48 1450 aa19.29■□□□□ 0.68
COMMD9-203ENST00000452374 CYB5RLQ6IPT4 315 aa19.28■□□□□ 0.68
COMMD9-203ENST00000452374 FHAD1B1AJZ9 1412 aa19.27■□□□□ 0.68
COMMD9-203ENST00000452374 NUP160Q12769 1436 aa19.22■□□□□ 0.67
COMMD9-203ENST00000452374 CEP170Q5SW79 1584 aa19.19■□□□□ 0.66
COMMD9-203ENST00000452374 KIF27Q86VH2 1401 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms