RNA–Protein interactions for RNA: ENST00000452193.5

SMARCA2-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-215ENST00000452193 NISCHQ9Y2I1 1504 aa28.7■■■□□ 2.19
SMARCA2-215ENST00000452193 AEBP2Q6ZN18 517 aaPredicted RBP26.06■■□□□ 1.76
SMARCA2-215ENST00000452193 CHIC1Q5VXU3 224 aa26■■□□□ 1.75
SMARCA2-215ENST00000452193 CCDC180Q9P1Z9 1646 aa25.62■■□□□ 1.69
SMARCA2-215ENST00000452193 ABCC9O60706 1549 aa25.58■■□□□ 1.68
SMARCA2-215ENST00000452193 RB1CC1Q8TDY2 1594 aa24.44■■□□□ 1.5
SMARCA2-215ENST00000452193 DCAF8L2P0C7V8 631 aa24.36■■□□□ 1.49
SMARCA2-215ENST00000452193 NACADO15069 1562 aa24.33■■□□□ 1.48
SMARCA2-215ENST00000452193 MYO15BQ96JP2 1530 aa24.06■■□□□ 1.44
SMARCA2-215ENST00000452193 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
SMARCA2-215ENST00000452193 DNAJC5BQ9UF47 199 aa23.9■■□□□ 1.42
SMARCA2-215ENST00000452193 ZCCHC6Q5VYS8 1495 aaKnown RBP23.77■■□□□ 1.4
SMARCA2-215ENST00000452193 DCAF1Q9Y4B6 1507 aa23.76■■□□□ 1.39
SMARCA2-215ENST00000452193 BICRAQ9NZM4 1560 aa23.57■■□□□ 1.36
SMARCA2-215ENST00000452193 UNC13AQ9UPW8 1703 aa23.57■■□□□ 1.36
SMARCA2-215ENST00000452193 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
SMARCA2-215ENST00000452193 SCRIBQ14160 1630 aa23.33■■□□□ 1.32
SMARCA2-215ENST00000452193 CECR2Q9BXF3 1484 aa23.09■■□□□ 1.29
SMARCA2-215ENST00000452193 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
SMARCA2-215ENST00000452193 CC2D2AQ9P2K1 1620 aa23.06■■□□□ 1.28
SMARCA2-215ENST00000452193 PHF23Q9BUL5 403 aaPredicted RBP23.01■■□□□ 1.27
SMARCA2-215ENST00000452193 NCAPD3P42695 1498 aa22.49■■□□□ 1.19
SMARCA2-215ENST00000452193 ATAD2BQ9ULI0 1458 aa22.39■■□□□ 1.17
SMARCA2-215ENST00000452193 SMARCA2P51531 1590 aa22.36■■□□□ 1.17
SMARCA2-215ENST00000452193 BAZ1AQ9NRL2 1556 aaPredicted RBP22.3■■□□□ 1.16
SMARCA2-215ENST00000452193 SMARCA4P51532 1647 aa22.29■■□□□ 1.16
SMARCA2-215ENST00000452193 HMGXB3Q12766 1538 aa22.25■■□□□ 1.15
SMARCA2-215ENST00000452193 BAZ1BQ9UIG0 1483 aaKnown RBP22.2■■□□□ 1.14
SMARCA2-215ENST00000452193 ERCC6Q03468 1493 aa22.18■■□□□ 1.14
SMARCA2-215ENST00000452193 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
SMARCA2-215ENST00000452193 CUX2O14529 1486 aa22.09■■□□□ 1.13
SMARCA2-215ENST00000452193 MROH2BQ7Z745 1585 aa22.05■■□□□ 1.12
SMARCA2-215ENST00000452193 DNAJC5Q9H3Z4 198 aa22.02■■□□□ 1.12
SMARCA2-215ENST00000452193 NESP48681 1621 aa21.94■■□□□ 1.1
SMARCA2-215ENST00000452193 PDS5BQ9NTI5 1447 aa21.91■■□□□ 1.1
SMARCA2-215ENST00000452193 SENP3Q9H4L4 574 aaPredicted RBP21.9■■□□□ 1.1
SMARCA2-215ENST00000452193 LAMC3Q9Y6N6 1575 aa21.9■■□□□ 1.1
SMARCA2-215ENST00000452193 CADPSQ9ULU8 1353 aa21.85■■□□□ 1.09
SMARCA2-215ENST00000452193 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
SMARCA2-215ENST00000452193 WIZO95785 1651 aa21.72■■□□□ 1.07
SMARCA2-215ENST00000452193 THOC2Q8NI27 1593 aaKnown RBP21.64■■□□□ 1.05
SMARCA2-215ENST00000452193 MRC2Q9UBG0 1479 aa21.6■■□□□ 1.05
SMARCA2-215ENST00000452193 TOP2AP11388 1531 aaKnown RBP21.56■■□□□ 1.04
SMARCA2-215ENST00000452193 CFTRP13569 1480 aa21.56■■□□□ 1.04
SMARCA2-215ENST00000452193 KIF21AQ7Z4S6 1674 aa21.55■■□□□ 1.04
SMARCA2-215ENST00000452193 CEP164Q9UPV0 1460 aa21.54■■□□□ 1.04
SMARCA2-215ENST00000452193 FANCD2Q9BXW9 1451 aa21.52■■□□□ 1.04
SMARCA2-215ENST00000452193 WDR62O43379 1518 aa21.49■■□□□ 1.03
SMARCA2-215ENST00000452193 CCDC88BA6NC98 1476 aa21.36■■□□□ 1.01
SMARCA2-215ENST00000452193 PLPPR3Q6T4P5 718 aa21.35■■□□□ 1.01
SMARCA2-215ENST00000452193 URB2Q14146 1524 aaKnown RBP21.26■□□□□ 0.99
SMARCA2-215ENST00000452193 OSCARQ8IYS5 282 aa21.24■□□□□ 0.99
SMARCA2-215ENST00000452193 ABCC8Q09428 1581 aa21.21■□□□□ 0.99
SMARCA2-215ENST00000452193 IFT140Q96RY7 1462 aa21.14■□□□□ 0.98
SMARCA2-215ENST00000452193 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
SMARCA2-215ENST00000452193 TOPBP1Q92547 1522 aa21.09■□□□□ 0.97
SMARCA2-215ENST00000452193 TRIM41Q8WV44 630 aa21.07■□□□□ 0.96
SMARCA2-215ENST00000452193 DNMBPQ6XZF7 1577 aa21.01■□□□□ 0.95
SMARCA2-215ENST00000452193 ZNF608Q9ULD9 1512 aaPredicted RBP20.98■□□□□ 0.95
SMARCA2-215ENST00000452193 SUPT5HO00267 1087 aaKnown RBP20.94■□□□□ 0.94
SMARCA2-215ENST00000452193 SOGA1O94964 1423 aa20.89■□□□□ 0.94
SMARCA2-215ENST00000452193 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.93
SMARCA2-215ENST00000452193 POLA1P09884 1462 aaPredicted RBP20.88■□□□□ 0.93
SMARCA2-215ENST00000452193 FBLN2P98095 1184 aa20.85■□□□□ 0.93
SMARCA2-215ENST00000452193 TARBP1Q13395 1621 aaKnown RBP20.82■□□□□ 0.92
SMARCA2-215ENST00000452193 EIF4G3O43432 1585 aaKnown RBP20.8■□□□□ 0.92
SMARCA2-215ENST00000452193 TDRD9Q8NDG6 1382 aaKnown RBP20.8■□□□□ 0.92
SMARCA2-215ENST00000452193 RAD54L2Q9Y4B4 1467 aa20.79■□□□□ 0.92
SMARCA2-215ENST00000452193 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
SMARCA2-215ENST00000452193 CHMP7Q8WUX9 453 aaPredicted RBP20.75■□□□□ 0.91
SMARCA2-215ENST00000452193 WDR97A6NE52 1622 aa20.73■□□□□ 0.91
SMARCA2-215ENST00000452193 CUX1P39880 1505 aa20.72■□□□□ 0.91
SMARCA2-215ENST00000452193 GRIN2BQ13224 1484 aa20.68■□□□□ 0.9
SMARCA2-215ENST00000452193 ARHGEF11O15085 1522 aa20.68■□□□□ 0.9
SMARCA2-215ENST00000452193 CYB5RLQ6IPT4 315 aa20.67■□□□□ 0.9
SMARCA2-215ENST00000452193 MAGI1Q96QZ7 1491 aaPredicted RBP20.66■□□□□ 0.9
SMARCA2-215ENST00000452193 RIMBP3CA6NJZ7 1639 aa20.65■□□□□ 0.9
SMARCA2-215ENST00000452193 RIMBP3BA6NNM3 1639 aa20.65■□□□□ 0.9
SMARCA2-215ENST00000452193 RIMBP3Q9UFD9 1639 aa20.65■□□□□ 0.9
SMARCA2-215ENST00000452193 SNAPC4Q5SXM2 1469 aa20.63■□□□□ 0.89
SMARCA2-215ENST00000452193 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
SMARCA2-215ENST00000452193 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
SMARCA2-215ENST00000452193 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.88
SMARCA2-215ENST00000452193 SYNJ2O15056 1496 aa20.57■□□□□ 0.88
SMARCA2-215ENST00000452193 CHD1O14646 1710 aa20.56■□□□□ 0.88
SMARCA2-215ENST00000452193 SYNJ1O43426 1573 aa20.53■□□□□ 0.88
SMARCA2-215ENST00000452193 ARAP1Q96P48 1450 aa20.45■□□□□ 0.86
SMARCA2-215ENST00000452193 TRHP20396 242 aaPredicted RBP20.45■□□□□ 0.86
SMARCA2-215ENST00000452193 CLASP1Q7Z460 1538 aa20.44■□□□□ 0.86
SMARCA2-215ENST00000452193 TOP2BQ02880 1626 aa20.43■□□□□ 0.86
SMARCA2-215ENST00000452193 ABCA5Q8WWZ7 1642 aa20.41■□□□□ 0.86
SMARCA2-215ENST00000452193 FHAD1B1AJZ9 1412 aa20.38■□□□□ 0.85
SMARCA2-215ENST00000452193 BIVM-ERCC5R4GMW8 1640 aa20.37■□□□□ 0.85
SMARCA2-215ENST00000452193 PBRM1Q86U86 1689 aa20.36■□□□□ 0.85
SMARCA2-215ENST00000452193 GRIN2AQ12879 1464 aa20.36■□□□□ 0.85
SMARCA2-215ENST00000452193 FOXD1Q16676 465 aa20.33■□□□□ 0.85
SMARCA2-215ENST00000452193 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
SMARCA2-215ENST00000452193 NUP160Q12769 1436 aa20.29■□□□□ 0.84
SMARCA2-215ENST00000452193 ADAMTS12P58397 1594 aa20.26■□□□□ 0.83
SMARCA2-215ENST00000452193 JPH4Q96JJ6 628 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms