RNA–Protein interactions for RNA: ENST00000451579.1

LINC02248-202, Transcript of long intergenic non-protein coding RNA 2248, humanhuman

TSL 3 BASIC

Gene LINC02248, Length 606 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02248-202ENST00000451579 AEBP2Q6ZN18 517 aaPredicted RBP25.49■■□□□ 1.67
LINC02248-202ENST00000451579 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
LINC02248-202ENST00000451579 NISCHQ9Y2I1 1504 aa24.43■■□□□ 1.5
LINC02248-202ENST00000451579 ABCC9O60706 1549 aa21.98■■□□□ 1.11
LINC02248-202ENST00000451579 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
LINC02248-202ENST00000451579 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
LINC02248-202ENST00000451579 SENP3Q9H4L4 574 aaPredicted RBP21.66■■□□□ 1.06
LINC02248-202ENST00000451579 RB1CC1Q8TDY2 1594 aa20.79■□□□□ 0.92
LINC02248-202ENST00000451579 DCAF8L2P0C7V8 631 aa20.76■□□□□ 0.91
LINC02248-202ENST00000451579 DNAJC5BQ9UF47 199 aa20.67■□□□□ 0.9
LINC02248-202ENST00000451579 NACADO15069 1562 aa20.64■□□□□ 0.9
LINC02248-202ENST00000451579 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
LINC02248-202ENST00000451579 UNC13AQ9UPW8 1703 aa20.33■□□□□ 0.85
LINC02248-202ENST00000451579 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
LINC02248-202ENST00000451579 BICRAQ9NZM4 1560 aa20.25■□□□□ 0.83
LINC02248-202ENST00000451579 ZCCHC6Q5VYS8 1495 aaKnown RBP20.24■□□□□ 0.83
LINC02248-202ENST00000451579 FOXD1Q16676 465 aa20.12■□□□□ 0.81
LINC02248-202ENST00000451579 DCAF1Q9Y4B6 1507 aa20.08■□□□□ 0.81
LINC02248-202ENST00000451579 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
LINC02248-202ENST00000451579 SCRIBQ14160 1630 aa20.02■□□□□ 0.79
LINC02248-202ENST00000451579 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.76
LINC02248-202ENST00000451579 CC2D2AQ9P2K1 1620 aa19.78■□□□□ 0.76
LINC02248-202ENST00000451579 CECR2Q9BXF3 1484 aa19.75■□□□□ 0.75
LINC02248-202ENST00000451579 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
LINC02248-202ENST00000451579 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
LINC02248-202ENST00000451579 ADRA2BP18089 450 aa19.23■□□□□ 0.67
LINC02248-202ENST00000451579 NCAPD3P42695 1498 aa19.1■□□□□ 0.65
LINC02248-202ENST00000451579 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
LINC02248-202ENST00000451579 SMARCA4P51532 1647 aa19.04■□□□□ 0.64
LINC02248-202ENST00000451579 PIAS4Q8N2W9 510 aaPredicted RBP18.97■□□□□ 0.63
LINC02248-202ENST00000451579 SMARCA2P51531 1590 aa18.96■□□□□ 0.63
LINC02248-202ENST00000451579 ERCC6Q03468 1493 aa18.92■□□□□ 0.62
LINC02248-202ENST00000451579 HMGXB3Q12766 1538 aa18.92■□□□□ 0.62
LINC02248-202ENST00000451579 BAZ1AQ9NRL2 1556 aaPredicted RBP18.92■□□□□ 0.62
LINC02248-202ENST00000451579 NESP48681 1621 aa18.9■□□□□ 0.62
LINC02248-202ENST00000451579 BAZ1BQ9UIG0 1483 aaKnown RBP18.89■□□□□ 0.61
LINC02248-202ENST00000451579 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.61
LINC02248-202ENST00000451579 DNAJC5Q9H3Z4 198 aa18.85■□□□□ 0.61
LINC02248-202ENST00000451579 CUX2O14529 1486 aa18.81■□□□□ 0.6
LINC02248-202ENST00000451579 PEG3Q9GZU2 1588 aa18.8■□□□□ 0.6
LINC02248-202ENST00000451579 WIZO95785 1651 aa18.63■□□□□ 0.57
LINC02248-202ENST00000451579 MSH5O43196 834 aa18.62■□□□□ 0.57
LINC02248-202ENST00000451579 LAMC3Q9Y6N6 1575 aa18.62■□□□□ 0.57
LINC02248-202ENST00000451579 THOC2Q8NI27 1593 aaKnown RBP18.61■□□□□ 0.57
LINC02248-202ENST00000451579 KIF21AQ7Z4S6 1674 aa18.57■□□□□ 0.56
LINC02248-202ENST00000451579 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
LINC02248-202ENST00000451579 PDS5BQ9NTI5 1447 aa18.55■□□□□ 0.56
LINC02248-202ENST00000451579 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
LINC02248-202ENST00000451579 MRC2Q9UBG0 1479 aa18.41■□□□□ 0.54
LINC02248-202ENST00000451579 TOP2AP11388 1531 aaKnown RBP18.35■□□□□ 0.53
LINC02248-202ENST00000451579 FANCD2Q9BXW9 1451 aa18.35■□□□□ 0.53
LINC02248-202ENST00000451579 WDR62O43379 1518 aa18.34■□□□□ 0.53
LINC02248-202ENST00000451579 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.53
LINC02248-202ENST00000451579 CFTRP13569 1480 aa18.33■□□□□ 0.52
LINC02248-202ENST00000451579 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
LINC02248-202ENST00000451579 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
LINC02248-202ENST00000451579 TRIM41Q8WV44 630 aa18.13■□□□□ 0.49
LINC02248-202ENST00000451579 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
LINC02248-202ENST00000451579 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
LINC02248-202ENST00000451579 OSCARQ8IYS5 282 aa18.02■□□□□ 0.48
LINC02248-202ENST00000451579 TOPBP1Q92547 1522 aa18■□□□□ 0.47
LINC02248-202ENST00000451579 IFT140Q96RY7 1462 aa17.96■□□□□ 0.47
LINC02248-202ENST00000451579 DNMBPQ6XZF7 1577 aa17.9■□□□□ 0.46
LINC02248-202ENST00000451579 AQRO60306 1485 aaKnown RBP eCLIP17.87■□□□□ 0.45
LINC02248-202ENST00000451579 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
LINC02248-202ENST00000451579 EIF4G3O43432 1585 aaKnown RBP17.85■□□□□ 0.45
LINC02248-202ENST00000451579 POLA1P09884 1462 aaPredicted RBP17.83■□□□□ 0.45
LINC02248-202ENST00000451579 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
LINC02248-202ENST00000451579 TARBP1Q13395 1621 aaKnown RBP17.82■□□□□ 0.44
LINC02248-202ENST00000451579 SUPT5HO00267 1087 aaKnown RBP17.79■□□□□ 0.44
LINC02248-202ENST00000451579 TDRD9Q8NDG6 1382 aaKnown RBP17.78■□□□□ 0.44
LINC02248-202ENST00000451579 RIMBP3CA6NJZ7 1639 aa17.77■□□□□ 0.44
LINC02248-202ENST00000451579 RIMBP3BA6NNM3 1639 aa17.77■□□□□ 0.44
LINC02248-202ENST00000451579 RIMBP3Q9UFD9 1639 aa17.77■□□□□ 0.44
LINC02248-202ENST00000451579 FBLN2P98095 1184 aa17.77■□□□□ 0.44
LINC02248-202ENST00000451579 SOGA1O94964 1423 aa17.75■□□□□ 0.43
LINC02248-202ENST00000451579 ARHGEF11O15085 1522 aa17.73■□□□□ 0.43
LINC02248-202ENST00000451579 FGD5Q6ZNL6 1462 aa17.73■□□□□ 0.43
LINC02248-202ENST00000451579 CUX1P39880 1505 aa17.72■□□□□ 0.43
LINC02248-202ENST00000451579 CHD1O14646 1710 aa17.7■□□□□ 0.42
LINC02248-202ENST00000451579 CYB5RLQ6IPT4 315 aa17.67■□□□□ 0.42
LINC02248-202ENST00000451579 SNAPC4Q5SXM2 1469 aa17.65■□□□□ 0.42
LINC02248-202ENST00000451579 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
LINC02248-202ENST00000451579 SCAF1Q9H7N4 1312 aaKnown RBP17.59■□□□□ 0.41
LINC02248-202ENST00000451579 ARAP1Q96P48 1450 aa17.58■□□□□ 0.41
LINC02248-202ENST00000451579 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.4
LINC02248-202ENST00000451579 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
LINC02248-202ENST00000451579 MAGI1Q96QZ7 1491 aaPredicted RBP17.53■□□□□ 0.4
LINC02248-202ENST00000451579 WDR97A6NE52 1622 aa17.53■□□□□ 0.4
LINC02248-202ENST00000451579 GAPVD1Q14C86 1478 aa17.52■□□□□ 0.4
LINC02248-202ENST00000451579 CLASP1Q7Z460 1538 aa17.51■□□□□ 0.39
LINC02248-202ENST00000451579 MAPK8IP2Q13387 824 aaPredicted RBP17.5■□□□□ 0.39
LINC02248-202ENST00000451579 SYNJ2O15056 1496 aa17.5■□□□□ 0.39
LINC02248-202ENST00000451579 ABCA10Q8WWZ4 1543 aa17.49■□□□□ 0.39
LINC02248-202ENST00000451579 PBRM1Q86U86 1689 aa17.46■□□□□ 0.39
LINC02248-202ENST00000451579 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
LINC02248-202ENST00000451579 TRHP20396 242 aaPredicted RBP17.45■□□□□ 0.38
LINC02248-202ENST00000451579 ABCA5Q8WWZ7 1642 aa17.45■□□□□ 0.38
LINC02248-202ENST00000451579 WRNQ14191 1432 aaPredicted RBP eCLIP17.42■□□□□ 0.38
LINC02248-202ENST00000451579 TOP2BQ02880 1626 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms