RNA–Protein interactions for RNA: ENST00000451406.5

SLC38A6-203, Transcript of solute carrier family 38 member 6, humanhuman

TSL 1 (best)

Gene SLC38A6, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-203ENST00000451406 NISCHQ9Y2I1 1504 aa21.85■■□□□ 1.09
SLC38A6-203ENST00000451406 AEBP2Q6ZN18 517 aaPredicted RBP21.58■■□□□ 1.05
SLC38A6-203ENST00000451406 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
SLC38A6-203ENST00000451406 ABCC9O60706 1549 aa19.79■□□□□ 0.76
SLC38A6-203ENST00000451406 CCDC180Q9P1Z9 1646 aa19.63■□□□□ 0.73
SLC38A6-203ENST00000451406 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
SLC38A6-203ENST00000451406 DNAJC5BQ9UF47 199 aa18.68■□□□□ 0.58
SLC38A6-203ENST00000451406 NACADO15069 1562 aa18.55■□□□□ 0.56
SLC38A6-203ENST00000451406 DCAF8L2P0C7V8 631 aa18.55■□□□□ 0.56
SLC38A6-203ENST00000451406 SENP3Q9H4L4 574 aaPredicted RBP18.48■□□□□ 0.55
SLC38A6-203ENST00000451406 UNC13AQ9UPW8 1703 aa18.44■□□□□ 0.54
SLC38A6-203ENST00000451406 PABPN1Q86U42 306 aaKnown RBP eCLIP18.43■□□□□ 0.54
SLC38A6-203ENST00000451406 PHF23Q9BUL5 403 aaPredicted RBP18.32■□□□□ 0.52
SLC38A6-203ENST00000451406 BICRAQ9NZM4 1560 aa18.26■□□□□ 0.51
SLC38A6-203ENST00000451406 MYO15BQ96JP2 1530 aa18.21■□□□□ 0.51
SLC38A6-203ENST00000451406 ZCCHC6Q5VYS8 1495 aaKnown RBP18.09■□□□□ 0.49
SLC38A6-203ENST00000451406 DCAF1Q9Y4B6 1507 aa17.98■□□□□ 0.47
SLC38A6-203ENST00000451406 SCRIBQ14160 1630 aa17.96■□□□□ 0.47
SLC38A6-203ENST00000451406 CC2D2AQ9P2K1 1620 aa17.86■□□□□ 0.45
SLC38A6-203ENST00000451406 SHROOM4Q9ULL8 1493 aa17.83■□□□□ 0.44
SLC38A6-203ENST00000451406 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
SLC38A6-203ENST00000451406 EIF4G1Q04637 1599 aaKnown RBP17.78■□□□□ 0.44
SLC38A6-203ENST00000451406 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
SLC38A6-203ENST00000451406 DNAJC5Q9H3Z4 198 aa17.13■□□□□ 0.33
SLC38A6-203ENST00000451406 ATAD2BQ9ULI0 1458 aa17.1■□□□□ 0.33
SLC38A6-203ENST00000451406 SMARCA4P51532 1647 aa17.09■□□□□ 0.33
SLC38A6-203ENST00000451406 FOXD1Q16676 465 aa17.08■□□□□ 0.32
SLC38A6-203ENST00000451406 ERCC6Q03468 1493 aa17.04■□□□□ 0.32
SLC38A6-203ENST00000451406 SMARCA2P51531 1590 aa17.02■□□□□ 0.32
SLC38A6-203ENST00000451406 NESP48681 1621 aa17.01■□□□□ 0.31
SLC38A6-203ENST00000451406 HMGXB3Q12766 1538 aa17■□□□□ 0.31
SLC38A6-203ENST00000451406 CUX2O14529 1486 aa17■□□□□ 0.31
SLC38A6-203ENST00000451406 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
SLC38A6-203ENST00000451406 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
SLC38A6-203ENST00000451406 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
SLC38A6-203ENST00000451406 MROH2BQ7Z745 1585 aa16.89■□□□□ 0.29
SLC38A6-203ENST00000451406 PEG3Q9GZU2 1588 aa16.87■□□□□ 0.29
SLC38A6-203ENST00000451406 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
SLC38A6-203ENST00000451406 KIF21AQ7Z4S6 1674 aa16.79■□□□□ 0.28
SLC38A6-203ENST00000451406 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.28
SLC38A6-203ENST00000451406 WIZO95785 1651 aa16.72■□□□□ 0.27
SLC38A6-203ENST00000451406 PDS5BQ9NTI5 1447 aa16.65■□□□□ 0.26
SLC38A6-203ENST00000451406 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
SLC38A6-203ENST00000451406 MRC2Q9UBG0 1479 aa16.55■□□□□ 0.24
SLC38A6-203ENST00000451406 WDR62O43379 1518 aa16.52■□□□□ 0.24
SLC38A6-203ENST00000451406 CEP164Q9UPV0 1460 aa16.47■□□□□ 0.23
SLC38A6-203ENST00000451406 RSF1Q96T23 1441 aaPredicted RBP16.47■□□□□ 0.23
SLC38A6-203ENST00000451406 FANCD2Q9BXW9 1451 aa16.46■□□□□ 0.23
SLC38A6-203ENST00000451406 CFTRP13569 1480 aa16.42■□□□□ 0.22
SLC38A6-203ENST00000451406 TOP2AP11388 1531 aaKnown RBP16.41■□□□□ 0.22
SLC38A6-203ENST00000451406 TRIM41Q8WV44 630 aa16.41■□□□□ 0.22
SLC38A6-203ENST00000451406 URB2Q14146 1524 aaKnown RBP16.36■□□□□ 0.21
SLC38A6-203ENST00000451406 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
SLC38A6-203ENST00000451406 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
SLC38A6-203ENST00000451406 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
SLC38A6-203ENST00000451406 PPP6R1Q9UPN7 881 aa16.21■□□□□ 0.18
SLC38A6-203ENST00000451406 ADRA2BP18089 450 aa16.2■□□□□ 0.18
SLC38A6-203ENST00000451406 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
SLC38A6-203ENST00000451406 TOPBP1Q92547 1522 aa16.15■□□□□ 0.18
SLC38A6-203ENST00000451406 IFT140Q96RY7 1462 aa16.12■□□□□ 0.17
SLC38A6-203ENST00000451406 RIMBP3CA6NJZ7 1639 aa16.1■□□□□ 0.17
SLC38A6-203ENST00000451406 RIMBP3BA6NNM3 1639 aa16.1■□□□□ 0.17
SLC38A6-203ENST00000451406 PIAS4Q8N2W9 510 aaPredicted RBP16.1■□□□□ 0.17
SLC38A6-203ENST00000451406 RIMBP3Q9UFD9 1639 aa16.1■□□□□ 0.17
SLC38A6-203ENST00000451406 EIF4G3O43432 1585 aaKnown RBP16.08■□□□□ 0.16
SLC38A6-203ENST00000451406 DNMBPQ6XZF7 1577 aa16.06■□□□□ 0.16
SLC38A6-203ENST00000451406 TARBP1Q13395 1621 aaKnown RBP16.03■□□□□ 0.16
SLC38A6-203ENST00000451406 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.16
SLC38A6-203ENST00000451406 CHD1O14646 1710 aa16.02■□□□□ 0.16
SLC38A6-203ENST00000451406 ABCC8Q09428 1581 aa16.02■□□□□ 0.15
SLC38A6-203ENST00000451406 ARHGEF11O15085 1522 aa16.01■□□□□ 0.15
SLC38A6-203ENST00000451406 POLA1P09884 1462 aaPredicted RBP15.98■□□□□ 0.15
SLC38A6-203ENST00000451406 RAD54L2Q9Y4B4 1467 aa15.96■□□□□ 0.15
SLC38A6-203ENST00000451406 MSH5O43196 834 aa15.96■□□□□ 0.14
SLC38A6-203ENST00000451406 FBLN2P98095 1184 aa15.93■□□□□ 0.14
SLC38A6-203ENST00000451406 CYB5RLQ6IPT4 315 aa15.91■□□□□ 0.14
SLC38A6-203ENST00000451406 TDRD9Q8NDG6 1382 aaKnown RBP15.91■□□□□ 0.14
SLC38A6-203ENST00000451406 SOGA1O94964 1423 aa15.89■□□□□ 0.13
SLC38A6-203ENST00000451406 FGD5Q6ZNL6 1462 aa15.87■□□□□ 0.13
SLC38A6-203ENST00000451406 CUX1P39880 1505 aa15.86■□□□□ 0.13
SLC38A6-203ENST00000451406 ARAP1Q96P48 1450 aa15.86■□□□□ 0.13
SLC38A6-203ENST00000451406 SNAPC4Q5SXM2 1469 aa15.84■□□□□ 0.13
SLC38A6-203ENST00000451406 WDR97A6NE52 1622 aa15.78■□□□□ 0.12
SLC38A6-203ENST00000451406 CLASP1Q7Z460 1538 aa15.77■□□□□ 0.12
SLC38A6-203ENST00000451406 PBRM1Q86U86 1689 aa15.76■□□□□ 0.11
SLC38A6-203ENST00000451406 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
SLC38A6-203ENST00000451406 CHMP7Q8WUX9 453 aaPredicted RBP15.75■□□□□ 0.11
SLC38A6-203ENST00000451406 GRIN2BQ13224 1484 aa15.74■□□□□ 0.11
SLC38A6-203ENST00000451406 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
SLC38A6-203ENST00000451406 MAGI1Q96QZ7 1491 aaPredicted RBP15.73■□□□□ 0.11
SLC38A6-203ENST00000451406 SYNJ1O43426 1573 aa15.72■□□□□ 0.11
SLC38A6-203ENST00000451406 SYNJ2O15056 1496 aa15.7■□□□□ 0.1
SLC38A6-203ENST00000451406 GAPVD1Q14C86 1478 aa15.69■□□□□ 0.1
SLC38A6-203ENST00000451406 ABCA5Q8WWZ7 1642 aa15.67■□□□□ 0.1
SLC38A6-203ENST00000451406 ABCA10Q8WWZ4 1543 aa15.65■□□□□ 0.1
SLC38A6-203ENST00000451406 ERCC6L2Q5T890 1561 aa15.6■□□□□ 0.09
SLC38A6-203ENST00000451406 BIVM-ERCC5R4GMW8 1640 aa15.57■□□□□ 0.08
SLC38A6-203ENST00000451406 ADAMTS12P58397 1594 aa15.56■□□□□ 0.08
SLC38A6-203ENST00000451406 GRIN2AQ12879 1464 aa15.56■□□□□ 0.08
SLC38A6-203ENST00000451406 TOP2BQ02880 1626 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms