RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 NISCHQ9Y2I1 1504 aa40.82■■■■■ 4.12
RPUSD3-209ENST00000451405 ABCC9O60706 1549 aa36.94■■■■□ 3.5
RPUSD3-209ENST00000451405 CCDC180Q9P1Z9 1646 aa36.44■■■■□ 3.42
RPUSD3-209ENST00000451405 DNAJC5BQ9UF47 199 aa35.22■■■■□ 3.23
RPUSD3-209ENST00000451405 RB1CC1Q8TDY2 1594 aa34.82■■■■□ 3.16
RPUSD3-209ENST00000451405 DCAF8L2P0C7V8 631 aa34.48■■■■□ 3.11
RPUSD3-209ENST00000451405 NACADO15069 1562 aa34.42■■■■□ 3.1
RPUSD3-209ENST00000451405 PABPN1Q86U42 306 aaKnown RBP eCLIP34.41■■■■□ 3.1
RPUSD3-209ENST00000451405 MYO15BQ96JP2 1530 aa34.01■■■■□ 3.04
RPUSD3-209ENST00000451405 UNC13AQ9UPW8 1703 aa33.87■■■■□ 3.01
RPUSD3-209ENST00000451405 ZCCHC6Q5VYS8 1495 aaKnown RBP33.85■■■■□ 3.01
RPUSD3-209ENST00000451405 BICRAQ9NZM4 1560 aa33.72■■■□□ 2.99
RPUSD3-209ENST00000451405 DCAF1Q9Y4B6 1507 aa33.68■■■□□ 2.98
RPUSD3-209ENST00000451405 CECR2Q9BXF3 1484 aa33.34■■■□□ 2.93
RPUSD3-209ENST00000451405 SCRIBQ14160 1630 aa33.29■■■□□ 2.92
RPUSD3-209ENST00000451405 SHROOM4Q9ULL8 1493 aa33.25■■■□□ 2.91
RPUSD3-209ENST00000451405 CC2D2AQ9P2K1 1620 aa33.24■■■□□ 2.91
RPUSD3-209ENST00000451405 EIF4G1Q04637 1599 aaKnown RBP33.01■■■□□ 2.88
RPUSD3-209ENST00000451405 DNAJC5Q9H3Z4 198 aa32.83■■■□□ 2.85
RPUSD3-209ENST00000451405 CUX2O14529 1486 aa32.03■■■□□ 2.72
RPUSD3-209ENST00000451405 ERCC6Q03468 1493 aa31.99■■■□□ 2.71
RPUSD3-209ENST00000451405 NCAPD3P42695 1498 aa31.83■■■□□ 2.69
RPUSD3-209ENST00000451405 SMARCA4P51532 1647 aa31.77■■■□□ 2.68
RPUSD3-209ENST00000451405 ATAD2BQ9ULI0 1458 aa31.77■■■□□ 2.68
RPUSD3-209ENST00000451405 SMARCA2P51531 1590 aa31.63■■■□□ 2.65
RPUSD3-209ENST00000451405 BAZ1AQ9NRL2 1556 aaPredicted RBP31.62■■■□□ 2.65
RPUSD3-209ENST00000451405 HMGXB3Q12766 1538 aa31.55■■■□□ 2.64
RPUSD3-209ENST00000451405 NESP48681 1621 aa31.51■■■□□ 2.63
RPUSD3-209ENST00000451405 MROH2BQ7Z745 1585 aa31.49■■■□□ 2.63
RPUSD3-209ENST00000451405 PEG3Q9GZU2 1588 aa31.44■■■□□ 2.62
RPUSD3-209ENST00000451405 BAZ1BQ9UIG0 1483 aaKnown RBP31.44■■■□□ 2.62
RPUSD3-209ENST00000451405 TRIM41Q8WV44 630 aa31.26■■■□□ 2.59
RPUSD3-209ENST00000451405 THOC2Q8NI27 1593 aaKnown RBP31.18■■■□□ 2.58
RPUSD3-209ENST00000451405 LAMC3Q9Y6N6 1575 aa31.15■■■□□ 2.58
RPUSD3-209ENST00000451405 PDS5BQ9NTI5 1447 aa31.13■■■□□ 2.57
RPUSD3-209ENST00000451405 WIZO95785 1651 aa31.12■■■□□ 2.57
RPUSD3-209ENST00000451405 KIF21AQ7Z4S6 1674 aa30.96■■■□□ 2.55
RPUSD3-209ENST00000451405 RSF1Q96T23 1441 aaPredicted RBP30.93■■■□□ 2.54
RPUSD3-209ENST00000451405 CADPSQ9ULU8 1353 aa30.89■■■□□ 2.54
RPUSD3-209ENST00000451405 MRC2Q9UBG0 1479 aa30.82■■■□□ 2.52
RPUSD3-209ENST00000451405 WDR62O43379 1518 aa30.68■■■□□ 2.5
RPUSD3-209ENST00000451405 TOP2AP11388 1531 aaKnown RBP30.68■■■□□ 2.5
RPUSD3-209ENST00000451405 OSCARQ8IYS5 282 aa30.66■■■□□ 2.5
RPUSD3-209ENST00000451405 CEP164Q9UPV0 1460 aa30.58■■■□□ 2.49
RPUSD3-209ENST00000451405 CFTRP13569 1480 aa30.57■■■□□ 2.48
RPUSD3-209ENST00000451405 FANCD2Q9BXW9 1451 aa30.51■■■□□ 2.48
RPUSD3-209ENST00000451405 CCDC88BA6NC98 1476 aa30.41■■■□□ 2.46
RPUSD3-209ENST00000451405 URB2Q14146 1524 aaKnown RBP30.27■■■□□ 2.44
RPUSD3-209ENST00000451405 PRDM2Q13029 1718 aa30.2■■■□□ 2.43
RPUSD3-209ENST00000451405 RIMBP3CA6NJZ7 1639 aa30.09■■■□□ 2.41
RPUSD3-209ENST00000451405 RIMBP3BA6NNM3 1639 aa30.09■■■□□ 2.41
RPUSD3-209ENST00000451405 RIMBP3Q9UFD9 1639 aa30.09■■■□□ 2.41
RPUSD3-209ENST00000451405 IFT140Q96RY7 1462 aa30■■■□□ 2.39
RPUSD3-209ENST00000451405 CYB5RLQ6IPT4 315 aa30■■■□□ 2.39
RPUSD3-209ENST00000451405 ZNF608Q9ULD9 1512 aaPredicted RBP29.99■■■□□ 2.39
RPUSD3-209ENST00000451405 ARHGEF11O15085 1522 aa29.97■■■□□ 2.39
RPUSD3-209ENST00000451405 TOPBP1Q92547 1522 aa29.96■■■□□ 2.39
RPUSD3-209ENST00000451405 TRHP20396 242 aaPredicted RBP29.94■■■□□ 2.38
RPUSD3-209ENST00000451405 ABCC8Q09428 1581 aa29.87■■■□□ 2.37
RPUSD3-209ENST00000451405 DNMBPQ6XZF7 1577 aa29.85■■■□□ 2.37
RPUSD3-209ENST00000451405 FBLN2P98095 1184 aa29.82■■■□□ 2.36
RPUSD3-209ENST00000451405 SUPT5HO00267 1087 aaKnown RBP29.8■■■□□ 2.36
RPUSD3-209ENST00000451405 AQRO60306 1485 aaKnown RBP eCLIP29.71■■■□□ 2.353e-6■■□□□ 13.8
RPUSD3-209ENST00000451405 EIF4G3O43432 1585 aaKnown RBP29.71■■■□□ 2.35
RPUSD3-209ENST00000451405 TARBP1Q13395 1621 aaKnown RBP29.69■■■□□ 2.34
RPUSD3-209ENST00000451405 POLA1P09884 1462 aaPredicted RBP29.68■■■□□ 2.34
RPUSD3-209ENST00000451405 ARAP1Q96P48 1450 aa29.63■■■□□ 2.33
RPUSD3-209ENST00000451405 RAD54L2Q9Y4B4 1467 aa29.61■■■□□ 2.33
RPUSD3-209ENST00000451405 SOGA1O94964 1423 aa29.58■■■□□ 2.33
RPUSD3-209ENST00000451405 CHD1O14646 1710 aa29.57■■■□□ 2.32
RPUSD3-209ENST00000451405 CUX1P39880 1505 aa29.55■■■□□ 2.32
RPUSD3-209ENST00000451405 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
RPUSD3-209ENST00000451405 FGD5Q6ZNL6 1462 aa29.53■■■□□ 2.32
RPUSD3-209ENST00000451405 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
RPUSD3-209ENST00000451405 CHMP7Q8WUX9 453 aaPredicted RBP29.46■■■□□ 2.31
RPUSD3-209ENST00000451405 SNAPC4Q5SXM2 1469 aa29.34■■■□□ 2.29
RPUSD3-209ENST00000451405 WDR97A6NE52 1622 aa29.3■■■□□ 2.28
RPUSD3-209ENST00000451405 SYNJ1O43426 1573 aa29.26■■■□□ 2.27
RPUSD3-209ENST00000451405 CLASP1Q7Z460 1538 aa29.25■■■□□ 2.27
RPUSD3-209ENST00000451405 GRIN2BQ13224 1484 aa29.24■■■□□ 2.27
RPUSD3-209ENST00000451405 MAGI1Q96QZ7 1491 aaPredicted RBP29.22■■■□□ 2.27
RPUSD3-209ENST00000451405 GAPVD1Q14C86 1478 aa29.19■■■□□ 2.26
RPUSD3-209ENST00000451405 ABCA10Q8WWZ4 1543 aa29.19■■■□□ 2.26
RPUSD3-209ENST00000451405 SYNJ2O15056 1496 aa29.15■■■□□ 2.26
RPUSD3-209ENST00000451405 WRNQ14191 1432 aaPredicted RBP eCLIP29.13■■■□□ 2.25
RPUSD3-209ENST00000451405 PBRM1Q86U86 1689 aa29.12■■■□□ 2.25
RPUSD3-209ENST00000451405 TOP2BQ02880 1626 aa29.11■■■□□ 2.25
RPUSD3-209ENST00000451405 ABCA5Q8WWZ7 1642 aa29.11■■■□□ 2.25
RPUSD3-209ENST00000451405 BIVM-ERCC5R4GMW8 1640 aa29.1■■■□□ 2.25
RPUSD3-209ENST00000451405 GRIN2AQ12879 1464 aa28.87■■■□□ 2.21
RPUSD3-209ENST00000451405 ADAMTS12P58397 1594 aa28.86■■■□□ 2.21
RPUSD3-209ENST00000451405 FHAD1B1AJZ9 1412 aa28.82■■■□□ 2.2
RPUSD3-209ENST00000451405 ERICH3Q5RHP9 1530 aa28.8■■■□□ 2.2
RPUSD3-209ENST00000451405 CEP170Q5SW79 1584 aa28.78■■■□□ 2.2
RPUSD3-209ENST00000451405 ERCC6L2Q5T890 1561 aa28.78■■■□□ 2.2
RPUSD3-209ENST00000451405 NUP160Q12769 1436 aa28.77■■■□□ 2.2
RPUSD3-209ENST00000451405 NPM1P06748 294 aaKnown RBP eCLIP28.6■■■□□ 2.17
RPUSD3-209ENST00000451405 SHROOM2Q13796 1616 aa28.6■■■□□ 2.17
RPUSD3-209ENST00000451405 IGF1RP08069 1367 aa28.59■■■□□ 2.17
RPUSD3-209ENST00000451405 FAM69CQ0P6D2 419 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms