RNA–Protein interactions for RNA: ENST00000450514.5

HCG25-220, Transcript of HLA complex group 25, humanhuman

TSL 3 BASIC

Gene HCG25, Length 759 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG25-220ENST00000450514 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
HCG25-220ENST00000450514 ABCC9O60706 1549 aa21.7■■□□□ 1.07
HCG25-220ENST00000450514 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
HCG25-220ENST00000450514 RB1CC1Q8TDY2 1594 aa20.55■□□□□ 0.88
HCG25-220ENST00000450514 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
HCG25-220ENST00000450514 NACADO15069 1562 aa20.33■□□□□ 0.84
HCG25-220ENST00000450514 DCAF8L2P0C7V8 631 aa20.22■□□□□ 0.83
HCG25-220ENST00000450514 PABPN1Q86U42 306 aaKnown RBP eCLIP20.16■□□□□ 0.82
HCG25-220ENST00000450514 UNC13AQ9UPW8 1703 aa20.09■□□□□ 0.81
HCG25-220ENST00000450514 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
HCG25-220ENST00000450514 BICRAQ9NZM4 1560 aa19.9■□□□□ 0.78
HCG25-220ENST00000450514 SHROOM4Q9ULL8 1493 aa19.64■□□□□ 0.73
HCG25-220ENST00000450514 CC2D2AQ9P2K1 1620 aa19.59■□□□□ 0.73
HCG25-220ENST00000450514 CECR2Q9BXF3 1484 aa19.59■□□□□ 0.73
HCG25-220ENST00000450514 ZCCHC6Q5VYS8 1495 aaKnown RBP19.56■□□□□ 0.72
HCG25-220ENST00000450514 DCAF1Q9Y4B6 1507 aa19.55■□□□□ 0.72
HCG25-220ENST00000450514 SCRIBQ14160 1630 aa19.52■□□□□ 0.72
HCG25-220ENST00000450514 EIF4G1Q04637 1599 aaKnown RBP19.46■□□□□ 0.71
HCG25-220ENST00000450514 DNAJC5Q9H3Z4 198 aa19.13■□□□□ 0.65
HCG25-220ENST00000450514 CUX2O14529 1486 aa18.84■□□□□ 0.61
HCG25-220ENST00000450514 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
HCG25-220ENST00000450514 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
HCG25-220ENST00000450514 ATAD2BQ9ULI0 1458 aa18.64■□□□□ 0.57
HCG25-220ENST00000450514 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
HCG25-220ENST00000450514 HMGXB3Q12766 1538 aa18.59■□□□□ 0.57
HCG25-220ENST00000450514 SMARCA4P51532 1647 aa18.57■□□□□ 0.56
HCG25-220ENST00000450514 NESP48681 1621 aa18.53■□□□□ 0.56
HCG25-220ENST00000450514 BAZ1BQ9UIG0 1483 aaKnown RBP18.48■□□□□ 0.55
HCG25-220ENST00000450514 BAZ1AQ9NRL2 1556 aaPredicted RBP18.44■□□□□ 0.54
HCG25-220ENST00000450514 THOC2Q8NI27 1593 aaKnown RBP18.42■□□□□ 0.54
HCG25-220ENST00000450514 LAMC3Q9Y6N6 1575 aa18.4■□□□□ 0.54
HCG25-220ENST00000450514 PEG3Q9GZU2 1588 aa18.35■□□□□ 0.53
HCG25-220ENST00000450514 KIF21AQ7Z4S6 1674 aa18.34■□□□□ 0.53
HCG25-220ENST00000450514 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
HCG25-220ENST00000450514 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
HCG25-220ENST00000450514 TRIM41Q8WV44 630 aa18.24■□□□□ 0.51
HCG25-220ENST00000450514 MRC2Q9UBG0 1479 aa18.16■□□□□ 0.5
HCG25-220ENST00000450514 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
HCG25-220ENST00000450514 WDR62O43379 1518 aa18.1■□□□□ 0.49
HCG25-220ENST00000450514 CEP164Q9UPV0 1460 aa18.05■□□□□ 0.48
HCG25-220ENST00000450514 WIZO95785 1651 aa18.05■□□□□ 0.48
HCG25-220ENST00000450514 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
HCG25-220ENST00000450514 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
HCG25-220ENST00000450514 CFTRP13569 1480 aa17.88■□□□□ 0.45
HCG25-220ENST00000450514 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
HCG25-220ENST00000450514 TOP2AP11388 1531 aaKnown RBP17.79■□□□□ 0.44
HCG25-220ENST00000450514 PRDM2Q13029 1718 aa17.77■□□□□ 0.44
HCG25-220ENST00000450514 RSF1Q96T23 1441 aaPredicted RBP17.75■□□□□ 0.43
HCG25-220ENST00000450514 RIMBP3CA6NJZ7 1639 aa17.73■□□□□ 0.43
HCG25-220ENST00000450514 RIMBP3BA6NNM3 1639 aa17.73■□□□□ 0.43
HCG25-220ENST00000450514 RIMBP3Q9UFD9 1639 aa17.73■□□□□ 0.43
HCG25-220ENST00000450514 IFT140Q96RY7 1462 aa17.68■□□□□ 0.42
HCG25-220ENST00000450514 ZNF608Q9ULD9 1512 aaPredicted RBP17.64■□□□□ 0.41
HCG25-220ENST00000450514 ARHGEF11O15085 1522 aa17.63■□□□□ 0.41
HCG25-220ENST00000450514 TOPBP1Q92547 1522 aa17.59■□□□□ 0.41
HCG25-220ENST00000450514 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
HCG25-220ENST00000450514 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
HCG25-220ENST00000450514 EIF4G3O43432 1585 aaKnown RBP17.57■□□□□ 0.4
HCG25-220ENST00000450514 CYB5RLQ6IPT4 315 aa17.55■□□□□ 0.4
HCG25-220ENST00000450514 CHD1O14646 1710 aa17.52■□□□□ 0.4
HCG25-220ENST00000450514 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.39
HCG25-220ENST00000450514 TRHP20396 242 aaPredicted RBP17.5■□□□□ 0.39
HCG25-220ENST00000450514 FBLN2P98095 1184 aa17.48■□□□□ 0.39
HCG25-220ENST00000450514 AQRO60306 1485 aaKnown RBP eCLIP17.46■□□□□ 0.39
HCG25-220ENST00000450514 TARBP1Q13395 1621 aaKnown RBP17.45■□□□□ 0.38
HCG25-220ENST00000450514 ARAP1Q96P48 1450 aa17.42■□□□□ 0.38
HCG25-220ENST00000450514 POLA1P09884 1462 aaPredicted RBP17.38■□□□□ 0.37
HCG25-220ENST00000450514 SOGA1O94964 1423 aa17.33■□□□□ 0.36
HCG25-220ENST00000450514 RAD54L2Q9Y4B4 1467 aa17.32■□□□□ 0.36
HCG25-220ENST00000450514 TDRD9Q8NDG6 1382 aaKnown RBP17.31■□□□□ 0.36
HCG25-220ENST00000450514 SNAPC4Q5SXM2 1469 aa17.3■□□□□ 0.36
HCG25-220ENST00000450514 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
HCG25-220ENST00000450514 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
HCG25-220ENST00000450514 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
HCG25-220ENST00000450514 CLASP1Q7Z460 1538 aa17.26■□□□□ 0.35
HCG25-220ENST00000450514 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
HCG25-220ENST00000450514 MAGI1Q96QZ7 1491 aaPredicted RBP17.24■□□□□ 0.35
HCG25-220ENST00000450514 AEBP2Q6ZN18 517 aaPredicted RBP17.24■□□□□ 0.35
HCG25-220ENST00000450514 GRIN2BQ13224 1484 aa17.21■□□□□ 0.35
HCG25-220ENST00000450514 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
HCG25-220ENST00000450514 CUX1P39880 1505 aa17.17■□□□□ 0.34
HCG25-220ENST00000450514 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
HCG25-220ENST00000450514 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
HCG25-220ENST00000450514 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
HCG25-220ENST00000450514 ABCA10Q8WWZ4 1543 aa17.02■□□□□ 0.32
HCG25-220ENST00000450514 GRIN2AQ12879 1464 aa16.98■□□□□ 0.31
HCG25-220ENST00000450514 ERCC6L2Q5T890 1561 aa16.96■□□□□ 0.31
HCG25-220ENST00000450514 CEP170Q5SW79 1584 aa16.94■□□□□ 0.3
HCG25-220ENST00000450514 ADAMTS12P58397 1594 aa16.94■□□□□ 0.3
HCG25-220ENST00000450514 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
HCG25-220ENST00000450514 NUP160Q12769 1436 aa16.91■□□□□ 0.3
HCG25-220ENST00000450514 SHROOM2Q13796 1616 aa16.88■□□□□ 0.29
HCG25-220ENST00000450514 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
HCG25-220ENST00000450514 KIF13AQ9H1H9 1805 aa16.85■□□□□ 0.29
HCG25-220ENST00000450514 BIVM-ERCC5R4GMW8 1640 aa16.85■□□□□ 0.29
HCG25-220ENST00000450514 SUPT5HO00267 1087 aaKnown RBP16.83■□□□□ 0.28
HCG25-220ENST00000450514 TOP2BQ02880 1626 aa16.83■□□□□ 0.28
HCG25-220ENST00000450514 ERICH3Q5RHP9 1530 aa16.82■□□□□ 0.28
HCG25-220ENST00000450514 PRG4Q92954 1404 aaPredicted RBP16.8■□□□□ 0.28
HCG25-220ENST00000450514 NPM1P06748 294 aaKnown RBP eCLIP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms