RNA–Protein interactions for RNA: ENST00000450324.1

LINC02248-201, Transcript of long intergenic non-protein coding RNA 2248, humanhuman

TSL 3 BASIC

Gene LINC02248, Length 516 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02248-201ENST00000450324 NISCHQ9Y2I1 1504 aa26.53■■□□□ 1.84
LINC02248-201ENST00000450324 AEBP2Q6ZN18 517 aaPredicted RBP23.77■■□□□ 1.4
LINC02248-201ENST00000450324 CCDC180Q9P1Z9 1646 aa23.7■■□□□ 1.38
LINC02248-201ENST00000450324 ABCC9O60706 1549 aa23.23■■□□□ 1.31
LINC02248-201ENST00000450324 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
LINC02248-201ENST00000450324 RB1CC1Q8TDY2 1594 aa22.35■■□□□ 1.17
LINC02248-201ENST00000450324 NACADO15069 1562 aa22.33■■□□□ 1.17
LINC02248-201ENST00000450324 MYO15BQ96JP2 1530 aa22.24■■□□□ 1.15
LINC02248-201ENST00000450324 DCAF8L2P0C7V8 631 aa22.17■■□□□ 1.14
LINC02248-201ENST00000450324 ZCCHC6Q5VYS8 1495 aaKnown RBP22.08■■□□□ 1.12
LINC02248-201ENST00000450324 DCAF1Q9Y4B6 1507 aa22.03■■□□□ 1.12
LINC02248-201ENST00000450324 UNC13AQ9UPW8 1703 aa21.92■■□□□ 1.1
LINC02248-201ENST00000450324 BICRAQ9NZM4 1560 aa21.75■■□□□ 1.07
LINC02248-201ENST00000450324 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
LINC02248-201ENST00000450324 DNAJC5BQ9UF47 199 aa21.67■■□□□ 1.06
LINC02248-201ENST00000450324 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.04
LINC02248-201ENST00000450324 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
LINC02248-201ENST00000450324 EIF4G1Q04637 1599 aaKnown RBP21.13■□□□□ 0.97
LINC02248-201ENST00000450324 CC2D2AQ9P2K1 1620 aa21.09■□□□□ 0.97
LINC02248-201ENST00000450324 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
LINC02248-201ENST00000450324 NCAPD3P42695 1498 aa20.65■□□□□ 0.9
LINC02248-201ENST00000450324 SMARCA4P51532 1647 aa20.59■□□□□ 0.89
LINC02248-201ENST00000450324 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
LINC02248-201ENST00000450324 BAZ1AQ9NRL2 1556 aaPredicted RBP20.56■□□□□ 0.88
LINC02248-201ENST00000450324 PEG3Q9GZU2 1588 aa20.51■□□□□ 0.87
LINC02248-201ENST00000450324 SMARCA2P51531 1590 aa20.51■□□□□ 0.87
LINC02248-201ENST00000450324 HMGXB3Q12766 1538 aa20.47■□□□□ 0.87
LINC02248-201ENST00000450324 MROH2BQ7Z745 1585 aa20.41■□□□□ 0.86
LINC02248-201ENST00000450324 BAZ1BQ9UIG0 1483 aaKnown RBP20.31■□□□□ 0.84
LINC02248-201ENST00000450324 SENP3Q9H4L4 574 aaPredicted RBP20.21■□□□□ 0.83
LINC02248-201ENST00000450324 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
LINC02248-201ENST00000450324 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
LINC02248-201ENST00000450324 WIZO95785 1651 aa20.16■□□□□ 0.82
LINC02248-201ENST00000450324 LAMC3Q9Y6N6 1575 aa20.08■□□□□ 0.81
LINC02248-201ENST00000450324 NESP48681 1621 aa20.08■□□□□ 0.8
LINC02248-201ENST00000450324 CUX2O14529 1486 aa20.01■□□□□ 0.79
LINC02248-201ENST00000450324 TOP2AP11388 1531 aaKnown RBP19.99■□□□□ 0.79
LINC02248-201ENST00000450324 ERCC6Q03468 1493 aa19.99■□□□□ 0.79
LINC02248-201ENST00000450324 CADPSQ9ULU8 1353 aa19.97■□□□□ 0.79
LINC02248-201ENST00000450324 PDS5BQ9NTI5 1447 aa19.92■□□□□ 0.78
LINC02248-201ENST00000450324 THOC2Q8NI27 1593 aaKnown RBP19.87■□□□□ 0.77
LINC02248-201ENST00000450324 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
LINC02248-201ENST00000450324 CFTRP13569 1480 aa19.83■□□□□ 0.76
LINC02248-201ENST00000450324 CCDC88BA6NC98 1476 aa19.76■□□□□ 0.75
LINC02248-201ENST00000450324 DNAJC5Q9H3Z4 198 aa19.71■□□□□ 0.75
LINC02248-201ENST00000450324 MRC2Q9UBG0 1479 aa19.69■□□□□ 0.74
LINC02248-201ENST00000450324 WDR62O43379 1518 aa19.69■□□□□ 0.74
LINC02248-201ENST00000450324 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
LINC02248-201ENST00000450324 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
LINC02248-201ENST00000450324 SUPT5HO00267 1087 aaKnown RBP19.66■□□□□ 0.74
LINC02248-201ENST00000450324 CEP164Q9UPV0 1460 aa19.65■□□□□ 0.74
LINC02248-201ENST00000450324 URB2Q14146 1524 aaKnown RBP19.52■□□□□ 0.72
LINC02248-201ENST00000450324 ABCC8Q09428 1581 aa19.42■□□□□ 0.7
LINC02248-201ENST00000450324 TOPBP1Q92547 1522 aa19.36■□□□□ 0.69
LINC02248-201ENST00000450324 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
LINC02248-201ENST00000450324 IFT140Q96RY7 1462 aa19.29■□□□□ 0.68
LINC02248-201ENST00000450324 TARBP1Q13395 1621 aaKnown RBP19.23■□□□□ 0.67
LINC02248-201ENST00000450324 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
LINC02248-201ENST00000450324 POLA1P09884 1462 aaPredicted RBP19.18■□□□□ 0.66
LINC02248-201ENST00000450324 CUX1P39880 1505 aa19.15■□□□□ 0.66
LINC02248-201ENST00000450324 OSCARQ8IYS5 282 aa19.14■□□□□ 0.65
LINC02248-201ENST00000450324 FGD5Q6ZNL6 1462 aa19.1■□□□□ 0.65
LINC02248-201ENST00000450324 SOGA1O94964 1423 aa19.1■□□□□ 0.65
LINC02248-201ENST00000450324 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
LINC02248-201ENST00000450324 WDR97A6NE52 1622 aa19.09■□□□□ 0.65
LINC02248-201ENST00000450324 AQRO60306 1485 aaKnown RBP eCLIP19.07■□□□□ 0.64
LINC02248-201ENST00000450324 RAD54L2Q9Y4B4 1467 aa19.07■□□□□ 0.64
LINC02248-201ENST00000450324 WRNQ14191 1432 aaPredicted RBP eCLIP19.05■□□□□ 0.64
LINC02248-201ENST00000450324 TOP2BQ02880 1626 aa19■□□□□ 0.63
LINC02248-201ENST00000450324 TDRD9Q8NDG6 1382 aaKnown RBP18.98■□□□□ 0.63
LINC02248-201ENST00000450324 BIVM-ERCC5R4GMW8 1640 aa18.98■□□□□ 0.63
LINC02248-201ENST00000450324 ABCA10Q8WWZ4 1543 aa18.95■□□□□ 0.62
LINC02248-201ENST00000450324 SYNJ1O43426 1573 aa18.95■□□□□ 0.62
LINC02248-201ENST00000450324 CHD1O14646 1710 aa18.92■□□□□ 0.62
LINC02248-201ENST00000450324 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
LINC02248-201ENST00000450324 MAGI1Q96QZ7 1491 aaPredicted RBP18.89■□□□□ 0.61
LINC02248-201ENST00000450324 GAPVD1Q14C86 1478 aa18.87■□□□□ 0.61
LINC02248-201ENST00000450324 ABCA5Q8WWZ7 1642 aa18.87■□□□□ 0.61
LINC02248-201ENST00000450324 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
LINC02248-201ENST00000450324 PBRM1Q86U86 1689 aa18.83■□□□□ 0.61
LINC02248-201ENST00000450324 RIMBP3CA6NJZ7 1639 aa18.82■□□□□ 0.6
LINC02248-201ENST00000450324 RIMBP3BA6NNM3 1639 aa18.82■□□□□ 0.6
LINC02248-201ENST00000450324 RIMBP3Q9UFD9 1639 aa18.82■□□□□ 0.6
LINC02248-201ENST00000450324 FBLN2P98095 1184 aa18.81■□□□□ 0.6
LINC02248-201ENST00000450324 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
LINC02248-201ENST00000450324 FOXD1Q16676 465 aa18.79■□□□□ 0.6
LINC02248-201ENST00000450324 ARHGEF11O15085 1522 aa18.79■□□□□ 0.6
LINC02248-201ENST00000450324 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
LINC02248-201ENST00000450324 CLASP1Q7Z460 1538 aa18.77■□□□□ 0.6
LINC02248-201ENST00000450324 ERICH3Q5RHP9 1530 aa18.72■□□□□ 0.59
LINC02248-201ENST00000450324 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
LINC02248-201ENST00000450324 KIF27Q86VH2 1401 aa18.68■□□□□ 0.58
LINC02248-201ENST00000450324 FHAD1B1AJZ9 1412 aa18.67■□□□□ 0.58
LINC02248-201ENST00000450324 ADAMTS12P58397 1594 aa18.65■□□□□ 0.58
LINC02248-201ENST00000450324 GRIN2AQ12879 1464 aa18.65■□□□□ 0.58
LINC02248-201ENST00000450324 NUP160Q12769 1436 aa18.63■□□□□ 0.57
LINC02248-201ENST00000450324 ARAP1Q96P48 1450 aa18.62■□□□□ 0.57
LINC02248-201ENST00000450324 IGF1RP08069 1367 aa18.6■□□□□ 0.57
LINC02248-201ENST00000450324 CYB5RLQ6IPT4 315 aa18.59■□□□□ 0.57
LINC02248-201ENST00000450324 CEP170Q5SW79 1584 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms