RNA–Protein interactions for RNA: ENST00000450277.2

CCDC144B-203, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2

Gene CCDC144B, Length 689 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-203ENST00000450277 NISCHQ9Y2I1 1504 aa29.64■■■□□ 2.34
CCDC144B-203ENST00000450277 AEBP2Q6ZN18 517 aaPredicted RBP28.14■■■□□ 2.1
CCDC144B-203ENST00000450277 ABCC9O60706 1549 aa27.68■■■□□ 2.02
CCDC144B-203ENST00000450277 CHIC1Q5VXU3 224 aa27.24■■□□□ 1.95
CCDC144B-203ENST00000450277 CCDC180Q9P1Z9 1646 aa27.01■■□□□ 1.92
CCDC144B-203ENST00000450277 DNAJC5BQ9UF47 199 aa26.67■■□□□ 1.86
CCDC144B-203ENST00000450277 RB1CC1Q8TDY2 1594 aa26.07■■□□□ 1.76
CCDC144B-203ENST00000450277 NACADO15069 1562 aa25.71■■□□□ 1.71
CCDC144B-203ENST00000450277 PABPN1Q86U42 306 aaKnown RBP eCLIP25.61■■□□□ 1.69
CCDC144B-203ENST00000450277 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.67
CCDC144B-203ENST00000450277 BICRAQ9NZM4 1560 aa25.32■■□□□ 1.64
CCDC144B-203ENST00000450277 DCAF8L2P0C7V8 631 aa25.29■■□□□ 1.64
CCDC144B-203ENST00000450277 DNAJC5Q9H3Z4 198 aa25.15■■□□□ 1.62
CCDC144B-203ENST00000450277 MYO15BQ96JP2 1530 aa25.12■■□□□ 1.61
CCDC144B-203ENST00000450277 CECR2Q9BXF3 1484 aa25.05■■□□□ 1.6
CCDC144B-203ENST00000450277 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
CCDC144B-203ENST00000450277 SHROOM4Q9ULL8 1493 aa24.96■■□□□ 1.59
CCDC144B-203ENST00000450277 EIF4G1Q04637 1599 aaKnown RBP24.77■■□□□ 1.56
CCDC144B-203ENST00000450277 DCAF1Q9Y4B6 1507 aa24.48■■□□□ 1.51
CCDC144B-203ENST00000450277 SCRIBQ14160 1630 aa24.46■■□□□ 1.51
CCDC144B-203ENST00000450277 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
CCDC144B-203ENST00000450277 CUX2O14529 1486 aa24.27■■□□□ 1.48
CCDC144B-203ENST00000450277 PHF23Q9BUL5 403 aaPredicted RBP24.06■■□□□ 1.44
CCDC144B-203ENST00000450277 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
CCDC144B-203ENST00000450277 SENP3Q9H4L4 574 aaPredicted RBP23.8■■□□□ 1.4
CCDC144B-203ENST00000450277 NCAPD3P42695 1498 aa23.73■■□□□ 1.39
CCDC144B-203ENST00000450277 TRIM41Q8WV44 630 aa23.64■■□□□ 1.37
CCDC144B-203ENST00000450277 NESP48681 1621 aa23.55■■□□□ 1.36
CCDC144B-203ENST00000450277 THOC2Q8NI27 1593 aaKnown RBP23.53■■□□□ 1.36
CCDC144B-203ENST00000450277 ATAD2BQ9ULI0 1458 aa23.51■■□□□ 1.35
CCDC144B-203ENST00000450277 HMGXB3Q12766 1538 aa23.49■■□□□ 1.35
CCDC144B-203ENST00000450277 SMARCA2P51531 1590 aa23.44■■□□□ 1.34
CCDC144B-203ENST00000450277 LAMC3Q9Y6N6 1575 aa23.35■■□□□ 1.33
CCDC144B-203ENST00000450277 SMARCA4P51532 1647 aa23.3■■□□□ 1.32
CCDC144B-203ENST00000450277 KIF21AQ7Z4S6 1674 aa23.28■■□□□ 1.32
CCDC144B-203ENST00000450277 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
CCDC144B-203ENST00000450277 PDS5BQ9NTI5 1447 aa23.21■■□□□ 1.31
CCDC144B-203ENST00000450277 PEG3Q9GZU2 1588 aa23.12■■□□□ 1.29
CCDC144B-203ENST00000450277 BAZ1AQ9NRL2 1556 aaPredicted RBP23.08■■□□□ 1.29
CCDC144B-203ENST00000450277 MRC2Q9UBG0 1479 aa23.04■■□□□ 1.28
CCDC144B-203ENST00000450277 WDR62O43379 1518 aa23.03■■□□□ 1.28
CCDC144B-203ENST00000450277 OSCARQ8IYS5 282 aa23■■□□□ 1.27
CCDC144B-203ENST00000450277 CADPSQ9ULU8 1353 aa22.95■■□□□ 1.26
CCDC144B-203ENST00000450277 MROH2BQ7Z745 1585 aa22.8■■□□□ 1.24
CCDC144B-203ENST00000450277 CEP164Q9UPV0 1460 aa22.79■■□□□ 1.24
CCDC144B-203ENST00000450277 RIMBP3CA6NJZ7 1639 aa22.79■■□□□ 1.24
CCDC144B-203ENST00000450277 RIMBP3BA6NNM3 1639 aa22.79■■□□□ 1.24
CCDC144B-203ENST00000450277 RIMBP3Q9UFD9 1639 aa22.79■■□□□ 1.24
CCDC144B-203ENST00000450277 FANCD2Q9BXW9 1451 aa22.67■■□□□ 1.22
CCDC144B-203ENST00000450277 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
CCDC144B-203ENST00000450277 URB2Q14146 1524 aaKnown RBP22.53■■□□□ 1.2
CCDC144B-203ENST00000450277 CFTRP13569 1480 aa22.53■■□□□ 1.2
CCDC144B-203ENST00000450277 WIZO95785 1651 aa22.5■■□□□ 1.19
CCDC144B-203ENST00000450277 TRHP20396 242 aaPredicted RBP22.49■■□□□ 1.19
CCDC144B-203ENST00000450277 CYB5RLQ6IPT4 315 aa22.48■■□□□ 1.19
CCDC144B-203ENST00000450277 IFT140Q96RY7 1462 aa22.37■■□□□ 1.17
CCDC144B-203ENST00000450277 ZNF608Q9ULD9 1512 aaPredicted RBP22.36■■□□□ 1.17
CCDC144B-203ENST00000450277 ARAP1Q96P48 1450 aa22.33■■□□□ 1.16
CCDC144B-203ENST00000450277 PRDM2Q13029 1718 aa22.31■■□□□ 1.16
CCDC144B-203ENST00000450277 CHD1O14646 1710 aa22.25■■□□□ 1.15
CCDC144B-203ENST00000450277 EIF4G3O43432 1585 aaKnown RBP22.25■■□□□ 1.15
CCDC144B-203ENST00000450277 RSF1Q96T23 1441 aaPredicted RBP22.24■■□□□ 1.15
CCDC144B-203ENST00000450277 FOXD1Q16676 465 aa22.21■■□□□ 1.15
CCDC144B-203ENST00000450277 TOP2AP11388 1531 aaKnown RBP22.17■■□□□ 1.14
CCDC144B-203ENST00000450277 TOPBP1Q92547 1522 aa22.16■■□□□ 1.14
CCDC144B-203ENST00000450277 ABCC8Q09428 1581 aa22.12■■□□□ 1.13
CCDC144B-203ENST00000450277 PLPPR3Q6T4P5 718 aa22.1■■□□□ 1.13
CCDC144B-203ENST00000450277 FBLN2P98095 1184 aa22.06■■□□□ 1.12
CCDC144B-203ENST00000450277 AQRO60306 1485 aaKnown RBP eCLIP22.06■■□□□ 1.12
CCDC144B-203ENST00000450277 TARBP1Q13395 1621 aaKnown RBP22.05■■□□□ 1.12
CCDC144B-203ENST00000450277 DNMBPQ6XZF7 1577 aa22.03■■□□□ 1.12
CCDC144B-203ENST00000450277 CLASP1Q7Z460 1538 aa21.96■■□□□ 1.11
CCDC144B-203ENST00000450277 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
CCDC144B-203ENST00000450277 SYNJ1O43426 1573 aa21.9■■□□□ 1.1
CCDC144B-203ENST00000450277 POLA1P09884 1462 aaPredicted RBP21.88■■□□□ 1.09
CCDC144B-203ENST00000450277 WDR97A6NE52 1622 aa21.83■■□□□ 1.08
CCDC144B-203ENST00000450277 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.08
CCDC144B-203ENST00000450277 CHMP7Q8WUX9 453 aaPredicted RBP21.81■■□□□ 1.08
CCDC144B-203ENST00000450277 TDRD9Q8NDG6 1382 aaKnown RBP21.79■■□□□ 1.08
CCDC144B-203ENST00000450277 GAPVD1Q14C86 1478 aa21.78■■□□□ 1.08
CCDC144B-203ENST00000450277 MAGI1Q96QZ7 1491 aaPredicted RBP21.78■■□□□ 1.08
CCDC144B-203ENST00000450277 RAD54L2Q9Y4B4 1467 aa21.78■■□□□ 1.08
CCDC144B-203ENST00000450277 SOGA1O94964 1423 aa21.76■■□□□ 1.07
CCDC144B-203ENST00000450277 SYNJ2O15056 1496 aa21.71■■□□□ 1.07
CCDC144B-203ENST00000450277 GRIN2BQ13224 1484 aa21.68■■□□□ 1.06
CCDC144B-203ENST00000450277 FGD5Q6ZNL6 1462 aa21.62■■□□□ 1.05
CCDC144B-203ENST00000450277 KIF13AQ9H1H9 1805 aa21.58■■□□□ 1.05
CCDC144B-203ENST00000450277 ILDR1Q86SU0 546 aaPredicted RBP21.57■■□□□ 1.04
CCDC144B-203ENST00000450277 PBRM1Q86U86 1689 aa21.56■■□□□ 1.04
CCDC144B-203ENST00000450277 ERCC6L2Q5T890 1561 aa21.52■■□□□ 1.04
CCDC144B-203ENST00000450277 CUX1P39880 1505 aa21.46■■□□□ 1.03
CCDC144B-203ENST00000450277 CEP170Q5SW79 1584 aa21.44■■□□□ 1.02
CCDC144B-203ENST00000450277 GRIN2AQ12879 1464 aa21.4■■□□□ 1.02
CCDC144B-203ENST00000450277 ABCA5Q8WWZ7 1642 aa21.4■■□□□ 1.02
CCDC144B-203ENST00000450277 KDM4FA0A1W2PPD8 638 aa21.39■■□□□ 1.01
CCDC144B-203ENST00000450277 SHROOM2Q13796 1616 aa21.39■■□□□ 1.01
CCDC144B-203ENST00000450277 NUP160Q12769 1436 aa21.37■■□□□ 1.01
CCDC144B-203ENST00000450277 ABCA10Q8WWZ4 1543 aa21.35■■□□□ 1.01
CCDC144B-203ENST00000450277 ABCC10Q5T3U5 1492 aa21.32■■□□□ 1
CCDC144B-203ENST00000450277 FAM69CQ0P6D2 419 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms