RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 NISCHQ9Y2I1 1504 aa17.22■□□□□ 0.35
PBRM1-216ENST00000449505 CCDC180Q9P1Z9 1646 aa15.55■□□□□ 0.08
PBRM1-216ENST00000449505 ABCC9O60706 1549 aa15.38■□□□□ 0.05
PBRM1-216ENST00000449505 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.05
PBRM1-216ENST00000449505 NACADO15069 1562 aa14.66□□□□□ -0.06
PBRM1-216ENST00000449505 MYO15BQ96JP2 1530 aa14.49□□□□□ -0.09
PBRM1-216ENST00000449505 DCAF8L2P0C7V8 631 aa14.42□□□□□ -0.1
PBRM1-216ENST00000449505 UNC13AQ9UPW8 1703 aa14.35□□□□□ -0.11
PBRM1-216ENST00000449505 ZCCHC6Q5VYS8 1495 aaKnown RBP14.31□□□□□ -0.12
PBRM1-216ENST00000449505 DCAF1Q9Y4B6 1507 aa14.3□□□□□ -0.12
PBRM1-216ENST00000449505 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
PBRM1-216ENST00000449505 DNAJC5BQ9UF47 199 aa14.24□□□□□ -0.13
PBRM1-216ENST00000449505 SHROOM4Q9ULL8 1493 aa14.23□□□□□ -0.13
PBRM1-216ENST00000449505 BICRAQ9NZM4 1560 aa14.22□□□□□ -0.13
PBRM1-216ENST00000449505 AEBP2Q6ZN18 517 aaPredicted RBP14.11□□□□□ -0.15
PBRM1-216ENST00000449505 SCRIBQ14160 1630 aa14.08□□□□□ -0.16
PBRM1-216ENST00000449505 EIF4G1Q04637 1599 aaKnown RBP13.93□□□□□ -0.18
PBRM1-216ENST00000449505 CC2D2AQ9P2K1 1620 aa13.93□□□□□ -0.18
PBRM1-216ENST00000449505 CECR2Q9BXF3 1484 aa13.89□□□□□ -0.19
PBRM1-216ENST00000449505 NCAPD3P42695 1498 aa13.48□□□□□ -0.25
PBRM1-216ENST00000449505 SMARCA2P51531 1590 aa13.47□□□□□ -0.25
PBRM1-216ENST00000449505 SMARCA4P51532 1647 aa13.46□□□□□ -0.26
PBRM1-216ENST00000449505 HMGXB3Q12766 1538 aa13.45□□□□□ -0.26
PBRM1-216ENST00000449505 BAZ1AQ9NRL2 1556 aaPredicted RBP13.43□□□□□ -0.26
PBRM1-216ENST00000449505 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
PBRM1-216ENST00000449505 CHIC1Q5VXU3 224 aa13.37□□□□□ -0.27
PBRM1-216ENST00000449505 ERCC6Q03468 1493 aa13.36□□□□□ -0.27
PBRM1-216ENST00000449505 PEG3Q9GZU2 1588 aa13.35□□□□□ -0.27
PBRM1-216ENST00000449505 CUX2O14529 1486 aa13.35□□□□□ -0.27
PBRM1-216ENST00000449505 BAZ1BQ9UIG0 1483 aaKnown RBP13.35□□□□□ -0.27
PBRM1-216ENST00000449505 LAMC3Q9Y6N6 1575 aa13.24□□□□□ -0.29
PBRM1-216ENST00000449505 MROH2BQ7Z745 1585 aa13.23□□□□□ -0.29
PBRM1-216ENST00000449505 NESP48681 1621 aa13.18□□□□□ -0.3
PBRM1-216ENST00000449505 DNAJC5Q9H3Z4 198 aa13.17□□□□□ -0.3
PBRM1-216ENST00000449505 THOC2Q8NI27 1593 aaKnown RBP13.14□□□□□ -0.31
PBRM1-216ENST00000449505 PDS5BQ9NTI5 1447 aa13.13□□□□□ -0.31
PBRM1-216ENST00000449505 KIF21AQ7Z4S6 1674 aa13.08□□□□□ -0.31
PBRM1-216ENST00000449505 WIZO95785 1651 aa13.08□□□□□ -0.32
PBRM1-216ENST00000449505 CADPSQ9ULU8 1353 aa13.06□□□□□ -0.32
PBRM1-216ENST00000449505 MRC2Q9UBG0 1479 aa13.01□□□□□ -0.33
PBRM1-216ENST00000449505 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
PBRM1-216ENST00000449505 WDR62O43379 1518 aa12.98□□□□□ -0.33
PBRM1-216ENST00000449505 CEP164Q9UPV0 1460 aa12.98□□□□□ -0.33
PBRM1-216ENST00000449505 RSF1Q96T23 1441 aaPredicted RBP12.96□□□□□ -0.33
PBRM1-216ENST00000449505 FANCD2Q9BXW9 1451 aa12.93□□□□□ -0.34
PBRM1-216ENST00000449505 CFTRP13569 1480 aa12.92□□□□□ -0.34
PBRM1-216ENST00000449505 PRDM2Q13029 1718 aa12.89□□□□□ -0.35
PBRM1-216ENST00000449505 URB2Q14146 1524 aaKnown RBP12.78□□□□□ -0.36
PBRM1-216ENST00000449505 CCDC88BA6NC98 1476 aa12.76□□□□□ -0.37
PBRM1-216ENST00000449505 ABCC8Q09428 1581 aa12.73□□□□□ -0.37
PBRM1-216ENST00000449505 IFT140Q96RY7 1462 aa12.72□□□□□ -0.37
PBRM1-216ENST00000449505 DNMBPQ6XZF7 1577 aa12.68□□□□□ -0.38
PBRM1-216ENST00000449505 TOPBP1Q92547 1522 aa12.67□□□□□ -0.38
PBRM1-216ENST00000449505 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
PBRM1-216ENST00000449505 EIF4G3O43432 1585 aaKnown RBP12.62□□□□□ -0.39
PBRM1-216ENST00000449505 TRIM41Q8WV44 630 aa12.6□□□□□ -0.39
PBRM1-216ENST00000449505 ZNF608Q9ULD9 1512 aaPredicted RBP12.6□□□□□ -0.39
PBRM1-216ENST00000449505 WDR97A6NE52 1622 aa12.56□□□□□ -0.4
PBRM1-216ENST00000449505 TARBP1Q13395 1621 aaKnown RBP12.56□□□□□ -0.4
PBRM1-216ENST00000449505 POLA1P09884 1462 aaPredicted RBP12.55□□□□□ -0.4
PBRM1-216ENST00000449505 POTEDQ86YR6 584 aa12.53□□□□□ -0.4
PBRM1-216ENST00000449505 RIMBP3CA6NJZ7 1639 aa12.51□□□□□ -0.41
PBRM1-216ENST00000449505 RIMBP3BA6NNM3 1639 aa12.51□□□□□ -0.41
PBRM1-216ENST00000449505 RIMBP3Q9UFD9 1639 aa12.51□□□□□ -0.41
PBRM1-216ENST00000449505 CHD1O14646 1710 aa12.5□□□□□ -0.41
PBRM1-216ENST00000449505 ARHGEF11O15085 1522 aa12.49□□□□□ -0.41
PBRM1-216ENST00000449505 AQRO60306 1485 aaKnown RBP eCLIP12.47□□□□□ -0.41
PBRM1-216ENST00000449505 FGD5Q6ZNL6 1462 aa12.47□□□□□ -0.41
PBRM1-216ENST00000449505 SOGA1O94964 1423 aa12.47□□□□□ -0.41
PBRM1-216ENST00000449505 CUX1P39880 1505 aa12.44□□□□□ -0.42
PBRM1-216ENST00000449505 MAGI1Q96QZ7 1491 aaPredicted RBP12.44□□□□□ -0.42
PBRM1-216ENST00000449505 RAD54L2Q9Y4B4 1467 aa12.44□□□□□ -0.42
PBRM1-216ENST00000449505 SNAPC4Q5SXM2 1469 aa12.42□□□□□ -0.42
PBRM1-216ENST00000449505 GRIN2BQ13224 1484 aa12.41□□□□□ -0.42
PBRM1-216ENST00000449505 SYNJ1O43426 1573 aa12.41□□□□□ -0.42
PBRM1-216ENST00000449505 FBLN2P98095 1184 aa12.41□□□□□ -0.42
PBRM1-216ENST00000449505 TDRD9Q8NDG6 1382 aaKnown RBP12.41□□□□□ -0.42
PBRM1-216ENST00000449505 PBRM1Q86U86 1689 aa12.38□□□□□ -0.43
PBRM1-216ENST00000449505 SYNJ2O15056 1496 aa12.38□□□□□ -0.43
PBRM1-216ENST00000449505 SUPT5HO00267 1087 aaKnown RBP12.36□□□□□ -0.43
PBRM1-216ENST00000449505 CLASP1Q7Z460 1538 aa12.36□□□□□ -0.43
PBRM1-216ENST00000449505 ABCA10Q8WWZ4 1543 aa12.36□□□□□ -0.43
PBRM1-216ENST00000449505 GAPVD1Q14C86 1478 aa12.35□□□□□ -0.43
PBRM1-216ENST00000449505 CHMP7Q8WUX9 453 aaPredicted RBP12.35□□□□□ -0.43
PBRM1-216ENST00000449505 SENP3Q9H4L4 574 aaPredicted RBP12.35□□□□□ -0.43
PBRM1-216ENST00000449505 ABCA5Q8WWZ7 1642 aa12.35□□□□□ -0.43
PBRM1-216ENST00000449505 ARAP1Q96P48 1450 aa12.34□□□□□ -0.43
PBRM1-216ENST00000449505 WRNQ14191 1432 aaPredicted RBP eCLIP12.32□□□□□ -0.44
PBRM1-216ENST00000449505 BIVM-ERCC5R4GMW8 1640 aa12.32□□□□□ -0.44
PBRM1-216ENST00000449505 TOP2BQ02880 1626 aa12.31□□□□□ -0.44
PBRM1-216ENST00000449505 CYB5RLQ6IPT4 315 aa12.31□□□□□ -0.44
PBRM1-216ENST00000449505 ADAMTS12P58397 1594 aa12.27□□□□□ -0.44
PBRM1-216ENST00000449505 GRIN2AQ12879 1464 aa12.25□□□□□ -0.45
PBRM1-216ENST00000449505 ERICH3Q5RHP9 1530 aa12.23□□□□□ -0.45
PBRM1-216ENST00000449505 FHAD1B1AJZ9 1412 aa12.21□□□□□ -0.45
PBRM1-216ENST00000449505 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
PBRM1-216ENST00000449505 NUP160Q12769 1436 aa12.19□□□□□ -0.46
PBRM1-216ENST00000449505 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
PBRM1-216ENST00000449505 SHROOM2Q13796 1616 aa12.15□□□□□ -0.46
PBRM1-216ENST00000449505 CUL7Q14999 1698 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms