RNA–Protein interactions for RNA: ENST00000449434.6

LINC00665-204, long intergenic non-protein coding RNA 665, humanhuman

TSL 2

Gene LINC00665, Length 651 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00665-204ENST00000449434 NISCHQ9Y2I1 1504 aa23.48■■□□□ 1.35
LINC00665-204ENST00000449434 CCDC180Q9P1Z9 1646 aa21.13■□□□□ 0.97
LINC00665-204ENST00000449434 ABCC9O60706 1549 aa20.91■□□□□ 0.94
LINC00665-204ENST00000449434 RB1CC1Q8TDY2 1594 aa20.04■□□□□ 0.8
LINC00665-204ENST00000449434 NACADO15069 1562 aa19.92■□□□□ 0.78
LINC00665-204ENST00000449434 MYO15BQ96JP2 1530 aa19.7■□□□□ 0.74
LINC00665-204ENST00000449434 DCAF8L2P0C7V8 631 aa19.68■□□□□ 0.74
LINC00665-204ENST00000449434 UNC13AQ9UPW8 1703 aa19.62■□□□□ 0.73
LINC00665-204ENST00000449434 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
LINC00665-204ENST00000449434 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
LINC00665-204ENST00000449434 DCAF1Q9Y4B6 1507 aa19.46■□□□□ 0.71
LINC00665-204ENST00000449434 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
LINC00665-204ENST00000449434 BICRAQ9NZM4 1560 aa19.4■□□□□ 0.7
LINC00665-204ENST00000449434 SHROOM4Q9ULL8 1493 aa19.24■□□□□ 0.67
LINC00665-204ENST00000449434 SCRIBQ14160 1630 aa19.15■□□□□ 0.66
LINC00665-204ENST00000449434 CC2D2AQ9P2K1 1620 aa18.95■□□□□ 0.62
LINC00665-204ENST00000449434 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
LINC00665-204ENST00000449434 CECR2Q9BXF3 1484 aa18.85■□□□□ 0.61
LINC00665-204ENST00000449434 NCAPD3P42695 1498 aa18.35■□□□□ 0.53
LINC00665-204ENST00000449434 SMARCA4P51532 1647 aa18.32■□□□□ 0.52
LINC00665-204ENST00000449434 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
LINC00665-204ENST00000449434 ATAD2BQ9ULI0 1458 aa18.28■□□□□ 0.52
LINC00665-204ENST00000449434 HMGXB3Q12766 1538 aa18.26■□□□□ 0.51
LINC00665-204ENST00000449434 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
LINC00665-204ENST00000449434 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
LINC00665-204ENST00000449434 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
LINC00665-204ENST00000449434 ERCC6Q03468 1493 aa18.08■□□□□ 0.49
LINC00665-204ENST00000449434 CUX2O14529 1486 aa18.07■□□□□ 0.48
LINC00665-204ENST00000449434 MROH2BQ7Z745 1585 aa18.06■□□□□ 0.48
LINC00665-204ENST00000449434 NESP48681 1621 aa17.98■□□□□ 0.47
LINC00665-204ENST00000449434 LAMC3Q9Y6N6 1575 aa17.97■□□□□ 0.47
LINC00665-204ENST00000449434 DNAJC5Q9H3Z4 198 aa17.91■□□□□ 0.46
LINC00665-204ENST00000449434 WIZO95785 1651 aa17.87■□□□□ 0.45
LINC00665-204ENST00000449434 THOC2Q8NI27 1593 aaKnown RBP17.86■□□□□ 0.45
LINC00665-204ENST00000449434 KIF21AQ7Z4S6 1674 aa17.84■□□□□ 0.45
LINC00665-204ENST00000449434 PDS5BQ9NTI5 1447 aa17.82■□□□□ 0.44
LINC00665-204ENST00000449434 CADPSQ9ULU8 1353 aa17.78■□□□□ 0.44
LINC00665-204ENST00000449434 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
LINC00665-204ENST00000449434 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
LINC00665-204ENST00000449434 MRC2Q9UBG0 1479 aa17.66■□□□□ 0.42
LINC00665-204ENST00000449434 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
LINC00665-204ENST00000449434 WDR62O43379 1518 aa17.62■□□□□ 0.41
LINC00665-204ENST00000449434 CEP164Q9UPV0 1460 aa17.61■□□□□ 0.41
LINC00665-204ENST00000449434 CFTRP13569 1480 aa17.6■□□□□ 0.41
LINC00665-204ENST00000449434 PRDM2Q13029 1718 aa17.58■□□□□ 0.4
LINC00665-204ENST00000449434 FANCD2Q9BXW9 1451 aa17.57■□□□□ 0.4
LINC00665-204ENST00000449434 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
LINC00665-204ENST00000449434 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
LINC00665-204ENST00000449434 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
LINC00665-204ENST00000449434 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
LINC00665-204ENST00000449434 IFT140Q96RY7 1462 aa17.25■□□□□ 0.35
LINC00665-204ENST00000449434 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
LINC00665-204ENST00000449434 OSCARQ8IYS5 282 aa17.21■□□□□ 0.35
LINC00665-204ENST00000449434 ZNF608Q9ULD9 1512 aaPredicted RBP17.16■□□□□ 0.34
LINC00665-204ENST00000449434 EIF4G3O43432 1585 aaKnown RBP17.13■□□□□ 0.33
LINC00665-204ENST00000449434 TARBP1Q13395 1621 aaKnown RBP17.12■□□□□ 0.33
LINC00665-204ENST00000449434 TRIM41Q8WV44 630 aa17.11■□□□□ 0.33
LINC00665-204ENST00000449434 POLA1P09884 1462 aaPredicted RBP17.08■□□□□ 0.32
LINC00665-204ENST00000449434 WDR97A6NE52 1622 aa17.03■□□□□ 0.32
LINC00665-204ENST00000449434 CHD1O14646 1710 aa17.03■□□□□ 0.32
LINC00665-204ENST00000449434 AQRO60306 1485 aaKnown RBP eCLIP17.01■□□□□ 0.31
LINC00665-204ENST00000449434 RIMBP3CA6NJZ7 1639 aa17.01■□□□□ 0.31
LINC00665-204ENST00000449434 RIMBP3BA6NNM3 1639 aa17.01■□□□□ 0.31
LINC00665-204ENST00000449434 RIMBP3Q9UFD9 1639 aa17.01■□□□□ 0.31
LINC00665-204ENST00000449434 SOGA1O94964 1423 aa17■□□□□ 0.31
LINC00665-204ENST00000449434 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
LINC00665-204ENST00000449434 CUX1P39880 1505 aa16.97■□□□□ 0.31
LINC00665-204ENST00000449434 RAD54L2Q9Y4B4 1467 aa16.97■□□□□ 0.31
LINC00665-204ENST00000449434 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
LINC00665-204ENST00000449434 CHIC1Q5VXU3 224 aa16.92■□□□□ 0.3
LINC00665-204ENST00000449434 TDRD9Q8NDG6 1382 aaKnown RBP16.91■□□□□ 0.3
LINC00665-204ENST00000449434 SUPT5HO00267 1087 aaKnown RBP16.91■□□□□ 0.3
LINC00665-204ENST00000449434 MAGI1Q96QZ7 1491 aaPredicted RBP16.88■□□□□ 0.29
LINC00665-204ENST00000449434 SNAPC4Q5SXM2 1469 aa16.87■□□□□ 0.29
LINC00665-204ENST00000449434 FBLN2P98095 1184 aa16.87■□□□□ 0.29
LINC00665-204ENST00000449434 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
LINC00665-204ENST00000449434 PBRM1Q86U86 1689 aa16.86■□□□□ 0.29
LINC00665-204ENST00000449434 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
LINC00665-204ENST00000449434 ABCA10Q8WWZ4 1543 aa16.82■□□□□ 0.28
LINC00665-204ENST00000449434 SYNJ2O15056 1496 aa16.8■□□□□ 0.28
LINC00665-204ENST00000449434 GAPVD1Q14C86 1478 aa16.8■□□□□ 0.28
LINC00665-204ENST00000449434 CHMP7Q8WUX9 453 aaPredicted RBP16.8■□□□□ 0.28
LINC00665-204ENST00000449434 ABCA5Q8WWZ7 1642 aa16.8■□□□□ 0.28
LINC00665-204ENST00000449434 CLASP1Q7Z460 1538 aa16.8■□□□□ 0.28
LINC00665-204ENST00000449434 BIVM-ERCC5R4GMW8 1640 aa16.79■□□□□ 0.28
LINC00665-204ENST00000449434 ARAP1Q96P48 1450 aa16.77■□□□□ 0.28
LINC00665-204ENST00000449434 TOP2BQ02880 1626 aa16.77■□□□□ 0.27
LINC00665-204ENST00000449434 CYB5RLQ6IPT4 315 aa16.76■□□□□ 0.27
LINC00665-204ENST00000449434 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
LINC00665-204ENST00000449434 ADAMTS12P58397 1594 aa16.66■□□□□ 0.26
LINC00665-204ENST00000449434 GRIN2AQ12879 1464 aa16.64■□□□□ 0.25
LINC00665-204ENST00000449434 ERICH3Q5RHP9 1530 aa16.64■□□□□ 0.25
LINC00665-204ENST00000449434 FHAD1B1AJZ9 1412 aa16.6■□□□□ 0.25
LINC00665-204ENST00000449434 NUP160Q12769 1436 aa16.59■□□□□ 0.25
LINC00665-204ENST00000449434 CEP170Q5SW79 1584 aa16.57■□□□□ 0.24
LINC00665-204ENST00000449434 TRHP20396 242 aaPredicted RBP16.55■□□□□ 0.24
LINC00665-204ENST00000449434 SHROOM2Q13796 1616 aa16.54■□□□□ 0.24
LINC00665-204ENST00000449434 ERCC6L2Q5T890 1561 aa16.48■□□□□ 0.23
LINC00665-204ENST00000449434 CUL7Q14999 1698 aa16.43■□□□□ 0.22
LINC00665-204ENST00000449434 RUSC2Q8N2Y8 1516 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms