RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 NISCHQ9Y2I1 1504 aa29.71■■■□□ 2.35
HLA-DRB9-201ENST00000449413 ABCC9O60706 1549 aa26.46■■□□□ 1.83
HLA-DRB9-201ENST00000449413 CCDC180Q9P1Z9 1646 aa26.26■■□□□ 1.79
HLA-DRB9-201ENST00000449413 DNAJC5BQ9UF47 199 aa25.41■■□□□ 1.66
HLA-DRB9-201ENST00000449413 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
HLA-DRB9-201ENST00000449413 RB1CC1Q8TDY2 1594 aa24.93■■□□□ 1.58
HLA-DRB9-201ENST00000449413 DCAF1Q9Y4B6 1507 aa24.64■■□□□ 1.53
HLA-DRB9-201ENST00000449413 NACADO15069 1562 aa24.63■■□□□ 1.53
HLA-DRB9-201ENST00000449413 PABPN1Q86U42 306 aaKnown RBP eCLIP24.55■■□□□ 1.52
HLA-DRB9-201ENST00000449413 MYO15BQ96JP2 1530 aa24.46■■□□□ 1.51
HLA-DRB9-201ENST00000449413 DCAF8L2P0C7V8 631 aa24.32■■□□□ 1.48
HLA-DRB9-201ENST00000449413 UNC13AQ9UPW8 1703 aa24.23■■□□□ 1.47
HLA-DRB9-201ENST00000449413 BICRAQ9NZM4 1560 aa24.21■■□□□ 1.47
HLA-DRB9-201ENST00000449413 SCRIBQ14160 1630 aa23.97■■□□□ 1.43
HLA-DRB9-201ENST00000449413 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
HLA-DRB9-201ENST00000449413 SHROOM4Q9ULL8 1493 aa23.93■■□□□ 1.42
HLA-DRB9-201ENST00000449413 CC2D2AQ9P2K1 1620 aa23.86■■□□□ 1.41
HLA-DRB9-201ENST00000449413 DNAJC5Q9H3Z4 198 aa23.84■■□□□ 1.41
HLA-DRB9-201ENST00000449413 EIF4G1Q04637 1599 aaKnown RBP23.68■■□□□ 1.38
HLA-DRB9-201ENST00000449413 CUX2O14529 1486 aa23.14■■□□□ 1.29
HLA-DRB9-201ENST00000449413 BAZ1AQ9NRL2 1556 aaPredicted RBP23.01■■□□□ 1.27
HLA-DRB9-201ENST00000449413 SMARCA4P51532 1647 aa22.99■■□□□ 1.27
HLA-DRB9-201ENST00000449413 ERCC6Q03468 1493 aa22.92■■□□□ 1.26
HLA-DRB9-201ENST00000449413 MROH2BQ7Z745 1585 aa22.92■■□□□ 1.26
HLA-DRB9-201ENST00000449413 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
HLA-DRB9-201ENST00000449413 NCAPD3P42695 1498 aa22.79■■□□□ 1.24
HLA-DRB9-201ENST00000449413 WIZO95785 1651 aa22.77■■□□□ 1.24
HLA-DRB9-201ENST00000449413 PEG3Q9GZU2 1588 aa22.73■■□□□ 1.23
HLA-DRB9-201ENST00000449413 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
HLA-DRB9-201ENST00000449413 SMARCA2P51531 1590 aa22.63■■□□□ 1.21
HLA-DRB9-201ENST00000449413 ATAD2BQ9ULI0 1458 aa22.6■■□□□ 1.21
HLA-DRB9-201ENST00000449413 TOP2AP11388 1531 aaKnown RBP22.57■■□□□ 1.2
HLA-DRB9-201ENST00000449413 NESP48681 1621 aa22.54■■□□□ 1.2
HLA-DRB9-201ENST00000449413 HMGXB3Q12766 1538 aa22.53■■□□□ 1.2
HLA-DRB9-201ENST00000449413 TRIM41Q8WV44 630 aa22.47■■□□□ 1.19
HLA-DRB9-201ENST00000449413 BAZ1BQ9UIG0 1483 aaKnown RBP22.47■■□□□ 1.19
HLA-DRB9-201ENST00000449413 THOC2Q8NI27 1593 aaKnown RBP22.45■■□□□ 1.18
HLA-DRB9-201ENST00000449413 LAMC3Q9Y6N6 1575 aa22.32■■□□□ 1.16
HLA-DRB9-201ENST00000449413 PDS5BQ9NTI5 1447 aa22.26■■□□□ 1.15
HLA-DRB9-201ENST00000449413 CCDC88BA6NC98 1476 aa22.2■■□□□ 1.14
HLA-DRB9-201ENST00000449413 KIF21AQ7Z4S6 1674 aa22.17■■□□□ 1.14
HLA-DRB9-201ENST00000449413 MRC2Q9UBG0 1479 aa22.08■■□□□ 1.12
HLA-DRB9-201ENST00000449413 CADPSQ9ULU8 1353 aa22.06■■□□□ 1.12
HLA-DRB9-201ENST00000449413 WDR62O43379 1518 aa22.03■■□□□ 1.12
HLA-DRB9-201ENST00000449413 PRDM2Q13029 1718 aa22.01■■□□□ 1.11
HLA-DRB9-201ENST00000449413 OSCARQ8IYS5 282 aa21.97■■□□□ 1.11
HLA-DRB9-201ENST00000449413 CFTRP13569 1480 aa21.85■■□□□ 1.09
HLA-DRB9-201ENST00000449413 CEP164Q9UPV0 1460 aa21.85■■□□□ 1.09
HLA-DRB9-201ENST00000449413 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.08
HLA-DRB9-201ENST00000449413 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
HLA-DRB9-201ENST00000449413 RIMBP3CA6NJZ7 1639 aa21.67■■□□□ 1.06
HLA-DRB9-201ENST00000449413 RIMBP3BA6NNM3 1639 aa21.67■■□□□ 1.06
HLA-DRB9-201ENST00000449413 RIMBP3Q9UFD9 1639 aa21.67■■□□□ 1.06
HLA-DRB9-201ENST00000449413 URB2Q14146 1524 aaKnown RBP21.62■■□□□ 1.05
HLA-DRB9-201ENST00000449413 CHIC1Q5VXU3 224 aa21.61■■□□□ 1.05
HLA-DRB9-201ENST00000449413 ARHGEF11O15085 1522 aa21.59■■□□□ 1.05
HLA-DRB9-201ENST00000449413 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
HLA-DRB9-201ENST00000449413 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
HLA-DRB9-201ENST00000449413 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
HLA-DRB9-201ENST00000449413 TOP2BQ02880 1626 aa21.52■■□□□ 1.04
HLA-DRB9-201ENST00000449413 CUX1P39880 1505 aa21.48■■□□□ 1.03
HLA-DRB9-201ENST00000449413 CYB5RLQ6IPT4 315 aa21.47■■□□□ 1.03
HLA-DRB9-201ENST00000449413 IFT140Q96RY7 1462 aa21.46■■□□□ 1.03
HLA-DRB9-201ENST00000449413 DNMBPQ6XZF7 1577 aa21.45■■□□□ 1.02
HLA-DRB9-201ENST00000449413 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
HLA-DRB9-201ENST00000449413 TRHP20396 242 aaPredicted RBP21.42■■□□□ 1.02
HLA-DRB9-201ENST00000449413 TOPBP1Q92547 1522 aa21.35■■□□□ 1.01
HLA-DRB9-201ENST00000449413 ARAP1Q96P48 1450 aa21.33■■□□□ 1.01
HLA-DRB9-201ENST00000449413 FGD5Q6ZNL6 1462 aa21.28■■□□□ 1
HLA-DRB9-201ENST00000449413 AEBP2Q6ZN18 517 aaPredicted RBP21.28■■□□□ 1
HLA-DRB9-201ENST00000449413 EIF4G3O43432 1585 aaKnown RBP21.27■■□□□ 1
HLA-DRB9-201ENST00000449413 WDR97A6NE52 1622 aa21.24■□□□□ 0.99
HLA-DRB9-201ENST00000449413 POLA1P09884 1462 aaPredicted RBP21.22■□□□□ 0.99
HLA-DRB9-201ENST00000449413 AQRO60306 1485 aaKnown RBP eCLIP21.19■□□□□ 0.98
HLA-DRB9-201ENST00000449413 CHD1O14646 1710 aa21.17■□□□□ 0.98
HLA-DRB9-201ENST00000449413 FBLN2P98095 1184 aa21.16■□□□□ 0.98
HLA-DRB9-201ENST00000449413 TARBP1Q13395 1621 aaKnown RBP21.13■□□□□ 0.97
HLA-DRB9-201ENST00000449413 SOGA1O94964 1423 aa21.12■□□□□ 0.97
HLA-DRB9-201ENST00000449413 EEA1Q15075 1411 aa21.12■□□□□ 0.97
HLA-DRB9-201ENST00000449413 ABCA10Q8WWZ4 1543 aa21.1■□□□□ 0.97
HLA-DRB9-201ENST00000449413 RAD54L2Q9Y4B4 1467 aa21.07■□□□□ 0.96
HLA-DRB9-201ENST00000449413 RUSC2Q8N2Y8 1516 aa21.06■□□□□ 0.96
HLA-DRB9-201ENST00000449413 ABCA5Q8WWZ7 1642 aa21.06■□□□□ 0.96
HLA-DRB9-201ENST00000449413 KIF27Q86VH2 1401 aa21.02■□□□□ 0.96
HLA-DRB9-201ENST00000449413 CLASP1Q7Z460 1538 aa21.01■□□□□ 0.95
HLA-DRB9-201ENST00000449413 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
HLA-DRB9-201ENST00000449413 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
HLA-DRB9-201ENST00000449413 KIF21BO75037 1637 aa20.96■□□□□ 0.95
HLA-DRB9-201ENST00000449413 FAM9AQ8IZU1 332 aaPredicted RBP20.95■□□□□ 0.94
HLA-DRB9-201ENST00000449413 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
HLA-DRB9-201ENST00000449413 CHMP7Q8WUX9 453 aaPredicted RBP20.94■□□□□ 0.94
HLA-DRB9-201ENST00000449413 CUL7Q14999 1698 aa20.92■□□□□ 0.94
HLA-DRB9-201ENST00000449413 MAGI1Q96QZ7 1491 aaPredicted RBP20.9■□□□□ 0.94
HLA-DRB9-201ENST00000449413 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
HLA-DRB9-201ENST00000449413 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
HLA-DRB9-201ENST00000449413 SYNJ2O15056 1496 aa20.84■□□□□ 0.93
HLA-DRB9-201ENST00000449413 CSRNP3Q8WYN3 585 aa20.84■□□□□ 0.93
HLA-DRB9-201ENST00000449413 GRIN2BQ13224 1484 aa20.83■□□□□ 0.93
HLA-DRB9-201ENST00000449413 GOLGA3Q08378 1498 aa20.82■□□□□ 0.92
HLA-DRB9-201ENST00000449413 PRXQ9BXM0 1461 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms