RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 NISCHQ9Y2I1 1504 aa42.15■■■■■ 4.34
HLCS-205ENST00000448340 ABCC9O60706 1549 aa38.09■■■■□ 3.69
HLCS-205ENST00000448340 CCDC180Q9P1Z9 1646 aa37.63■■■■□ 3.61
HLCS-205ENST00000448340 DNAJC5BQ9UF47 199 aa36.25■■■■□ 3.39
HLCS-205ENST00000448340 RB1CC1Q8TDY2 1594 aa36.04■■■■□ 3.36
HLCS-205ENST00000448340 NACADO15069 1562 aa35.75■■■■□ 3.31
HLCS-205ENST00000448340 DCAF8L2P0C7V8 631 aa35.46■■■■□ 3.27
HLCS-205ENST00000448340 PABPN1Q86U42 306 aaKnown RBP eCLIP35.46■■■■□ 3.27
HLCS-205ENST00000448340 MYO15BQ96JP2 1530 aa35.2■■■■□ 3.23
HLCS-205ENST00000448340 ZCCHC6Q5VYS8 1495 aaKnown RBP35.19■■■■□ 3.22
HLCS-205ENST00000448340 UNC13AQ9UPW8 1703 aa35.15■■■■□ 3.22
HLCS-205ENST00000448340 BICRAQ9NZM4 1560 aa35.1■■■■□ 3.21
HLCS-205ENST00000448340 DCAF1Q9Y4B6 1507 aa34.92■■■■□ 3.18
HLCS-205ENST00000448340 SHROOM4Q9ULL8 1493 aa34.55■■■■□ 3.12
HLCS-205ENST00000448340 CECR2Q9BXF3 1484 aa34.37■■■■□ 3.09
HLCS-205ENST00000448340 CC2D2AQ9P2K1 1620 aa34.37■■■■□ 3.09
HLCS-205ENST00000448340 SCRIBQ14160 1630 aa34.27■■■■□ 3.08
HLCS-205ENST00000448340 EIF4G1Q04637 1599 aaKnown RBP34.22■■■■□ 3.07
HLCS-205ENST00000448340 DNAJC5Q9H3Z4 198 aa33.52■■■□□ 2.96
HLCS-205ENST00000448340 NCAPD3P42695 1498 aa33.1■■■□□ 2.89
HLCS-205ENST00000448340 CUX2O14529 1486 aa32.99■■■□□ 2.87
HLCS-205ENST00000448340 ATAD2BQ9ULI0 1458 aa32.91■■■□□ 2.86
HLCS-205ENST00000448340 ERCC6Q03468 1493 aa32.86■■■□□ 2.85
HLCS-205ENST00000448340 HMGXB3Q12766 1538 aa32.72■■■□□ 2.83
HLCS-205ENST00000448340 SMARCA2P51531 1590 aa32.72■■■□□ 2.83
HLCS-205ENST00000448340 SMARCA4P51532 1647 aa32.69■■■□□ 2.82
HLCS-205ENST00000448340 BAZ1AQ9NRL2 1556 aaPredicted RBP32.65■■■□□ 2.82
HLCS-205ENST00000448340 NESP48681 1621 aa32.65■■■□□ 2.82
HLCS-205ENST00000448340 BAZ1BQ9UIG0 1483 aaKnown RBP32.48■■■□□ 2.79
HLCS-205ENST00000448340 MROH2BQ7Z745 1585 aa32.48■■■□□ 2.79
HLCS-205ENST00000448340 PEG3Q9GZU2 1588 aa32.45■■■□□ 2.78
HLCS-205ENST00000448340 THOC2Q8NI27 1593 aaKnown RBP32.34■■■□□ 2.77
HLCS-205ENST00000448340 LAMC3Q9Y6N6 1575 aa32.29■■■□□ 2.76
HLCS-205ENST00000448340 RSF1Q96T23 1441 aaPredicted RBP32.26■■■□□ 2.75
HLCS-205ENST00000448340 PDS5BQ9NTI5 1447 aa32.17■■■□□ 2.74
HLCS-205ENST00000448340 WIZO95785 1651 aa32.15■■■□□ 2.74
HLCS-205ENST00000448340 KIF21AQ7Z4S6 1674 aa32.08■■■□□ 2.73
HLCS-205ENST00000448340 CADPSQ9ULU8 1353 aa32.05■■■□□ 2.72
HLCS-205ENST00000448340 MRC2Q9UBG0 1479 aa31.89■■■□□ 2.7
HLCS-205ENST00000448340 WDR62O43379 1518 aa31.84■■■□□ 2.69
HLCS-205ENST00000448340 TOP2AP11388 1531 aaKnown RBP31.84■■■□□ 2.69
HLCS-205ENST00000448340 TRIM41Q8WV44 630 aa31.76■■■□□ 2.67
HLCS-205ENST00000448340 SUPT5HO00267 1087 aaKnown RBP31.71■■■□□ 2.67
HLCS-205ENST00000448340 CEP164Q9UPV0 1460 aa31.66■■■□□ 2.66
HLCS-205ENST00000448340 FANCD2Q9BXW9 1451 aa31.64■■■□□ 2.66
HLCS-205ENST00000448340 CFTRP13569 1480 aa31.61■■■□□ 2.65
HLCS-205ENST00000448340 CCDC88BA6NC98 1476 aa31.47■■■□□ 2.63
HLCS-205ENST00000448340 OSCARQ8IYS5 282 aa31.47■■■□□ 2.63
HLCS-205ENST00000448340 URB2Q14146 1524 aaKnown RBP31.43■■■□□ 2.62
HLCS-205ENST00000448340 ZNF608Q9ULD9 1512 aaPredicted RBP31.11■■■□□ 2.57
HLCS-205ENST00000448340 IFT140Q96RY7 1462 aa31.08■■■□□ 2.57
HLCS-205ENST00000448340 PRDM2Q13029 1718 aa31.05■■■□□ 2.56
HLCS-205ENST00000448340 RIMBP3CA6NJZ7 1639 aa31.02■■■□□ 2.56
HLCS-205ENST00000448340 RIMBP3BA6NNM3 1639 aa31.02■■■□□ 2.56
HLCS-205ENST00000448340 RIMBP3Q9UFD9 1639 aa31.02■■■□□ 2.56
HLCS-205ENST00000448340 TOPBP1Q92547 1522 aa31■■■□□ 2.55
HLCS-205ENST00000448340 ARHGEF11O15085 1522 aa30.92■■■□□ 2.54
HLCS-205ENST00000448340 ABCC8Q09428 1581 aa30.88■■■□□ 2.53
HLCS-205ENST00000448340 EIF4G3O43432 1585 aaKnown RBP30.82■■■□□ 2.52
HLCS-205ENST00000448340 DNMBPQ6XZF7 1577 aa30.8■■■□□ 2.52
HLCS-205ENST00000448340 AQRO60306 1485 aaKnown RBP eCLIP30.78■■■□□ 2.52
HLCS-205ENST00000448340 CYB5RLQ6IPT4 315 aa30.75■■■□□ 2.51
HLCS-205ENST00000448340 TARBP1Q13395 1621 aaKnown RBP30.74■■■□□ 2.51
HLCS-205ENST00000448340 POLA1P09884 1462 aaPredicted RBP30.67■■■□□ 2.5
HLCS-205ENST00000448340 ARAP1Q96P48 1450 aa30.62■■■□□ 2.49
HLCS-205ENST00000448340 CHD1O14646 1710 aa30.6■■■□□ 2.49
HLCS-205ENST00000448340 FBLN2P98095 1184 aa30.58■■■□□ 2.49
HLCS-205ENST00000448340 RAD54L2Q9Y4B4 1467 aa30.57■■■□□ 2.48
HLCS-205ENST00000448340 TDRD9Q8NDG6 1382 aaKnown RBP30.54■■■□□ 2.48
HLCS-205ENST00000448340 SOGA1O94964 1423 aa30.53■■■□□ 2.48
HLCS-205ENST00000448340 TRHP20396 242 aaPredicted RBP30.45■■■□□ 2.47
HLCS-205ENST00000448340 CUX1P39880 1505 aa30.44■■■□□ 2.46
HLCS-205ENST00000448340 WRNQ14191 1432 aaPredicted RBP eCLIP30.4■■■□□ 2.46
HLCS-205ENST00000448340 SNAPC4Q5SXM2 1469 aa30.4■■■□□ 2.46
HLCS-205ENST00000448340 FGD5Q6ZNL6 1462 aa30.39■■■□□ 2.46
HLCS-205ENST00000448340 CLASP1Q7Z460 1538 aa30.37■■■□□ 2.45
HLCS-205ENST00000448340 WDR97A6NE52 1622 aa30.35■■■□□ 2.45
HLCS-205ENST00000448340 CHMP7Q8WUX9 453 aaPredicted RBP30.33■■■□□ 2.45
HLCS-205ENST00000448340 MAGI1Q96QZ7 1491 aaPredicted RBP30.31■■■□□ 2.44
HLCS-205ENST00000448340 TOP2BQ02880 1626 aa30.3■■■□□ 2.44
HLCS-205ENST00000448340 SYNJ1O43426 1573 aa30.29■■■□□ 2.44
HLCS-205ENST00000448340 BIVM-ERCC5R4GMW8 1640 aa30.29■■■□□ 2.44
HLCS-205ENST00000448340 GRIN2BQ13224 1484 aa30.28■■■□□ 2.44
HLCS-205ENST00000448340 SYNJ2O15056 1496 aa30.23■■■□□ 2.43
HLCS-205ENST00000448340 GAPVD1Q14C86 1478 aa30.12■■■□□ 2.41
HLCS-205ENST00000448340 ABCA10Q8WWZ4 1543 aa30.06■■■□□ 2.4
HLCS-205ENST00000448340 PBRM1Q86U86 1689 aa30■■■□□ 2.39
HLCS-205ENST00000448340 ABCA5Q8WWZ7 1642 aa30■■■□□ 2.39
HLCS-205ENST00000448340 GRIN2AQ12879 1464 aa29.89■■■□□ 2.38
HLCS-205ENST00000448340 ERCC6L2Q5T890 1561 aa29.89■■■□□ 2.38
HLCS-205ENST00000448340 NUP160Q12769 1436 aa29.86■■■□□ 2.37
HLCS-205ENST00000448340 CHIC1Q5VXU3 224 aa29.84■■■□□ 2.37
HLCS-205ENST00000448340 AEBP2Q6ZN18 517 aaPredicted RBP29.81■■■□□ 2.36
HLCS-205ENST00000448340 CEP170Q5SW79 1584 aa29.8■■■□□ 2.36
HLCS-205ENST00000448340 ADAMTS12P58397 1594 aa29.78■■■□□ 2.36
HLCS-205ENST00000448340 KIF27Q86VH2 1401 aa29.76■■■□□ 2.35
HLCS-205ENST00000448340 FHAD1B1AJZ9 1412 aa29.74■■■□□ 2.35
HLCS-205ENST00000448340 SHROOM2Q13796 1616 aa29.71■■■□□ 2.35
HLCS-205ENST00000448340 ERICH3Q5RHP9 1530 aa29.68■■■□□ 2.34
HLCS-205ENST00000448340 IGF1RP08069 1367 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms