RNA–Protein interactions for RNA: ENST00000448333.1

KCTD3-202, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 2

Gene KCTD3, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-202ENST00000448333 NISCHQ9Y2I1 1504 aa23.6■■□□□ 1.37
KCTD3-202ENST00000448333 CCDC180Q9P1Z9 1646 aa21.01■□□□□ 0.95
KCTD3-202ENST00000448333 ABCC9O60706 1549 aa21.01■□□□□ 0.95
KCTD3-202ENST00000448333 DCAF8L2P0C7V8 631 aa20.11■□□□□ 0.81
KCTD3-202ENST00000448333 RB1CC1Q8TDY2 1594 aa20■□□□□ 0.79
KCTD3-202ENST00000448333 NACADO15069 1562 aa19.88■□□□□ 0.77
KCTD3-202ENST00000448333 AEBP2Q6ZN18 517 aaPredicted RBP19.71■□□□□ 0.75
KCTD3-202ENST00000448333 PABPN1Q86U42 306 aaKnown RBP eCLIP19.67■□□□□ 0.74
KCTD3-202ENST00000448333 MYO15BQ96JP2 1530 aa19.6■□□□□ 0.73
KCTD3-202ENST00000448333 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
KCTD3-202ENST00000448333 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
KCTD3-202ENST00000448333 UNC13AQ9UPW8 1703 aa19.5■□□□□ 0.71
KCTD3-202ENST00000448333 DCAF1Q9Y4B6 1507 aa19.43■□□□□ 0.7
KCTD3-202ENST00000448333 BICRAQ9NZM4 1560 aa19.36■□□□□ 0.69
KCTD3-202ENST00000448333 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
KCTD3-202ENST00000448333 SHROOM4Q9ULL8 1493 aa19.06■□□□□ 0.64
KCTD3-202ENST00000448333 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
KCTD3-202ENST00000448333 EIF4G1Q04637 1599 aaKnown RBP18.91■□□□□ 0.62
KCTD3-202ENST00000448333 CECR2Q9BXF3 1484 aa18.88■□□□□ 0.61
KCTD3-202ENST00000448333 CHIC1Q5VXU3 224 aa18.4■□□□□ 0.54
KCTD3-202ENST00000448333 NCAPD3P42695 1498 aa18.36■□□□□ 0.53
KCTD3-202ENST00000448333 SMARCA4P51532 1647 aa18.36■□□□□ 0.53
KCTD3-202ENST00000448333 ATAD2BQ9ULI0 1458 aa18.36■□□□□ 0.53
KCTD3-202ENST00000448333 BAZ1AQ9NRL2 1556 aaPredicted RBP18.3■□□□□ 0.52
KCTD3-202ENST00000448333 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
KCTD3-202ENST00000448333 MROH2BQ7Z745 1585 aa18.22■□□□□ 0.51
KCTD3-202ENST00000448333 BAZ1BQ9UIG0 1483 aaKnown RBP18.21■□□□□ 0.51
KCTD3-202ENST00000448333 HMGXB3Q12766 1538 aa18.2■□□□□ 0.5
KCTD3-202ENST00000448333 ERCC6Q03468 1493 aa18.14■□□□□ 0.5
KCTD3-202ENST00000448333 PEG3Q9GZU2 1588 aa18.12■□□□□ 0.49
KCTD3-202ENST00000448333 NESP48681 1621 aa18.08■□□□□ 0.48
KCTD3-202ENST00000448333 WIZO95785 1651 aa18.01■□□□□ 0.47
KCTD3-202ENST00000448333 CUX2O14529 1486 aa17.94■□□□□ 0.46
KCTD3-202ENST00000448333 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
KCTD3-202ENST00000448333 LAMC3Q9Y6N6 1575 aa17.91■□□□□ 0.46
KCTD3-202ENST00000448333 CADPSQ9ULU8 1353 aa17.87■□□□□ 0.45
KCTD3-202ENST00000448333 PDS5BQ9NTI5 1447 aa17.87■□□□□ 0.45
KCTD3-202ENST00000448333 DNAJC5Q9H3Z4 198 aa17.8■□□□□ 0.44
KCTD3-202ENST00000448333 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
KCTD3-202ENST00000448333 THOC2Q8NI27 1593 aaKnown RBP17.76■□□□□ 0.43
KCTD3-202ENST00000448333 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
KCTD3-202ENST00000448333 MRC2Q9UBG0 1479 aa17.67■□□□□ 0.42
KCTD3-202ENST00000448333 CFTRP13569 1480 aa17.66■□□□□ 0.42
KCTD3-202ENST00000448333 FANCD2Q9BXW9 1451 aa17.66■□□□□ 0.42
KCTD3-202ENST00000448333 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
KCTD3-202ENST00000448333 CCDC88BA6NC98 1476 aa17.61■□□□□ 0.41
KCTD3-202ENST00000448333 WDR62O43379 1518 aa17.57■□□□□ 0.4
KCTD3-202ENST00000448333 URB2Q14146 1524 aaKnown RBP17.48■□□□□ 0.39
KCTD3-202ENST00000448333 SUPT5HO00267 1087 aaKnown RBP17.45■□□□□ 0.38
KCTD3-202ENST00000448333 PRDM2Q13029 1718 aa17.43■□□□□ 0.38
KCTD3-202ENST00000448333 TOPBP1Q92547 1522 aa17.33■□□□□ 0.37
KCTD3-202ENST00000448333 ABCC8Q09428 1581 aa17.29■□□□□ 0.36
KCTD3-202ENST00000448333 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
KCTD3-202ENST00000448333 IFT140Q96RY7 1462 aa17.28■□□□□ 0.36
KCTD3-202ENST00000448333 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
KCTD3-202ENST00000448333 DNMBPQ6XZF7 1577 aa17.26■□□□□ 0.35
KCTD3-202ENST00000448333 TRIM41Q8WV44 630 aa17.23■□□□□ 0.35
KCTD3-202ENST00000448333 AQRO60306 1485 aaKnown RBP eCLIP17.17■□□□□ 0.341e-7■■■□□ 17.9
KCTD3-202ENST00000448333 POLA1P09884 1462 aaPredicted RBP17.17■□□□□ 0.34
KCTD3-202ENST00000448333 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
KCTD3-202ENST00000448333 SOGA1O94964 1423 aa17.14■□□□□ 0.33
KCTD3-202ENST00000448333 FBLN2P98095 1184 aa17.14■□□□□ 0.33
KCTD3-202ENST00000448333 EIF4G3O43432 1585 aaKnown RBP17.13■□□□□ 0.33
KCTD3-202ENST00000448333 TARBP1Q13395 1621 aaKnown RBP17.11■□□□□ 0.33
KCTD3-202ENST00000448333 TDRD9Q8NDG6 1382 aaKnown RBP17.11■□□□□ 0.33
KCTD3-202ENST00000448333 FGD5Q6ZNL6 1462 aa17.1■□□□□ 0.33
KCTD3-202ENST00000448333 CUX1P39880 1505 aa17.09■□□□□ 0.33
KCTD3-202ENST00000448333 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
KCTD3-202ENST00000448333 CHD1O14646 1710 aa16.97■□□□□ 0.31
KCTD3-202ENST00000448333 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
KCTD3-202ENST00000448333 SNAPC4Q5SXM2 1469 aa16.97■□□□□ 0.31
KCTD3-202ENST00000448333 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
KCTD3-202ENST00000448333 RIMBP3CA6NJZ7 1639 aa16.93■□□□□ 0.3
KCTD3-202ENST00000448333 RIMBP3BA6NNM3 1639 aa16.93■□□□□ 0.3
KCTD3-202ENST00000448333 RIMBP3Q9UFD9 1639 aa16.93■□□□□ 0.3
KCTD3-202ENST00000448333 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
KCTD3-202ENST00000448333 CYB5RLQ6IPT4 315 aa16.91■□□□□ 0.3
KCTD3-202ENST00000448333 WDR97A6NE52 1622 aa16.91■□□□□ 0.3
KCTD3-202ENST00000448333 GAPVD1Q14C86 1478 aa16.91■□□□□ 0.3
KCTD3-202ENST00000448333 ARHGEF11O15085 1522 aa16.91■□□□□ 0.3
KCTD3-202ENST00000448333 MAGI1Q96QZ7 1491 aaPredicted RBP16.88■□□□□ 0.29
KCTD3-202ENST00000448333 ABCA10Q8WWZ4 1543 aa16.88■□□□□ 0.29
KCTD3-202ENST00000448333 SYNJ1O43426 1573 aa16.85■□□□□ 0.29
KCTD3-202ENST00000448333 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
KCTD3-202ENST00000448333 SYNJ2O15056 1496 aa16.84■□□□□ 0.29
KCTD3-202ENST00000448333 PBRM1Q86U86 1689 aa16.83■□□□□ 0.28
KCTD3-202ENST00000448333 BIVM-ERCC5R4GMW8 1640 aa16.82■□□□□ 0.28
KCTD3-202ENST00000448333 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
KCTD3-202ENST00000448333 ARAP1Q96P48 1450 aa16.75■□□□□ 0.27
KCTD3-202ENST00000448333 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
KCTD3-202ENST00000448333 GRIN2AQ12879 1464 aa16.7■□□□□ 0.26
KCTD3-202ENST00000448333 TRHP20396 242 aaPredicted RBP16.7■□□□□ 0.26
KCTD3-202ENST00000448333 FHAD1B1AJZ9 1412 aa16.7■□□□□ 0.26
KCTD3-202ENST00000448333 ADAMTS12P58397 1594 aa16.68■□□□□ 0.26
KCTD3-202ENST00000448333 ERICH3Q5RHP9 1530 aa16.66■□□□□ 0.26
KCTD3-202ENST00000448333 POTEDQ86YR6 584 aa16.63■□□□□ 0.25
KCTD3-202ENST00000448333 CEP170Q5SW79 1584 aa16.62■□□□□ 0.25
KCTD3-202ENST00000448333 NUP160Q12769 1436 aa16.62■□□□□ 0.25
KCTD3-202ENST00000448333 PHF23Q9BUL5 403 aaPredicted RBP16.6■□□□□ 0.25
KCTD3-202ENST00000448333 KIF27Q86VH2 1401 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms