RNA–Protein interactions for RNA: ENST00000448243.5

CCDC18-206, Transcript of coiled-coil domain containing 18, humanhuman

TSL 2

Gene CCDC18, Length 496 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-206ENST00000448243 NISCHQ9Y2I1 1504 aa33.9■■■■□ 3.02
CCDC18-206ENST00000448243 ABCC9O60706 1549 aa30.57■■■□□ 2.49
CCDC18-206ENST00000448243 CCDC180Q9P1Z9 1646 aa30.47■■■□□ 2.47
CCDC18-206ENST00000448243 RB1CC1Q8TDY2 1594 aa29.11■■■□□ 2.25
CCDC18-206ENST00000448243 NACADO15069 1562 aa28.88■■■□□ 2.21
CCDC18-206ENST00000448243 DCAF8L2P0C7V8 631 aa28.74■■■□□ 2.19
CCDC18-206ENST00000448243 DNAJC5BQ9UF47 199 aa28.7■■■□□ 2.18
CCDC18-206ENST00000448243 MYO15BQ96JP2 1530 aa28.46■■■□□ 2.15
CCDC18-206ENST00000448243 PABPN1Q86U42 306 aaKnown RBP eCLIP28.45■■■□□ 2.14
CCDC18-206ENST00000448243 UNC13AQ9UPW8 1703 aa28.27■■■□□ 2.12
CCDC18-206ENST00000448243 BICRAQ9NZM4 1560 aa28.14■■■□□ 2.1
CCDC18-206ENST00000448243 ZCCHC6Q5VYS8 1495 aaKnown RBP28.07■■■□□ 2.08
CCDC18-206ENST00000448243 DCAF1Q9Y4B6 1507 aa28.04■■■□□ 2.08
CCDC18-206ENST00000448243 SHROOM4Q9ULL8 1493 aa27.94■■■□□ 2.06
CCDC18-206ENST00000448243 SCRIBQ14160 1630 aa27.73■■■□□ 2.03
CCDC18-206ENST00000448243 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
CCDC18-206ENST00000448243 CECR2Q9BXF3 1484 aa27.59■■■□□ 2.01
CCDC18-206ENST00000448243 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
CCDC18-206ENST00000448243 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
CCDC18-206ENST00000448243 DNAJC5Q9H3Z4 198 aa26.55■■□□□ 1.84
CCDC18-206ENST00000448243 ATAD2BQ9ULI0 1458 aa26.53■■□□□ 1.84
CCDC18-206ENST00000448243 SMARCA2P51531 1590 aa26.51■■□□□ 1.83
CCDC18-206ENST00000448243 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
CCDC18-206ENST00000448243 CUX2O14529 1486 aa26.47■■□□□ 1.83
CCDC18-206ENST00000448243 SMARCA4P51532 1647 aa26.46■■□□□ 1.83
CCDC18-206ENST00000448243 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
CCDC18-206ENST00000448243 BAZ1AQ9NRL2 1556 aaPredicted RBP26.37■■□□□ 1.81
CCDC18-206ENST00000448243 BAZ1BQ9UIG0 1483 aaKnown RBP26.31■■□□□ 1.8
CCDC18-206ENST00000448243 PEG3Q9GZU2 1588 aa26.21■■□□□ 1.79
CCDC18-206ENST00000448243 NESP48681 1621 aa26.18■■□□□ 1.78
CCDC18-206ENST00000448243 MROH2BQ7Z745 1585 aa26.08■■□□□ 1.77
CCDC18-206ENST00000448243 LAMC3Q9Y6N6 1575 aa26.07■■□□□ 1.76
CCDC18-206ENST00000448243 PDS5BQ9NTI5 1447 aa25.99■■□□□ 1.75
CCDC18-206ENST00000448243 THOC2Q8NI27 1593 aaKnown RBP25.95■■□□□ 1.75
CCDC18-206ENST00000448243 CADPSQ9ULU8 1353 aa25.85■■□□□ 1.73
CCDC18-206ENST00000448243 KIF21AQ7Z4S6 1674 aa25.83■■□□□ 1.73
CCDC18-206ENST00000448243 WIZO95785 1651 aa25.74■■□□□ 1.71
CCDC18-206ENST00000448243 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
CCDC18-206ENST00000448243 WDR62O43379 1518 aa25.63■■□□□ 1.69
CCDC18-206ENST00000448243 CEP164Q9UPV0 1460 aa25.61■■□□□ 1.69
CCDC18-206ENST00000448243 FANCD2Q9BXW9 1451 aa25.55■■□□□ 1.68
CCDC18-206ENST00000448243 RSF1Q96T23 1441 aaPredicted RBP25.54■■□□□ 1.68
CCDC18-206ENST00000448243 CFTRP13569 1480 aa25.52■■□□□ 1.68
CCDC18-206ENST00000448243 TOP2AP11388 1531 aaKnown RBP25.48■■□□□ 1.67
CCDC18-206ENST00000448243 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
CCDC18-206ENST00000448243 URB2Q14146 1524 aaKnown RBP25.29■■□□□ 1.64
CCDC18-206ENST00000448243 OSCARQ8IYS5 282 aa25.27■■□□□ 1.64
CCDC18-206ENST00000448243 PRDM2Q13029 1718 aa25.17■■□□□ 1.62
CCDC18-206ENST00000448243 CCDC88BA6NC98 1476 aa25.17■■□□□ 1.62
CCDC18-206ENST00000448243 IFT140Q96RY7 1462 aa25.11■■□□□ 1.61
CCDC18-206ENST00000448243 ABCC8Q09428 1581 aa25.06■■□□□ 1.6
CCDC18-206ENST00000448243 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
CCDC18-206ENST00000448243 ZNF608Q9ULD9 1512 aaPredicted RBP24.98■■□□□ 1.59
CCDC18-206ENST00000448243 DNMBPQ6XZF7 1577 aa24.93■■□□□ 1.58
CCDC18-206ENST00000448243 EIF4G3O43432 1585 aaKnown RBP24.86■■□□□ 1.57
CCDC18-206ENST00000448243 RIMBP3CA6NJZ7 1639 aa24.83■■□□□ 1.57
CCDC18-206ENST00000448243 RIMBP3BA6NNM3 1639 aa24.83■■□□□ 1.57
CCDC18-206ENST00000448243 RIMBP3Q9UFD9 1639 aa24.83■■□□□ 1.57
CCDC18-206ENST00000448243 ARHGEF11O15085 1522 aa24.79■■□□□ 1.56
CCDC18-206ENST00000448243 AQRO60306 1485 aaKnown RBP eCLIP24.77■■□□□ 1.56
CCDC18-206ENST00000448243 TARBP1Q13395 1621 aaKnown RBP24.77■■□□□ 1.56
CCDC18-206ENST00000448243 POLA1P09884 1462 aaPredicted RBP24.77■■□□□ 1.56
CCDC18-206ENST00000448243 FBLN2P98095 1184 aa24.73■■□□□ 1.55
CCDC18-206ENST00000448243 SOGA1O94964 1423 aa24.69■■□□□ 1.54
CCDC18-206ENST00000448243 CHD1O14646 1710 aa24.65■■□□□ 1.54
CCDC18-206ENST00000448243 CYB5RLQ6IPT4 315 aa24.65■■□□□ 1.54
CCDC18-206ENST00000448243 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.54
CCDC18-206ENST00000448243 TDRD9Q8NDG6 1382 aaKnown RBP24.63■■□□□ 1.53
CCDC18-206ENST00000448243 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
CCDC18-206ENST00000448243 FGD5Q6ZNL6 1462 aa24.59■■□□□ 1.53
CCDC18-206ENST00000448243 CHMP7Q8WUX9 453 aaPredicted RBP24.54■■□□□ 1.52
CCDC18-206ENST00000448243 SNAPC4Q5SXM2 1469 aa24.53■■□□□ 1.52
CCDC18-206ENST00000448243 CUX1P39880 1505 aa24.52■■□□□ 1.52
CCDC18-206ENST00000448243 MAGI1Q96QZ7 1491 aaPredicted RBP24.51■■□□□ 1.51
CCDC18-206ENST00000448243 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
CCDC18-206ENST00000448243 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
CCDC18-206ENST00000448243 AEBP2Q6ZN18 517 aaPredicted RBP24.47■■□□□ 1.51
CCDC18-206ENST00000448243 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
CCDC18-206ENST00000448243 TRHP20396 242 aaPredicted RBP24.46■■□□□ 1.51
CCDC18-206ENST00000448243 SYNJ2O15056 1496 aa24.43■■□□□ 1.5
CCDC18-206ENST00000448243 CLASP1Q7Z460 1538 aa24.41■■□□□ 1.5
CCDC18-206ENST00000448243 GAPVD1Q14C86 1478 aa24.38■■□□□ 1.49
CCDC18-206ENST00000448243 SUPT5HO00267 1087 aaKnown RBP24.38■■□□□ 1.49
CCDC18-206ENST00000448243 ABCA10Q8WWZ4 1543 aa24.33■■□□□ 1.49
CCDC18-206ENST00000448243 PBRM1Q86U86 1689 aa24.3■■□□□ 1.48
CCDC18-206ENST00000448243 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
CCDC18-206ENST00000448243 ABCA5Q8WWZ7 1642 aa24.25■■□□□ 1.47
CCDC18-206ENST00000448243 GRIN2AQ12879 1464 aa24.16■■□□□ 1.46
CCDC18-206ENST00000448243 TOP2BQ02880 1626 aa24.13■■□□□ 1.45
CCDC18-206ENST00000448243 BIVM-ERCC5R4GMW8 1640 aa24.1■■□□□ 1.45
CCDC18-206ENST00000448243 ADAMTS12P58397 1594 aa24.1■■□□□ 1.45
CCDC18-206ENST00000448243 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
CCDC18-206ENST00000448243 NUP160Q12769 1436 aa24.07■■□□□ 1.44
CCDC18-206ENST00000448243 ERICH3Q5RHP9 1530 aa24.05■■□□□ 1.44
CCDC18-206ENST00000448243 CEP170Q5SW79 1584 aa24.01■■□□□ 1.43
CCDC18-206ENST00000448243 ERCC6L2Q5T890 1561 aa23.95■■□□□ 1.43
CCDC18-206ENST00000448243 SHROOM2Q13796 1616 aa23.93■■□□□ 1.42
CCDC18-206ENST00000448243 PRG4Q92954 1404 aaPredicted RBP23.87■■□□□ 1.41
CCDC18-206ENST00000448243 JPH4Q96JJ6 628 aa23.87■■□□□ 1.41
CCDC18-206ENST00000448243 NPM1P06748 294 aaKnown RBP eCLIP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms