RNA–Protein interactions for RNA: ENST00000447633.1

PSMD1-207, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 2

Gene PSMD1, Length 696 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-207ENST00000447633 NISCHQ9Y2I1 1504 aa17.76■□□□□ 0.43
PSMD1-207ENST00000447633 AEBP2Q6ZN18 517 aaPredicted RBP17.5■□□□□ 0.39
PSMD1-207ENST00000447633 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
PSMD1-207ENST00000447633 ABCC9O60706 1549 aa16.52■□□□□ 0.24
PSMD1-207ENST00000447633 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
PSMD1-207ENST00000447633 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
PSMD1-207ENST00000447633 RB1CC1Q8TDY2 1594 aa15.6■□□□□ 0.09
PSMD1-207ENST00000447633 NACADO15069 1562 aa15.37■□□□□ 0.05
PSMD1-207ENST00000447633 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
PSMD1-207ENST00000447633 UNC13AQ9UPW8 1703 aa15.2■□□□□ 0.02
PSMD1-207ENST00000447633 SENP3Q9H4L4 574 aaPredicted RBP15.18■□□□□ 0.02
PSMD1-207ENST00000447633 DCAF8L2P0C7V8 631 aa15.17■□□□□ 0.02
PSMD1-207ENST00000447633 BICRAQ9NZM4 1560 aa15.07■□□□□ 0
PSMD1-207ENST00000447633 MYO15BQ96JP2 1530 aa15.01□□□□□ -0.01
PSMD1-207ENST00000447633 CECR2Q9BXF3 1484 aa14.95□□□□□ -0.02
PSMD1-207ENST00000447633 SHROOM4Q9ULL8 1493 aa14.94□□□□□ -0.02
PSMD1-207ENST00000447633 CC2D2AQ9P2K1 1620 aa14.92□□□□□ -0.02
PSMD1-207ENST00000447633 PHF23Q9BUL5 403 aaPredicted RBP14.83□□□□□ -0.04
PSMD1-207ENST00000447633 DNAJC5Q9H3Z4 198 aa14.82□□□□□ -0.04
PSMD1-207ENST00000447633 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
PSMD1-207ENST00000447633 SCRIBQ14160 1630 aa14.7□□□□□ -0.06
PSMD1-207ENST00000447633 DCAF1Q9Y4B6 1507 aa14.66□□□□□ -0.06
PSMD1-207ENST00000447633 ZCCHC6Q5VYS8 1495 aaKnown RBP14.64□□□□□ -0.07
PSMD1-207ENST00000447633 CUX2O14529 1486 aa14.45□□□□□ -0.1
PSMD1-207ENST00000447633 ERCC6Q03468 1493 aa14.37□□□□□ -0.11
PSMD1-207ENST00000447633 NCAPD3P42695 1498 aa14.14□□□□□ -0.15
PSMD1-207ENST00000447633 FOXD1Q16676 465 aa14.08□□□□□ -0.16
PSMD1-207ENST00000447633 HMGXB3Q12766 1538 aa14.06□□□□□ -0.16
PSMD1-207ENST00000447633 SMARCA2P51531 1590 aa14.06□□□□□ -0.16
PSMD1-207ENST00000447633 TRIM41Q8WV44 630 aa14.06□□□□□ -0.16
PSMD1-207ENST00000447633 ATAD2BQ9ULI0 1458 aa14.05□□□□□ -0.16
PSMD1-207ENST00000447633 NESP48681 1621 aa14.04□□□□□ -0.16
PSMD1-207ENST00000447633 THOC2Q8NI27 1593 aaKnown RBP14.04□□□□□ -0.16
PSMD1-207ENST00000447633 SMARCA4P51532 1647 aa13.97□□□□□ -0.17
PSMD1-207ENST00000447633 LAMC3Q9Y6N6 1575 aa13.96□□□□□ -0.18
PSMD1-207ENST00000447633 BAZ1BQ9UIG0 1483 aaKnown RBP13.94□□□□□ -0.18
PSMD1-207ENST00000447633 KIF21AQ7Z4S6 1674 aa13.91□□□□□ -0.18
PSMD1-207ENST00000447633 PDS5BQ9NTI5 1447 aa13.89□□□□□ -0.19
PSMD1-207ENST00000447633 BAZ1AQ9NRL2 1556 aaPredicted RBP13.86□□□□□ -0.19
PSMD1-207ENST00000447633 PEG3Q9GZU2 1588 aa13.82□□□□□ -0.2
PSMD1-207ENST00000447633 MRC2Q9UBG0 1479 aa13.79□□□□□ -0.2
PSMD1-207ENST00000447633 POTEDQ86YR6 584 aa13.77□□□□□ -0.21
PSMD1-207ENST00000447633 WDR62O43379 1518 aa13.75□□□□□ -0.21
PSMD1-207ENST00000447633 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.22
PSMD1-207ENST00000447633 OSCARQ8IYS5 282 aa13.68□□□□□ -0.22
PSMD1-207ENST00000447633 CEP164Q9UPV0 1460 aa13.67□□□□□ -0.22
PSMD1-207ENST00000447633 MROH2BQ7Z745 1585 aa13.66□□□□□ -0.22
PSMD1-207ENST00000447633 FANCD2Q9BXW9 1451 aa13.58□□□□□ -0.24
PSMD1-207ENST00000447633 RIMBP3CA6NJZ7 1639 aa13.57□□□□□ -0.24
PSMD1-207ENST00000447633 RIMBP3BA6NNM3 1639 aa13.57□□□□□ -0.24
PSMD1-207ENST00000447633 RIMBP3Q9UFD9 1639 aa13.57□□□□□ -0.24
PSMD1-207ENST00000447633 MSH5O43196 834 aa13.5□□□□□ -0.25
PSMD1-207ENST00000447633 WIZO95785 1651 aa13.5□□□□□ -0.25
PSMD1-207ENST00000447633 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
PSMD1-207ENST00000447633 URB2Q14146 1524 aaKnown RBP13.46□□□□□ -0.25
PSMD1-207ENST00000447633 CFTRP13569 1480 aa13.46□□□□□ -0.25
PSMD1-207ENST00000447633 TRHP20396 242 aaPredicted RBP13.41□□□□□ -0.26
PSMD1-207ENST00000447633 PRDM2Q13029 1718 aa13.39□□□□□ -0.27
PSMD1-207ENST00000447633 IFT140Q96RY7 1462 aa13.39□□□□□ -0.27
PSMD1-207ENST00000447633 CYB5RLQ6IPT4 315 aa13.37□□□□□ -0.27
PSMD1-207ENST00000447633 ZNF608Q9ULD9 1512 aaPredicted RBP13.35□□□□□ -0.27
PSMD1-207ENST00000447633 TOP2AP11388 1531 aaKnown RBP13.34□□□□□ -0.27
PSMD1-207ENST00000447633 EIF4G3O43432 1585 aaKnown RBP13.32□□□□□ -0.28
PSMD1-207ENST00000447633 CHD1O14646 1710 aa13.3□□□□□ -0.28
PSMD1-207ENST00000447633 ARAP1Q96P48 1450 aa13.3□□□□□ -0.28
PSMD1-207ENST00000447633 RSF1Q96T23 1441 aaPredicted RBP13.28□□□□□ -0.28
PSMD1-207ENST00000447633 TOPBP1Q92547 1522 aa13.27□□□□□ -0.29
PSMD1-207ENST00000447633 ABCC8Q09428 1581 aa13.25□□□□□ -0.29
PSMD1-207ENST00000447633 FBLN2P98095 1184 aa13.23□□□□□ -0.29
PSMD1-207ENST00000447633 DNMBPQ6XZF7 1577 aa13.21□□□□□ -0.29
PSMD1-207ENST00000447633 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.3
PSMD1-207ENST00000447633 TARBP1Q13395 1621 aaKnown RBP13.17□□□□□ -0.3
PSMD1-207ENST00000447633 SYNJ1O43426 1573 aa13.13□□□□□ -0.31
PSMD1-207ENST00000447633 CCDC88BA6NC98 1476 aa13.13□□□□□ -0.31
PSMD1-207ENST00000447633 PIAS4Q8N2W9 510 aaPredicted RBP13.11□□□□□ -0.31
PSMD1-207ENST00000447633 CLASP1Q7Z460 1538 aa13.11□□□□□ -0.31
PSMD1-207ENST00000447633 POLA1P09884 1462 aaPredicted RBP13.1□□□□□ -0.31
PSMD1-207ENST00000447633 WDR97A6NE52 1622 aa13.08□□□□□ -0.32
PSMD1-207ENST00000447633 SNAPC4Q5SXM2 1469 aa13.08□□□□□ -0.32
PSMD1-207ENST00000447633 CHMP7Q8WUX9 453 aaPredicted RBP13.06□□□□□ -0.32
PSMD1-207ENST00000447633 MAGI1Q96QZ7 1491 aaPredicted RBP13.05□□□□□ -0.32
PSMD1-207ENST00000447633 RAD54L2Q9Y4B4 1467 aa13.04□□□□□ -0.32
PSMD1-207ENST00000447633 TDRD9Q8NDG6 1382 aaKnown RBP13.03□□□□□ -0.32
PSMD1-207ENST00000447633 SOGA1O94964 1423 aa13.03□□□□□ -0.32
PSMD1-207ENST00000447633 GAPVD1Q14C86 1478 aa13.01□□□□□ -0.33
PSMD1-207ENST00000447633 SYNJ2O15056 1496 aa13□□□□□ -0.33
PSMD1-207ENST00000447633 GRIN2BQ13224 1484 aa12.99□□□□□ -0.33
PSMD1-207ENST00000447633 FGD5Q6ZNL6 1462 aa12.97□□□□□ -0.33
PSMD1-207ENST00000447633 PBRM1Q86U86 1689 aa12.95□□□□□ -0.34
PSMD1-207ENST00000447633 PLPPR3Q6T4P5 718 aa12.91□□□□□ -0.34
PSMD1-207ENST00000447633 CUX1P39880 1505 aa12.88□□□□□ -0.35
PSMD1-207ENST00000447633 KIF13AQ9H1H9 1805 aa12.84□□□□□ -0.35
PSMD1-207ENST00000447633 ERCC6L2Q5T890 1561 aa12.83□□□□□ -0.36
PSMD1-207ENST00000447633 ABCA5Q8WWZ7 1642 aa12.83□□□□□ -0.36
PSMD1-207ENST00000447633 CEP170Q5SW79 1584 aa12.82□□□□□ -0.36
PSMD1-207ENST00000447633 GRIN2AQ12879 1464 aa12.82□□□□□ -0.36
PSMD1-207ENST00000447633 ABCA10Q8WWZ4 1543 aa12.8□□□□□ -0.36
PSMD1-207ENST00000447633 ADAMTS12P58397 1594 aa12.78□□□□□ -0.36
PSMD1-207ENST00000447633 SHROOM2Q13796 1616 aa12.78□□□□□ -0.36
PSMD1-207ENST00000447633 NUP160Q12769 1436 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms