RNA–Protein interactions for RNA: ENST00000447261.6

BCRP3-201, Transcript of breakpoint cluster region pseudogene 3, humanhuman

TSL 2

Gene BCRP3, Length 1,457 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCRP3-201ENST00000447261 NISCHQ9Y2I1 1504 aa38.48■■■■□ 3.75
BCRP3-201ENST00000447261 CCDC180Q9P1Z9 1646 aa34.41■■■■□ 3.1
BCRP3-201ENST00000447261 ABCC9O60706 1549 aa34.26■■■■□ 3.08
BCRP3-201ENST00000447261 RB1CC1Q8TDY2 1594 aa32.67■■■□□ 2.82
BCRP3-201ENST00000447261 DCAF8L2P0C7V8 631 aa32.52■■■□□ 2.8
BCRP3-201ENST00000447261 NACADO15069 1562 aa32.49■■■□□ 2.79
BCRP3-201ENST00000447261 MYO15BQ96JP2 1530 aa32.07■■■□□ 2.72
BCRP3-201ENST00000447261 PABPN1Q86U42 306 aaKnown RBP eCLIP31.97■■■□□ 2.71
BCRP3-201ENST00000447261 UNC13AQ9UPW8 1703 aa31.94■■■□□ 2.7
BCRP3-201ENST00000447261 ZCCHC6Q5VYS8 1495 aaKnown RBP31.94■■■□□ 2.7
BCRP3-201ENST00000447261 DNAJC5BQ9UF47 199 aa31.91■■■□□ 2.7
BCRP3-201ENST00000447261 DCAF1Q9Y4B6 1507 aa31.76■■■□□ 2.67
BCRP3-201ENST00000447261 BICRAQ9NZM4 1560 aa31.69■■■□□ 2.66
BCRP3-201ENST00000447261 SCRIBQ14160 1630 aa31.45■■■□□ 2.63
BCRP3-201ENST00000447261 SHROOM4Q9ULL8 1493 aa31.25■■■□□ 2.59
BCRP3-201ENST00000447261 CC2D2AQ9P2K1 1620 aa30.93■■■□□ 2.54
BCRP3-201ENST00000447261 EIF4G1Q04637 1599 aaKnown RBP30.92■■■□□ 2.54
BCRP3-201ENST00000447261 CECR2Q9BXF3 1484 aa30.82■■■□□ 2.52
BCRP3-201ENST00000447261 NCAPD3P42695 1498 aa29.98■■■□□ 2.39
BCRP3-201ENST00000447261 SMARCA4P51532 1647 aa29.98■■■□□ 2.39
BCRP3-201ENST00000447261 ATAD2BQ9ULI0 1458 aa29.95■■■□□ 2.38
BCRP3-201ENST00000447261 SMARCA2P51531 1590 aa29.88■■■□□ 2.37
BCRP3-201ENST00000447261 BAZ1AQ9NRL2 1556 aaPredicted RBP29.86■■■□□ 2.37
BCRP3-201ENST00000447261 HMGXB3Q12766 1538 aa29.78■■■□□ 2.36
BCRP3-201ENST00000447261 BAZ1BQ9UIG0 1483 aaKnown RBP29.7■■■□□ 2.35
BCRP3-201ENST00000447261 MROH2BQ7Z745 1585 aa29.67■■■□□ 2.34
BCRP3-201ENST00000447261 PEG3Q9GZU2 1588 aa29.64■■■□□ 2.34
BCRP3-201ENST00000447261 ERCC6Q03468 1493 aa29.59■■■□□ 2.33
BCRP3-201ENST00000447261 NESP48681 1621 aa29.49■■■□□ 2.31
BCRP3-201ENST00000447261 CUX2O14529 1486 aa29.38■■■□□ 2.29
BCRP3-201ENST00000447261 WIZO95785 1651 aa29.35■■■□□ 2.29
BCRP3-201ENST00000447261 LAMC3Q9Y6N6 1575 aa29.28■■■□□ 2.28
BCRP3-201ENST00000447261 RSF1Q96T23 1441 aaPredicted RBP29.13■■■□□ 2.25
BCRP3-201ENST00000447261 PDS5BQ9NTI5 1447 aa29.13■■■□□ 2.25
BCRP3-201ENST00000447261 KIF21AQ7Z4S6 1674 aa29.12■■■□□ 2.25
BCRP3-201ENST00000447261 DNAJC5Q9H3Z4 198 aa29.11■■■□□ 2.25
BCRP3-201ENST00000447261 CADPSQ9ULU8 1353 aa29.11■■■□□ 2.25
BCRP3-201ENST00000447261 THOC2Q8NI27 1593 aaKnown RBP29.1■■■□□ 2.25
BCRP3-201ENST00000447261 TOP2AP11388 1531 aaKnown RBP28.97■■■□□ 2.23
BCRP3-201ENST00000447261 MRC2Q9UBG0 1479 aa28.86■■■□□ 2.21
BCRP3-201ENST00000447261 CFTRP13569 1480 aa28.81■■■□□ 2.2
BCRP3-201ENST00000447261 CEP164Q9UPV0 1460 aa28.8■■■□□ 2.2
BCRP3-201ENST00000447261 FANCD2Q9BXW9 1451 aa28.8■■■□□ 2.2
BCRP3-201ENST00000447261 WDR62O43379 1518 aa28.76■■■□□ 2.2
BCRP3-201ENST00000447261 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
BCRP3-201ENST00000447261 PRDM2Q13029 1718 aa28.55■■■□□ 2.16
BCRP3-201ENST00000447261 URB2Q14146 1524 aaKnown RBP28.53■■■□□ 2.16
BCRP3-201ENST00000447261 TOPBP1Q92547 1522 aa28.26■■■□□ 2.12
BCRP3-201ENST00000447261 IFT140Q96RY7 1462 aa28.21■■■□□ 2.11
BCRP3-201ENST00000447261 ABCC8Q09428 1581 aa28.21■■■□□ 2.11
BCRP3-201ENST00000447261 DNMBPQ6XZF7 1577 aa28.18■■■□□ 2.1
BCRP3-201ENST00000447261 ZNF608Q9ULD9 1512 aaPredicted RBP28.16■■■□□ 2.1
BCRP3-201ENST00000447261 SUPT5HO00267 1087 aaKnown RBP28.13■■■□□ 2.09
BCRP3-201ENST00000447261 OSCARQ8IYS5 282 aa28.13■■■□□ 2.09
BCRP3-201ENST00000447261 TRIM41Q8WV44 630 aa28.03■■■□□ 2.08
BCRP3-201ENST00000447261 EIF4G3O43432 1585 aaKnown RBP28■■■□□ 2.07
BCRP3-201ENST00000447261 POLA1P09884 1462 aaPredicted RBP27.99■■■□□ 2.07
BCRP3-201ENST00000447261 TARBP1Q13395 1621 aaKnown RBP27.98■■■□□ 2.07
BCRP3-201ENST00000447261 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.06
BCRP3-201ENST00000447261 RAD54L2Q9Y4B4 1467 aa27.92■■■□□ 2.06
BCRP3-201ENST00000447261 SOGA1O94964 1423 aa27.89■■■□□ 2.06
BCRP3-201ENST00000447261 CUX1P39880 1505 aa27.87■■■□□ 2.05
BCRP3-201ENST00000447261 FGD5Q6ZNL6 1462 aa27.86■■■□□ 2.05
BCRP3-201ENST00000447261 TDRD9Q8NDG6 1382 aaKnown RBP27.81■■■□□ 2.04
BCRP3-201ENST00000447261 FBLN2P98095 1184 aa27.78■■■□□ 2.04
BCRP3-201ENST00000447261 CHD1O14646 1710 aa27.77■■■□□ 2.04
BCRP3-201ENST00000447261 RIMBP3CA6NJZ7 1639 aa27.72■■■□□ 2.03
BCRP3-201ENST00000447261 RIMBP3BA6NNM3 1639 aa27.72■■■□□ 2.03
BCRP3-201ENST00000447261 RIMBP3Q9UFD9 1639 aa27.72■■■□□ 2.03
BCRP3-201ENST00000447261 WDR97A6NE52 1622 aa27.69■■■□□ 2.02
BCRP3-201ENST00000447261 SNAPC4Q5SXM2 1469 aa27.67■■■□□ 2.02
BCRP3-201ENST00000447261 ARHGEF11O15085 1522 aa27.65■■■□□ 2.02
BCRP3-201ENST00000447261 GRIN2BQ13224 1484 aa27.61■■■□□ 2.01
BCRP3-201ENST00000447261 CHMP7Q8WUX9 453 aaPredicted RBP27.58■■■□□ 2.01
BCRP3-201ENST00000447261 MAGI1Q96QZ7 1491 aaPredicted RBP27.57■■■□□ 2
BCRP3-201ENST00000447261 GAPVD1Q14C86 1478 aa27.55■■■□□ 2
BCRP3-201ENST00000447261 ABCA10Q8WWZ4 1543 aa27.53■■■□□ 2
BCRP3-201ENST00000447261 PBRM1Q86U86 1689 aa27.52■■■□□ 2
BCRP3-201ENST00000447261 WRNQ14191 1432 aaPredicted RBP eCLIP27.5■■□□□ 1.99
BCRP3-201ENST00000447261 CYB5RLQ6IPT4 315 aa27.49■■□□□ 1.99
BCRP3-201ENST00000447261 SYNJ2O15056 1496 aa27.48■■□□□ 1.99
BCRP3-201ENST00000447261 TOP2BQ02880 1626 aa27.48■■□□□ 1.99
BCRP3-201ENST00000447261 ABCA5Q8WWZ7 1642 aa27.47■■□□□ 1.99
BCRP3-201ENST00000447261 BIVM-ERCC5R4GMW8 1640 aa27.47■■□□□ 1.99
BCRP3-201ENST00000447261 SYNJ1O43426 1573 aa27.47■■□□□ 1.99
BCRP3-201ENST00000447261 CLASP1Q7Z460 1538 aa27.41■■□□□ 1.98
BCRP3-201ENST00000447261 ARAP1Q96P48 1450 aa27.39■■□□□ 1.98
BCRP3-201ENST00000447261 ADAMTS12P58397 1594 aa27.26■■□□□ 1.95
BCRP3-201ENST00000447261 GRIN2AQ12879 1464 aa27.25■■□□□ 1.95
BCRP3-201ENST00000447261 FHAD1B1AJZ9 1412 aa27.2■■□□□ 1.94
BCRP3-201ENST00000447261 ERICH3Q5RHP9 1530 aa27.2■■□□□ 1.94
BCRP3-201ENST00000447261 CEP170Q5SW79 1584 aa27.14■■□□□ 1.94
BCRP3-201ENST00000447261 TRHP20396 242 aaPredicted RBP27.14■■□□□ 1.94
BCRP3-201ENST00000447261 NUP160Q12769 1436 aa27.13■■□□□ 1.93
BCRP3-201ENST00000447261 ERCC6L2Q5T890 1561 aa27.04■■□□□ 1.92
BCRP3-201ENST00000447261 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
BCRP3-201ENST00000447261 KIF27Q86VH2 1401 aa26.97■■□□□ 1.91
BCRP3-201ENST00000447261 SHROOM2Q13796 1616 aa26.97■■□□□ 1.91
BCRP3-201ENST00000447261 IGF1RP08069 1367 aa26.92■■□□□ 1.9
BCRP3-201ENST00000447261 JPH4Q96JJ6 628 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms