RNA–Protein interactions for RNA: ENST00000446616.1

CHRND-204, Transcript of cholinergic receptor nicotinic delta subunit, humanhuman

TSL 3

Gene CHRND, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRND-204ENST00000446616 NISCHQ9Y2I1 1504 aa47.17■■■■■ 5.14
CHRND-204ENST00000446616 CCDC180Q9P1Z9 1646 aa41.52■■■■■ 4.24
CHRND-204ENST00000446616 ABCC9O60706 1549 aa39.82■■■■□ 3.97
CHRND-204ENST00000446616 ZCCHC6Q5VYS8 1495 aaKnown RBP39.54■■■■□ 3.92
CHRND-204ENST00000446616 DCAF8L2P0C7V8 631 aa39.12■■■■□ 3.85
CHRND-204ENST00000446616 DCAF1Q9Y4B6 1507 aa39.08■■■■□ 3.85
CHRND-204ENST00000446616 MYO15BQ96JP2 1530 aa38.92■■■■□ 3.82
CHRND-204ENST00000446616 NACADO15069 1562 aa38.87■■■■□ 3.81
CHRND-204ENST00000446616 RB1CC1Q8TDY2 1594 aa38.7■■■■□ 3.79
CHRND-204ENST00000446616 SCRIBQ14160 1630 aa37.98■■■■□ 3.67
CHRND-204ENST00000446616 SHROOM4Q9ULL8 1493 aa37.98■■■■□ 3.67
CHRND-204ENST00000446616 UNC13AQ9UPW8 1703 aa37.71■■■■□ 3.63
CHRND-204ENST00000446616 BICRAQ9NZM4 1560 aa37.44■■■■□ 3.58
CHRND-204ENST00000446616 PABPN1Q86U42 306 aaKnown RBP eCLIP37.38■■■■□ 3.57
CHRND-204ENST00000446616 CECR2Q9BXF3 1484 aa36.63■■■■□ 3.45
CHRND-204ENST00000446616 BAZ1AQ9NRL2 1556 aaPredicted RBP36.52■■■■□ 3.44
CHRND-204ENST00000446616 EIF4G1Q04637 1599 aaKnown RBP36.42■■■■□ 3.42
CHRND-204ENST00000446616 SMARCA4P51532 1647 aa36.4■■■■□ 3.42
CHRND-204ENST00000446616 MROH2BQ7Z745 1585 aa36.38■■■■□ 3.42
CHRND-204ENST00000446616 RSF1Q96T23 1441 aaPredicted RBP36.36■■■■□ 3.41
CHRND-204ENST00000446616 SUPT5HO00267 1087 aaKnown RBP36.28■■■■□ 3.4
CHRND-204ENST00000446616 WIZO95785 1651 aa36.07■■■■□ 3.37
CHRND-204ENST00000446616 PEG3Q9GZU2 1588 aa36.04■■■■□ 3.36
CHRND-204ENST00000446616 CC2D2AQ9P2K1 1620 aa36.03■■■■□ 3.36
CHRND-204ENST00000446616 SMARCA2P51531 1590 aa36.02■■■■□ 3.36
CHRND-204ENST00000446616 ATAD2BQ9ULI0 1458 aa36■■■■□ 3.35
CHRND-204ENST00000446616 NCAPD3P42695 1498 aa35.86■■■■□ 3.33
CHRND-204ENST00000446616 BAZ1BQ9UIG0 1483 aaKnown RBP35.78■■■■□ 3.32
CHRND-204ENST00000446616 HMGXB3Q12766 1538 aa35.76■■■■□ 3.31
CHRND-204ENST00000446616 TOP2AP11388 1531 aaKnown RBP35.74■■■■□ 3.31
CHRND-204ENST00000446616 DNAJC5BQ9UF47 199 aa35.72■■■■□ 3.31
CHRND-204ENST00000446616 CCDC88BA6NC98 1476 aa35.3■■■■□ 3.24
CHRND-204ENST00000446616 CADPSQ9ULU8 1353 aa34.88■■■■□ 3.17
CHRND-204ENST00000446616 CFTRP13569 1480 aa34.84■■■■□ 3.17
CHRND-204ENST00000446616 LAMC3Q9Y6N6 1575 aa34.77■■■■□ 3.16
CHRND-204ENST00000446616 NESP48681 1621 aa34.69■■■■□ 3.14
CHRND-204ENST00000446616 PRDM2Q13029 1718 aa34.63■■■■□ 3.13
CHRND-204ENST00000446616 PDS5BQ9NTI5 1447 aa34.54■■■■□ 3.12
CHRND-204ENST00000446616 CHIC1Q5VXU3 224 aa34.51■■■■□ 3.12
CHRND-204ENST00000446616 FANCD2Q9BXW9 1451 aa34.47■■■■□ 3.11
CHRND-204ENST00000446616 ABCC8Q09428 1581 aa34.38■■■■□ 3.09
CHRND-204ENST00000446616 CEP164Q9UPV0 1460 aa34.35■■■■□ 3.09
CHRND-204ENST00000446616 ERCC6Q03468 1493 aa34.3■■■■□ 3.08
CHRND-204ENST00000446616 KIF21AQ7Z4S6 1674 aa34.28■■■■□ 3.08
CHRND-204ENST00000446616 WRNQ14191 1432 aaPredicted RBP eCLIP34.26■■■■□ 3.07
CHRND-204ENST00000446616 TRIM41Q8WV44 630 aa34.22■■■■□ 3.07
CHRND-204ENST00000446616 SYNJ1O43426 1573 aa34.14■■■■□ 3.06
CHRND-204ENST00000446616 MRC2Q9UBG0 1479 aa34.11■■■■□ 3.05
CHRND-204ENST00000446616 TOP2BQ02880 1626 aa34.08■■■■□ 3.05
CHRND-204ENST00000446616 CUX1P39880 1505 aa34.08■■■■□ 3.05
CHRND-204ENST00000446616 BIVM-ERCC5R4GMW8 1640 aa34.08■■■■□ 3.05
CHRND-204ENST00000446616 DNMBPQ6XZF7 1577 aa34.04■■■■□ 3.04
CHRND-204ENST00000446616 URB2Q14146 1524 aaKnown RBP34.04■■■■□ 3.04
CHRND-204ENST00000446616 TOPBP1Q92547 1522 aa34■■■■□ 3.03
CHRND-204ENST00000446616 THOC2Q8NI27 1593 aaKnown RBP33.97■■■■□ 3.03
CHRND-204ENST00000446616 WDR62O43379 1518 aa33.95■■■■□ 3.03
CHRND-204ENST00000446616 FGD5Q6ZNL6 1462 aa33.83■■■■□ 3.01
CHRND-204ENST00000446616 POLA1P09884 1462 aaPredicted RBP33.78■■■■□ 3
CHRND-204ENST00000446616 SOGA1O94964 1423 aa33.68■■■□□ 2.98
CHRND-204ENST00000446616 CUX2O14529 1486 aa33.63■■■□□ 2.97
CHRND-204ENST00000446616 RAD54L2Q9Y4B4 1467 aa33.61■■■□□ 2.97
CHRND-204ENST00000446616 IFT140Q96RY7 1462 aa33.6■■■□□ 2.97
CHRND-204ENST00000446616 EEA1Q15075 1411 aa33.55■■■□□ 2.96
CHRND-204ENST00000446616 ABCA10Q8WWZ4 1543 aa33.54■■■□□ 2.96
CHRND-204ENST00000446616 TARBP1Q13395 1621 aaKnown RBP33.53■■■□□ 2.96
CHRND-204ENST00000446616 RUSC2Q8N2Y8 1516 aa33.5■■■□□ 2.95
CHRND-204ENST00000446616 FAM9AQ8IZU1 332 aaPredicted RBP33.49■■■□□ 2.95
CHRND-204ENST00000446616 WDR97A6NE52 1622 aa33.47■■■□□ 2.95
CHRND-204ENST00000446616 KIF27Q86VH2 1401 aa33.46■■■□□ 2.95
CHRND-204ENST00000446616 TDRD9Q8NDG6 1382 aaKnown RBP33.37■■■□□ 2.93
CHRND-204ENST00000446616 CSRNP3Q8WYN3 585 aa33.33■■■□□ 2.93
CHRND-204ENST00000446616 ZNF608Q9ULD9 1512 aaPredicted RBP33.33■■■□□ 2.93
CHRND-204ENST00000446616 ABCA5Q8WWZ7 1642 aa33.3■■■□□ 2.92
CHRND-204ENST00000446616 GAPVD1Q14C86 1478 aa33.3■■■□□ 2.92
CHRND-204ENST00000446616 AQRO60306 1485 aaKnown RBP eCLIP33.27■■■□□ 2.92
CHRND-204ENST00000446616 EIF4G3O43432 1585 aaKnown RBP33.24■■■□□ 2.91
CHRND-204ENST00000446616 GRIN2BQ13224 1484 aa33.18■■■□□ 2.9
CHRND-204ENST00000446616 IGF1RP08069 1367 aa33.17■■■□□ 2.9
CHRND-204ENST00000446616 ERICH3Q5RHP9 1530 aa33.16■■■□□ 2.9
CHRND-204ENST00000446616 KIF21BO75037 1637 aa33.14■■■□□ 2.9
CHRND-204ENST00000446616 PBRM1Q86U86 1689 aa33.1■■■□□ 2.89
CHRND-204ENST00000446616 LOC105371045A0A1W2PR82 267 aa33.1■■■□□ 2.89
CHRND-204ENST00000446616 PRXQ9BXM0 1461 aa33.09■■■□□ 2.89
CHRND-204ENST00000446616 CUL7Q14999 1698 aa33.06■■■□□ 2.88
CHRND-204ENST00000446616 GOLGA3Q08378 1498 aa33.03■■■□□ 2.88
CHRND-204ENST00000446616 CARMIL1Q5VZK9 1371 aa33.01■■■□□ 2.88
CHRND-204ENST00000446616 SNAPC4Q5SXM2 1469 aa32.99■■■□□ 2.87
CHRND-204ENST00000446616 MAGI1Q96QZ7 1491 aaPredicted RBP32.99■■■□□ 2.87
CHRND-204ENST00000446616 EHMT2Q96KQ7 1210 aa32.98■■■□□ 2.87
CHRND-204ENST00000446616 RAPGEF2Q9Y4G8 1499 aa32.98■■■□□ 2.87
CHRND-204ENST00000446616 FHAD1B1AJZ9 1412 aa32.96■■■□□ 2.87
CHRND-204ENST00000446616 ADAMTS12P58397 1594 aa32.93■■■□□ 2.86
CHRND-204ENST00000446616 SYNJ2O15056 1496 aa32.85■■■□□ 2.85
CHRND-204ENST00000446616 UBTFP17480 764 aaKnown RBP32.83■■■□□ 2.85
CHRND-204ENST00000446616 TNIKQ9UKE5 1360 aa32.81■■■□□ 2.84
CHRND-204ENST00000446616 CHMP7Q8WUX9 453 aaPredicted RBP32.81■■■□□ 2.84
CHRND-204ENST00000446616 FBLN2P98095 1184 aa32.76■■■□□ 2.84
CHRND-204ENST00000446616 GRIN2AQ12879 1464 aa32.74■■■□□ 2.83
CHRND-204ENST00000446616 CHD1O14646 1710 aa32.61■■■□□ 2.81
CHRND-204ENST00000446616 CTTNBP2Q8WZ74 1663 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms