RNA–Protein interactions for RNA: ENST00000446152.6

KDM2B-203, Transcript of lysine demethylase 2B, humanhuman

TSL 5

Gene KDM2B, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-203ENST00000446152 NISCHQ9Y2I1 1504 aa31.63■■■□□ 2.65
KDM2B-203ENST00000446152 CCDC180Q9P1Z9 1646 aa28.57■■■□□ 2.16
KDM2B-203ENST00000446152 ABCC9O60706 1549 aa28.44■■■□□ 2.14
KDM2B-203ENST00000446152 RB1CC1Q8TDY2 1594 aa27.13■■□□□ 1.93
KDM2B-203ENST00000446152 NACADO15069 1562 aa26.91■■□□□ 1.9
KDM2B-203ENST00000446152 UNC13AQ9UPW8 1703 aa26.68■■□□□ 1.86
KDM2B-203ENST00000446152 DNAJC5BQ9UF47 199 aa26.63■■□□□ 1.85
KDM2B-203ENST00000446152 MYO15BQ96JP2 1530 aa26.53■■□□□ 1.84
KDM2B-203ENST00000446152 DCAF8L2P0C7V8 631 aa26.49■■□□□ 1.83
KDM2B-203ENST00000446152 ZCCHC6Q5VYS8 1495 aaKnown RBP26.47■■□□□ 1.83
KDM2B-203ENST00000446152 BICRAQ9NZM4 1560 aa26.36■■□□□ 1.81
KDM2B-203ENST00000446152 PABPN1Q86U42 306 aaKnown RBP eCLIP26.35■■□□□ 1.81
KDM2B-203ENST00000446152 DCAF1Q9Y4B6 1507 aa26.17■■□□□ 1.78
KDM2B-203ENST00000446152 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
KDM2B-203ENST00000446152 SCRIBQ14160 1630 aa25.94■■□□□ 1.74
KDM2B-203ENST00000446152 CC2D2AQ9P2K1 1620 aa25.77■■□□□ 1.72
KDM2B-203ENST00000446152 EIF4G1Q04637 1599 aaKnown RBP25.71■■□□□ 1.71
KDM2B-203ENST00000446152 CECR2Q9BXF3 1484 aa25.63■■□□□ 1.69
KDM2B-203ENST00000446152 NCAPD3P42695 1498 aa24.77■■□□□ 1.56
KDM2B-203ENST00000446152 SMARCA4P51532 1647 aa24.76■■□□□ 1.55
KDM2B-203ENST00000446152 ATAD2BQ9ULI0 1458 aa24.71■■□□□ 1.55
KDM2B-203ENST00000446152 HMGXB3Q12766 1538 aa24.69■■□□□ 1.54
KDM2B-203ENST00000446152 SMARCA2P51531 1590 aa24.68■■□□□ 1.54
KDM2B-203ENST00000446152 BAZ1AQ9NRL2 1556 aaPredicted RBP24.59■■□□□ 1.53
KDM2B-203ENST00000446152 CUX2O14529 1486 aa24.59■■□□□ 1.53
KDM2B-203ENST00000446152 ERCC6Q03468 1493 aa24.56■■□□□ 1.52
KDM2B-203ENST00000446152 PEG3Q9GZU2 1588 aa24.53■■□□□ 1.52
KDM2B-203ENST00000446152 DNAJC5Q9H3Z4 198 aa24.5■■□□□ 1.51
KDM2B-203ENST00000446152 BAZ1BQ9UIG0 1483 aaKnown RBP24.48■■□□□ 1.51
KDM2B-203ENST00000446152 NESP48681 1621 aa24.44■■□□□ 1.5
KDM2B-203ENST00000446152 SUPT5HO00267 1087 aaKnown RBP24.43■■□□□ 1.5
KDM2B-203ENST00000446152 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
KDM2B-203ENST00000446152 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
KDM2B-203ENST00000446152 THOC2Q8NI27 1593 aaKnown RBP24.33■■□□□ 1.49
KDM2B-203ENST00000446152 LAMC3Q9Y6N6 1575 aa24.32■■□□□ 1.48
KDM2B-203ENST00000446152 KIF21AQ7Z4S6 1674 aa24.27■■□□□ 1.48
KDM2B-203ENST00000446152 WIZO95785 1651 aa24.16■■□□□ 1.46
KDM2B-203ENST00000446152 PDS5BQ9NTI5 1447 aa24.07■■□□□ 1.44
KDM2B-203ENST00000446152 CADPSQ9ULU8 1353 aa23.98■■□□□ 1.43
KDM2B-203ENST00000446152 WDR62O43379 1518 aa23.93■■□□□ 1.42
KDM2B-203ENST00000446152 MRC2Q9UBG0 1479 aa23.93■■□□□ 1.42
KDM2B-203ENST00000446152 TOP2AP11388 1531 aaKnown RBP23.91■■□□□ 1.42
KDM2B-203ENST00000446152 CEP164Q9UPV0 1460 aa23.82■■□□□ 1.4
KDM2B-203ENST00000446152 FANCD2Q9BXW9 1451 aa23.77■■□□□ 1.4
KDM2B-203ENST00000446152 CFTRP13569 1480 aa23.76■■□□□ 1.39
KDM2B-203ENST00000446152 PRDM2Q13029 1718 aa23.75■■□□□ 1.39
KDM2B-203ENST00000446152 CCDC88BA6NC98 1476 aa23.65■■□□□ 1.38
KDM2B-203ENST00000446152 URB2Q14146 1524 aaKnown RBP23.6■■□□□ 1.37
KDM2B-203ENST00000446152 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
KDM2B-203ENST00000446152 TOPBP1Q92547 1522 aa23.33■■□□□ 1.33
KDM2B-203ENST00000446152 IFT140Q96RY7 1462 aa23.33■■□□□ 1.33
KDM2B-203ENST00000446152 ZNF608Q9ULD9 1512 aaPredicted RBP23.3■■□□□ 1.32
KDM2B-203ENST00000446152 OSCARQ8IYS5 282 aa23.28■■□□□ 1.32
KDM2B-203ENST00000446152 EIF4G3O43432 1585 aaKnown RBP23.28■■□□□ 1.32
KDM2B-203ENST00000446152 DNMBPQ6XZF7 1577 aa23.28■■□□□ 1.32
KDM2B-203ENST00000446152 CHIC1Q5VXU3 224 aa23.27■■□□□ 1.32
KDM2B-203ENST00000446152 ABCC8Q09428 1581 aa23.25■■□□□ 1.31
KDM2B-203ENST00000446152 RIMBP3CA6NJZ7 1639 aa23.21■■□□□ 1.31
KDM2B-203ENST00000446152 RIMBP3BA6NNM3 1639 aa23.21■■□□□ 1.31
KDM2B-203ENST00000446152 RIMBP3Q9UFD9 1639 aa23.21■■□□□ 1.31
KDM2B-203ENST00000446152 TARBP1Q13395 1621 aaKnown RBP23.2■■□□□ 1.3
KDM2B-203ENST00000446152 CHD1O14646 1710 aa23.16■■□□□ 1.3
KDM2B-203ENST00000446152 POLA1P09884 1462 aaPredicted RBP23.09■■□□□ 1.29
KDM2B-203ENST00000446152 ARHGEF11O15085 1522 aa23.09■■□□□ 1.29
KDM2B-203ENST00000446152 AQRO60306 1485 aaKnown RBP eCLIP23.03■■□□□ 1.28
KDM2B-203ENST00000446152 WDR97A6NE52 1622 aa22.99■■□□□ 1.27
KDM2B-203ENST00000446152 RAD54L2Q9Y4B4 1467 aa22.96■■□□□ 1.27
KDM2B-203ENST00000446152 WRNQ14191 1432 aaPredicted RBP eCLIP22.96■■□□□ 1.27
KDM2B-203ENST00000446152 FGD5Q6ZNL6 1462 aa22.93■■□□□ 1.26
KDM2B-203ENST00000446152 CUX1P39880 1505 aa22.91■■□□□ 1.26
KDM2B-203ENST00000446152 SOGA1O94964 1423 aa22.89■■□□□ 1.25
KDM2B-203ENST00000446152 SYNJ1O43426 1573 aa22.87■■□□□ 1.25
KDM2B-203ENST00000446152 SNAPC4Q5SXM2 1469 aa22.86■■□□□ 1.25
KDM2B-203ENST00000446152 PBRM1Q86U86 1689 aa22.85■■□□□ 1.25
KDM2B-203ENST00000446152 ARAP1Q96P48 1450 aa22.84■■□□□ 1.25
KDM2B-203ENST00000446152 TDRD9Q8NDG6 1382 aaKnown RBP22.84■■□□□ 1.25
KDM2B-203ENST00000446152 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
KDM2B-203ENST00000446152 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
KDM2B-203ENST00000446152 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
KDM2B-203ENST00000446152 MAGI1Q96QZ7 1491 aaPredicted RBP22.8■■□□□ 1.24
KDM2B-203ENST00000446152 FBLN2P98095 1184 aa22.78■■□□□ 1.24
KDM2B-203ENST00000446152 GRIN2BQ13224 1484 aa22.76■■□□□ 1.23
KDM2B-203ENST00000446152 ABCA5Q8WWZ7 1642 aa22.74■■□□□ 1.23
KDM2B-203ENST00000446152 CYB5RLQ6IPT4 315 aa22.74■■□□□ 1.23
KDM2B-203ENST00000446152 SYNJ2O15056 1496 aa22.71■■□□□ 1.23
KDM2B-203ENST00000446152 GAPVD1Q14C86 1478 aa22.67■■□□□ 1.22
KDM2B-203ENST00000446152 ABCA10Q8WWZ4 1543 aa22.67■■□□□ 1.22
KDM2B-203ENST00000446152 CHMP7Q8WUX9 453 aaPredicted RBP22.62■■□□□ 1.21
KDM2B-203ENST00000446152 ADAMTS12P58397 1594 aa22.56■■□□□ 1.2
KDM2B-203ENST00000446152 FAM9AQ8IZU1 332 aaPredicted RBP22.55■■□□□ 1.2
KDM2B-203ENST00000446152 EEA1Q15075 1411 aa22.52■■□□□ 1.2
KDM2B-203ENST00000446152 TRHP20396 242 aaPredicted RBP22.5■■□□□ 1.19
KDM2B-203ENST00000446152 GRIN2AQ12879 1464 aa22.5■■□□□ 1.19
KDM2B-203ENST00000446152 RUSC2Q8N2Y8 1516 aa22.49■■□□□ 1.19
KDM2B-203ENST00000446152 CEP170Q5SW79 1584 aa22.47■■□□□ 1.19
KDM2B-203ENST00000446152 ERCC6L2Q5T890 1561 aa22.43■■□□□ 1.18
KDM2B-203ENST00000446152 SHROOM2Q13796 1616 aa22.42■■□□□ 1.18
KDM2B-203ENST00000446152 NUP160Q12769 1436 aa22.42■■□□□ 1.18
KDM2B-203ENST00000446152 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
KDM2B-203ENST00000446152 KIF27Q86VH2 1401 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms