RNA–Protein interactions for RNA: ENST00000446026.1

SMIM12-204, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-204ENST00000446026 NISCHQ9Y2I1 1504 aa20.21■□□□□ 0.83
SMIM12-204ENST00000446026 CCDC180Q9P1Z9 1646 aa18.34■□□□□ 0.53
SMIM12-204ENST00000446026 ABCC9O60706 1549 aa17.47■□□□□ 0.39
SMIM12-204ENST00000446026 MYO15BQ96JP2 1530 aa17.15■□□□□ 0.34
SMIM12-204ENST00000446026 NACADO15069 1562 aa17.12■□□□□ 0.33
SMIM12-204ENST00000446026 RB1CC1Q8TDY2 1594 aa17.12■□□□□ 0.33
SMIM12-204ENST00000446026 DCAF1Q9Y4B6 1507 aa16.98■□□□□ 0.31
SMIM12-204ENST00000446026 ZCCHC6Q5VYS8 1495 aaKnown RBP16.87■□□□□ 0.29
SMIM12-204ENST00000446026 UNC13AQ9UPW8 1703 aa16.79■□□□□ 0.28
SMIM12-204ENST00000446026 SHROOM4Q9ULL8 1493 aa16.7■□□□□ 0.26
SMIM12-204ENST00000446026 BICRAQ9NZM4 1560 aa16.55■□□□□ 0.24
SMIM12-204ENST00000446026 SCRIBQ14160 1630 aa16.3■□□□□ 0.2
SMIM12-204ENST00000446026 DCAF8L2P0C7V8 631 aa16.23■□□□□ 0.19
SMIM12-204ENST00000446026 EIF4G1Q04637 1599 aaKnown RBP16.09■□□□□ 0.17
SMIM12-204ENST00000446026 PABPN1Q86U42 306 aaKnown RBP eCLIP16.09■□□□□ 0.17
SMIM12-204ENST00000446026 CC2D2AQ9P2K1 1620 aa16.02■□□□□ 0.16
SMIM12-204ENST00000446026 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
SMIM12-204ENST00000446026 CECR2Q9BXF3 1484 aa15.83■□□□□ 0.12
SMIM12-204ENST00000446026 PEG3Q9GZU2 1588 aa15.77■□□□□ 0.12
SMIM12-204ENST00000446026 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
SMIM12-204ENST00000446026 HMGXB3Q12766 1538 aa15.74■□□□□ 0.11
SMIM12-204ENST00000446026 BAZ1AQ9NRL2 1556 aaPredicted RBP15.73■□□□□ 0.11
SMIM12-204ENST00000446026 SMARCA2P51531 1590 aa15.72■□□□□ 0.11
SMIM12-204ENST00000446026 NCAPD3P42695 1498 aa15.7■□□□□ 0.1
SMIM12-204ENST00000446026 ATAD2BQ9ULI0 1458 aa15.6■□□□□ 0.09
SMIM12-204ENST00000446026 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
SMIM12-204ENST00000446026 BAZ1BQ9UIG0 1483 aaKnown RBP15.45■□□□□ 0.06
SMIM12-204ENST00000446026 LAMC3Q9Y6N6 1575 aa15.39■□□□□ 0.05
SMIM12-204ENST00000446026 WIZO95785 1651 aa15.31■□□□□ 0.04
SMIM12-204ENST00000446026 CUX2O14529 1486 aa15.3■□□□□ 0.04
SMIM12-204ENST00000446026 PRDM2Q13029 1718 aa15.3■□□□□ 0.04
SMIM12-204ENST00000446026 TOP2AP11388 1531 aaKnown RBP15.29■□□□□ 0.04
SMIM12-204ENST00000446026 THOC2Q8NI27 1593 aaKnown RBP15.22■□□□□ 0.03
SMIM12-204ENST00000446026 SUPT5HO00267 1087 aaKnown RBP15.22■□□□□ 0.03
SMIM12-204ENST00000446026 RSF1Q96T23 1441 aaPredicted RBP15.22■□□□□ 0.03
SMIM12-204ENST00000446026 KIF21AQ7Z4S6 1674 aa15.17■□□□□ 0.02
SMIM12-204ENST00000446026 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
SMIM12-204ENST00000446026 PDS5BQ9NTI5 1447 aa15.12■□□□□ 0.01
SMIM12-204ENST00000446026 CADPSQ9ULU8 1353 aa15.1■□□□□ 0.01
SMIM12-204ENST00000446026 NESP48681 1621 aa15.09■□□□□ 0.01
SMIM12-204ENST00000446026 CFTRP13569 1480 aa15.08■□□□□ 0.01
SMIM12-204ENST00000446026 WDR62O43379 1518 aa15.08■□□□□ 0
SMIM12-204ENST00000446026 MRC2Q9UBG0 1479 aa15.02■□□□□ -0
SMIM12-204ENST00000446026 CEP164Q9UPV0 1460 aa14.97□□□□□ -0.01
SMIM12-204ENST00000446026 FANCD2Q9BXW9 1451 aa14.93□□□□□ -0.02
SMIM12-204ENST00000446026 CCDC88BA6NC98 1476 aa14.93□□□□□ -0.02
SMIM12-204ENST00000446026 ABCC8Q09428 1581 aa14.88□□□□□ -0.03
SMIM12-204ENST00000446026 WDR97A6NE52 1622 aa14.84□□□□□ -0.03
SMIM12-204ENST00000446026 DNMBPQ6XZF7 1577 aa14.81□□□□□ -0.04
SMIM12-204ENST00000446026 URB2Q14146 1524 aaKnown RBP14.81□□□□□ -0.04
SMIM12-204ENST00000446026 HRCP23327 699 aa14.74□□□□□ -0.05
SMIM12-204ENST00000446026 CHIC1Q5VXU3 224 aa14.74□□□□□ -0.05
SMIM12-204ENST00000446026 IFT140Q96RY7 1462 aa14.73□□□□□ -0.05
SMIM12-204ENST00000446026 TOPBP1Q92547 1522 aa14.72□□□□□ -0.05
SMIM12-204ENST00000446026 PELP1Q8IZL8 1130 aaKnown RBP14.71□□□□□ -0.05
SMIM12-204ENST00000446026 TARBP1Q13395 1621 aaKnown RBP14.69□□□□□ -0.06
SMIM12-204ENST00000446026 DNAJC5Q9H3Z4 198 aa14.66□□□□□ -0.06
SMIM12-204ENST00000446026 BIVM-ERCC5R4GMW8 1640 aa14.61□□□□□ -0.07
SMIM12-204ENST00000446026 EIF4G3O43432 1585 aaKnown RBP14.61□□□□□ -0.07
SMIM12-204ENST00000446026 PCGF6Q9BYE7 350 aa14.56□□□□□ -0.08
SMIM12-204ENST00000446026 POLA1P09884 1462 aaPredicted RBP14.56□□□□□ -0.08
SMIM12-204ENST00000446026 CUX1P39880 1505 aa14.55□□□□□ -0.08
SMIM12-204ENST00000446026 PPARGC1BQ86YN6 1023 aaKnown RBP14.52□□□□□ -0.08
SMIM12-204ENST00000446026 TOP2BQ02880 1626 aa14.52□□□□□ -0.08
SMIM12-204ENST00000446026 PBRM1Q86U86 1689 aa14.5□□□□□ -0.09
SMIM12-204ENST00000446026 ABCA5Q8WWZ7 1642 aa14.5□□□□□ -0.09
SMIM12-204ENST00000446026 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
SMIM12-204ENST00000446026 CHD1O14646 1710 aa14.47□□□□□ -0.09
SMIM12-204ENST00000446026 LOC105371045A0A1W2PR82 267 aa14.47□□□□□ -0.09
SMIM12-204ENST00000446026 ABCA10Q8WWZ4 1543 aa14.47□□□□□ -0.09
SMIM12-204ENST00000446026 ZNF608Q9ULD9 1512 aaPredicted RBP14.46□□□□□ -0.09
SMIM12-204ENST00000446026 MAGI1Q96QZ7 1491 aaPredicted RBP14.45□□□□□ -0.1
SMIM12-204ENST00000446026 SOGA1O94964 1423 aa14.41□□□□□ -0.1
SMIM12-204ENST00000446026 GRIN2BQ13224 1484 aa14.39□□□□□ -0.11
SMIM12-204ENST00000446026 SYNJ1O43426 1573 aa14.38□□□□□ -0.11
SMIM12-204ENST00000446026 CLASP1Q7Z460 1538 aa14.36□□□□□ -0.11
SMIM12-204ENST00000446026 ERICH3Q5RHP9 1530 aa14.35□□□□□ -0.11
SMIM12-204ENST00000446026 RAD54L2Q9Y4B4 1467 aa14.35□□□□□ -0.11
SMIM12-204ENST00000446026 WRNQ14191 1432 aaPredicted RBP eCLIP14.35□□□□□ -0.11
SMIM12-204ENST00000446026 ADAMTS12P58397 1594 aa14.33□□□□□ -0.12
SMIM12-204ENST00000446026 SYNJ2O15056 1496 aa14.33□□□□□ -0.12
SMIM12-204ENST00000446026 RIMBP3CA6NJZ7 1639 aa14.31□□□□□ -0.12
SMIM12-204ENST00000446026 RIMBP3BA6NNM3 1639 aa14.31□□□□□ -0.12
SMIM12-204ENST00000446026 RIMBP3Q9UFD9 1639 aa14.31□□□□□ -0.12
SMIM12-204ENST00000446026 GAPVD1Q14C86 1478 aa14.31□□□□□ -0.12
SMIM12-204ENST00000446026 AQRO60306 1485 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMIM12-204ENST00000446026 SNAPC4Q5SXM2 1469 aa14.31□□□□□ -0.12
SMIM12-204ENST00000446026 OSCARQ8IYS5 282 aa14.3□□□□□ -0.12
SMIM12-204ENST00000446026 CUL7Q14999 1698 aa14.26□□□□□ -0.13
SMIM12-204ENST00000446026 SHROOM2Q13796 1616 aa14.25□□□□□ -0.13
SMIM12-204ENST00000446026 ARHGEF11O15085 1522 aa14.24□□□□□ -0.13
SMIM12-204ENST00000446026 MYT1Q01538 1121 aa14.21□□□□□ -0.13
SMIM12-204ENST00000446026 SCAF1Q9H7N4 1312 aaKnown RBP14.21□□□□□ -0.14
SMIM12-204ENST00000446026 FHAD1B1AJZ9 1412 aa14.2□□□□□ -0.14
SMIM12-204ENST00000446026 TDRD9Q8NDG6 1382 aaKnown RBP14.2□□□□□ -0.14
SMIM12-204ENST00000446026 NUP160Q12769 1436 aa14.19□□□□□ -0.14
SMIM12-204ENST00000446026 GRIN2AQ12879 1464 aa14.19□□□□□ -0.14
SMIM12-204ENST00000446026 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
SMIM12-204ENST00000446026 CEP170Q5SW79 1584 aa14.14□□□□□ -0.15
SMIM12-204ENST00000446026 RUSC2Q8N2Y8 1516 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms