RNA–Protein interactions for RNA: ENST00000445594.1

PABPC1P6-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 6, humanhuman

BASIC

Gene PABPC1P6, Length 1,829 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P6-201ENST00000445594 NISCHQ9Y2I1 1504 aa14.01□□□□□ -0.17
PABPC1P6-201ENST00000445594 AEBP2Q6ZN18 517 aaPredicted RBP13.9□□□□□ -0.18
PABPC1P6-201ENST00000445594 CHIC1Q5VXU3 224 aa13.71□□□□□ -0.21
PABPC1P6-201ENST00000445594 ABCC9O60706 1549 aa12.76□□□□□ -0.37
PABPC1P6-201ENST00000445594 CCDC180Q9P1Z9 1646 aa12.74□□□□□ -0.37
PABPC1P6-201ENST00000445594 RB1CC1Q8TDY2 1594 aa12.13□□□□□ -0.47
PABPC1P6-201ENST00000445594 DNAJC5BQ9UF47 199 aa12.08□□□□□ -0.48
PABPC1P6-201ENST00000445594 PHF23Q9BUL5 403 aaPredicted RBP12.07□□□□□ -0.48
PABPC1P6-201ENST00000445594 NACADO15069 1562 aa12.01□□□□□ -0.49
PABPC1P6-201ENST00000445594 UNC13AQ9UPW8 1703 aa11.99□□□□□ -0.49
PABPC1P6-201ENST00000445594 SENP3Q9H4L4 574 aaPredicted RBP11.83□□□□□ -0.52
PABPC1P6-201ENST00000445594 BICRAQ9NZM4 1560 aa11.83□□□□□ -0.52
PABPC1P6-201ENST00000445594 MYO15BQ96JP2 1530 aa11.8□□□□□ -0.52
PABPC1P6-201ENST00000445594 PABPN1Q86U42 306 aaKnown RBP eCLIP11.78□□□□□ -0.52
PABPC1P6-201ENST00000445594 DCAF8L2P0C7V8 631 aa11.7□□□□□ -0.54
PABPC1P6-201ENST00000445594 SHROOM4Q9ULL8 1493 aa11.63□□□□□ -0.55
PABPC1P6-201ENST00000445594 ZCCHC6Q5VYS8 1495 aaKnown RBP11.59□□□□□ -0.55
PABPC1P6-201ENST00000445594 DCAF1Q9Y4B6 1507 aa11.59□□□□□ -0.55
PABPC1P6-201ENST00000445594 CC2D2AQ9P2K1 1620 aa11.58□□□□□ -0.56
PABPC1P6-201ENST00000445594 SCRIBQ14160 1630 aa11.52□□□□□ -0.56
PABPC1P6-201ENST00000445594 EIF4G1Q04637 1599 aaKnown RBP11.51□□□□□ -0.57
PABPC1P6-201ENST00000445594 CECR2Q9BXF3 1484 aa11.51□□□□□ -0.57
PABPC1P6-201ENST00000445594 PLPPR3Q6T4P5 718 aa11.22□□□□□ -0.61
PABPC1P6-201ENST00000445594 DNAJC5Q9H3Z4 198 aa11.19□□□□□ -0.62
PABPC1P6-201ENST00000445594 CUX2O14529 1486 aa11.09□□□□□ -0.63
PABPC1P6-201ENST00000445594 FOXD1Q16676 465 aa11.09□□□□□ -0.63
PABPC1P6-201ENST00000445594 NCAPD3P42695 1498 aa11.05□□□□□ -0.64
PABPC1P6-201ENST00000445594 HMGXB3Q12766 1538 aa11□□□□□ -0.65
PABPC1P6-201ENST00000445594 ERCC6Q03468 1493 aa11□□□□□ -0.65
PABPC1P6-201ENST00000445594 SMARCA4P51532 1647 aa11□□□□□ -0.65
PABPC1P6-201ENST00000445594 ATAD2BQ9ULI0 1458 aa11□□□□□ -0.65
PABPC1P6-201ENST00000445594 SMARCA2P51531 1590 aa10.98□□□□□ -0.65
PABPC1P6-201ENST00000445594 THOC2Q8NI27 1593 aaKnown RBP10.94□□□□□ -0.66
PABPC1P6-201ENST00000445594 NESP48681 1621 aa10.94□□□□□ -0.66
PABPC1P6-201ENST00000445594 PEG3Q9GZU2 1588 aa10.91□□□□□ -0.66
PABPC1P6-201ENST00000445594 BAZ1AQ9NRL2 1556 aaPredicted RBP10.89□□□□□ -0.67
PABPC1P6-201ENST00000445594 KIF21AQ7Z4S6 1674 aa10.89□□□□□ -0.67
PABPC1P6-201ENST00000445594 LAMC3Q9Y6N6 1575 aa10.88□□□□□ -0.67
PABPC1P6-201ENST00000445594 BAZ1BQ9UIG0 1483 aaKnown RBP10.87□□□□□ -0.67
PABPC1P6-201ENST00000445594 MROH2BQ7Z745 1585 aa10.79□□□□□ -0.68
PABPC1P6-201ENST00000445594 PDS5BQ9NTI5 1447 aa10.73□□□□□ -0.69
PABPC1P6-201ENST00000445594 WDR62O43379 1518 aa10.72□□□□□ -0.69
PABPC1P6-201ENST00000445594 MRC2Q9UBG0 1479 aa10.7□□□□□ -0.7
PABPC1P6-201ENST00000445594 WIZO95785 1651 aa10.69□□□□□ -0.7
PABPC1P6-201ENST00000445594 CADPSQ9ULU8 1353 aa10.67□□□□□ -0.7
PABPC1P6-201ENST00000445594 CEP164Q9UPV0 1460 aa10.62□□□□□ -0.71
PABPC1P6-201ENST00000445594 ADRA2BP18089 450 aa10.61□□□□□ -0.71
PABPC1P6-201ENST00000445594 PPP6R1Q9UPN7 881 aa10.61□□□□□ -0.71
PABPC1P6-201ENST00000445594 POTEDQ86YR6 584 aa10.6□□□□□ -0.71
PABPC1P6-201ENST00000445594 PRDM2Q13029 1718 aa10.6□□□□□ -0.71
PABPC1P6-201ENST00000445594 TRIM41Q8WV44 630 aa10.59□□□□□ -0.71
PABPC1P6-201ENST00000445594 FANCD2Q9BXW9 1451 aa10.58□□□□□ -0.72
PABPC1P6-201ENST00000445594 CFTRP13569 1480 aa10.56□□□□□ -0.72
PABPC1P6-201ENST00000445594 TOP2AP11388 1531 aaKnown RBP10.53□□□□□ -0.72
PABPC1P6-201ENST00000445594 URB2Q14146 1524 aaKnown RBP10.53□□□□□ -0.72
PABPC1P6-201ENST00000445594 RIMBP3CA6NJZ7 1639 aa10.48□□□□□ -0.73
PABPC1P6-201ENST00000445594 RIMBP3BA6NNM3 1639 aa10.48□□□□□ -0.73
PABPC1P6-201ENST00000445594 RIMBP3Q9UFD9 1639 aa10.48□□□□□ -0.73
PABPC1P6-201ENST00000445594 RSF1Q96T23 1441 aaPredicted RBP10.47□□□□□ -0.73
PABPC1P6-201ENST00000445594 OSCARQ8IYS5 282 aa10.44□□□□□ -0.74
PABPC1P6-201ENST00000445594 MSH5O43196 834 aa10.42□□□□□ -0.74
PABPC1P6-201ENST00000445594 ZNF608Q9ULD9 1512 aaPredicted RBP10.41□□□□□ -0.74
PABPC1P6-201ENST00000445594 EIF4G3O43432 1585 aaKnown RBP10.41□□□□□ -0.74
PABPC1P6-201ENST00000445594 IFT140Q96RY7 1462 aa10.4□□□□□ -0.74
PABPC1P6-201ENST00000445594 CHD1O14646 1710 aa10.39□□□□□ -0.75
PABPC1P6-201ENST00000445594 ARHGEF11O15085 1522 aa10.39□□□□□ -0.75
PABPC1P6-201ENST00000445594 TOPBP1Q92547 1522 aa10.38□□□□□ -0.75
PABPC1P6-201ENST00000445594 CCDC88BA6NC98 1476 aa10.36□□□□□ -0.75
PABPC1P6-201ENST00000445594 TARBP1Q13395 1621 aaKnown RBP10.36□□□□□ -0.75
PABPC1P6-201ENST00000445594 DNMBPQ6XZF7 1577 aa10.36□□□□□ -0.75
PABPC1P6-201ENST00000445594 ABCC8Q09428 1581 aa10.33□□□□□ -0.76
PABPC1P6-201ENST00000445594 PIAS4Q8N2W9 510 aaPredicted RBP10.29□□□□□ -0.76
PABPC1P6-201ENST00000445594 ARAP1Q96P48 1450 aa10.28□□□□□ -0.76
PABPC1P6-201ENST00000445594 POLA1P09884 1462 aaPredicted RBP10.26□□□□□ -0.77
PABPC1P6-201ENST00000445594 AQRO60306 1485 aaKnown RBP eCLIP10.25□□□□□ -0.77
PABPC1P6-201ENST00000445594 WDR97A6NE52 1622 aa10.25□□□□□ -0.77
PABPC1P6-201ENST00000445594 CLASP1Q7Z460 1538 aa10.23□□□□□ -0.77
PABPC1P6-201ENST00000445594 CYB5RLQ6IPT4 315 aa10.21□□□□□ -0.78
PABPC1P6-201ENST00000445594 RAD54L2Q9Y4B4 1467 aa10.2□□□□□ -0.78
PABPC1P6-201ENST00000445594 PBRM1Q86U86 1689 aa10.19□□□□□ -0.78
PABPC1P6-201ENST00000445594 SNAPC4Q5SXM2 1469 aa10.18□□□□□ -0.78
PABPC1P6-201ENST00000445594 SYNJ1O43426 1573 aa10.17□□□□□ -0.78
PABPC1P6-201ENST00000445594 FGD5Q6ZNL6 1462 aa10.17□□□□□ -0.78
PABPC1P6-201ENST00000445594 MAGI1Q96QZ7 1491 aaPredicted RBP10.16□□□□□ -0.78
PABPC1P6-201ENST00000445594 CUX1P39880 1505 aa10.16□□□□□ -0.78
PABPC1P6-201ENST00000445594 SOGA1O94964 1423 aa10.15□□□□□ -0.78
PABPC1P6-201ENST00000445594 TDRD9Q8NDG6 1382 aaKnown RBP10.14□□□□□ -0.79
PABPC1P6-201ENST00000445594 FBLN2P98095 1184 aa10.13□□□□□ -0.79
PABPC1P6-201ENST00000445594 TRHP20396 242 aaPredicted RBP10.12□□□□□ -0.79
PABPC1P6-201ENST00000445594 SYNJ2O15056 1496 aa10.12□□□□□ -0.79
PABPC1P6-201ENST00000445594 GRIN2BQ13224 1484 aa10.12□□□□□ -0.79
PABPC1P6-201ENST00000445594 ABCA5Q8WWZ7 1642 aa10.11□□□□□ -0.79
PABPC1P6-201ENST00000445594 GAPVD1Q14C86 1478 aa10.06□□□□□ -0.8
PABPC1P6-201ENST00000445594 ABCA10Q8WWZ4 1543 aa10.05□□□□□ -0.8
PABPC1P6-201ENST00000445594 CHMP7Q8WUX9 453 aaPredicted RBP10.05□□□□□ -0.8
PABPC1P6-201ENST00000445594 ERCC6L2Q5T890 1561 aa10.04□□□□□ -0.8
PABPC1P6-201ENST00000445594 ADAMTS12P58397 1594 aa10.04□□□□□ -0.8
PABPC1P6-201ENST00000445594 SHROOM2Q13796 1616 aa10.03□□□□□ -0.8
PABPC1P6-201ENST00000445594 CEP170Q5SW79 1584 aa10.02□□□□□ -0.81
PABPC1P6-201ENST00000445594 KIF13AQ9H1H9 1805 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms