RNA–Protein interactions for RNA: ENST00000445558.6

PSMD2-207, Transcript of proteasome 26S subunit, non-ATPase 2, humanhuman

TSL 5

Gene PSMD2, Length 825 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD2-207ENST00000445558 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
PSMD2-207ENST00000445558 ABCC9O60706 1549 aa24.71■■□□□ 1.55
PSMD2-207ENST00000445558 CCDC180Q9P1Z9 1646 aa24.43■■□□□ 1.5
PSMD2-207ENST00000445558 RB1CC1Q8TDY2 1594 aa23.4■■□□□ 1.34
PSMD2-207ENST00000445558 DNAJC5BQ9UF47 199 aa23.35■■□□□ 1.33
PSMD2-207ENST00000445558 NACADO15069 1562 aa23.2■■□□□ 1.3
PSMD2-207ENST00000445558 DCAF8L2P0C7V8 631 aa23.09■■□□□ 1.29
PSMD2-207ENST00000445558 PABPN1Q86U42 306 aaKnown RBP eCLIP22.99■■□□□ 1.27
PSMD2-207ENST00000445558 MYO15BQ96JP2 1530 aa22.81■■□□□ 1.24
PSMD2-207ENST00000445558 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
PSMD2-207ENST00000445558 BICRAQ9NZM4 1560 aa22.68■■□□□ 1.22
PSMD2-207ENST00000445558 ZCCHC6Q5VYS8 1495 aaKnown RBP22.47■■□□□ 1.19
PSMD2-207ENST00000445558 SHROOM4Q9ULL8 1493 aa22.44■■□□□ 1.18
PSMD2-207ENST00000445558 DCAF1Q9Y4B6 1507 aa22.42■■□□□ 1.18
PSMD2-207ENST00000445558 CECR2Q9BXF3 1484 aa22.29■■□□□ 1.16
PSMD2-207ENST00000445558 SCRIBQ14160 1630 aa22.28■■□□□ 1.16
PSMD2-207ENST00000445558 CC2D2AQ9P2K1 1620 aa22.28■■□□□ 1.16
PSMD2-207ENST00000445558 EIF4G1Q04637 1599 aaKnown RBP22.19■■□□□ 1.14
PSMD2-207ENST00000445558 DNAJC5Q9H3Z4 198 aa21.64■■□□□ 1.05
PSMD2-207ENST00000445558 NCAPD3P42695 1498 aa21.43■■□□□ 1.02
PSMD2-207ENST00000445558 CUX2O14529 1486 aa21.4■■□□□ 1.02
PSMD2-207ENST00000445558 ERCC6Q03468 1493 aa21.39■■□□□ 1.02
PSMD2-207ENST00000445558 ATAD2BQ9ULI0 1458 aa21.33■■□□□ 1.01
PSMD2-207ENST00000445558 SMARCA2P51531 1590 aa21.26■□□□□ 0.99
PSMD2-207ENST00000445558 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
PSMD2-207ENST00000445558 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
PSMD2-207ENST00000445558 BAZ1BQ9UIG0 1483 aaKnown RBP21.13■□□□□ 0.97
PSMD2-207ENST00000445558 NESP48681 1621 aa21.13■□□□□ 0.97
PSMD2-207ENST00000445558 BAZ1AQ9NRL2 1556 aaPredicted RBP21.11■□□□□ 0.97
PSMD2-207ENST00000445558 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.95
PSMD2-207ENST00000445558 LAMC3Q9Y6N6 1575 aa20.96■□□□□ 0.95
PSMD2-207ENST00000445558 THOC2Q8NI27 1593 aaKnown RBP20.94■□□□□ 0.94
PSMD2-207ENST00000445558 MROH2BQ7Z745 1585 aa20.91■□□□□ 0.94
PSMD2-207ENST00000445558 PDS5BQ9NTI5 1447 aa20.9■□□□□ 0.94
PSMD2-207ENST00000445558 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
PSMD2-207ENST00000445558 CADPSQ9ULU8 1353 aa20.79■□□□□ 0.92
PSMD2-207ENST00000445558 MRC2Q9UBG0 1479 aa20.71■□□□□ 0.91
PSMD2-207ENST00000445558 WDR62O43379 1518 aa20.65■□□□□ 0.9
PSMD2-207ENST00000445558 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
PSMD2-207ENST00000445558 WIZO95785 1651 aa20.61■□□□□ 0.89
PSMD2-207ENST00000445558 CEP164Q9UPV0 1460 aa20.59■□□□□ 0.89
PSMD2-207ENST00000445558 FANCD2Q9BXW9 1451 aa20.55■□□□□ 0.88
PSMD2-207ENST00000445558 CFTRP13569 1480 aa20.49■□□□□ 0.87
PSMD2-207ENST00000445558 RSF1Q96T23 1441 aaPredicted RBP20.43■□□□□ 0.86
PSMD2-207ENST00000445558 OSCARQ8IYS5 282 aa20.4■□□□□ 0.86
PSMD2-207ENST00000445558 TOP2AP11388 1531 aaKnown RBP20.39■□□□□ 0.85
PSMD2-207ENST00000445558 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
PSMD2-207ENST00000445558 IFT140Q96RY7 1462 aa20.19■□□□□ 0.82
PSMD2-207ENST00000445558 CCDC88BA6NC98 1476 aa20.17■□□□□ 0.82
PSMD2-207ENST00000445558 ZNF608Q9ULD9 1512 aaPredicted RBP20.15■□□□□ 0.82
PSMD2-207ENST00000445558 PRDM2Q13029 1718 aa20.15■□□□□ 0.82
PSMD2-207ENST00000445558 TOPBP1Q92547 1522 aa20.12■□□□□ 0.81
PSMD2-207ENST00000445558 RIMBP3CA6NJZ7 1639 aa20.09■□□□□ 0.81
PSMD2-207ENST00000445558 RIMBP3BA6NNM3 1639 aa20.09■□□□□ 0.81
PSMD2-207ENST00000445558 RIMBP3Q9UFD9 1639 aa20.09■□□□□ 0.81
PSMD2-207ENST00000445558 ABCC8Q09428 1581 aa20.08■□□□□ 0.8
PSMD2-207ENST00000445558 ARHGEF11O15085 1522 aa20.04■□□□□ 0.8
PSMD2-207ENST00000445558 EIF4G3O43432 1585 aaKnown RBP20.01■□□□□ 0.79
PSMD2-207ENST00000445558 DNMBPQ6XZF7 1577 aa20.01■□□□□ 0.79
PSMD2-207ENST00000445558 AQRO60306 1485 aaKnown RBP eCLIP19.95■□□□□ 0.788e-7■■□□□ 13.7
PSMD2-207ENST00000445558 CYB5RLQ6IPT4 315 aa19.95■□□□□ 0.78
PSMD2-207ENST00000445558 FBLN2P98095 1184 aa19.92■□□□□ 0.78
PSMD2-207ENST00000445558 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
PSMD2-207ENST00000445558 POLA1P09884 1462 aaPredicted RBP19.9■□□□□ 0.78
PSMD2-207ENST00000445558 CHD1O14646 1710 aa19.85■□□□□ 0.77
PSMD2-207ENST00000445558 ARAP1Q96P48 1450 aa19.83■□□□□ 0.76
PSMD2-207ENST00000445558 RAD54L2Q9Y4B4 1467 aa19.82■□□□□ 0.76
PSMD2-207ENST00000445558 SOGA1O94964 1423 aa19.82■□□□□ 0.76
PSMD2-207ENST00000445558 TRHP20396 242 aaPredicted RBP19.81■□□□□ 0.76
PSMD2-207ENST00000445558 TDRD9Q8NDG6 1382 aaKnown RBP19.81■□□□□ 0.76
PSMD2-207ENST00000445558 SNAPC4Q5SXM2 1469 aa19.75■□□□□ 0.75
PSMD2-207ENST00000445558 FGD5Q6ZNL6 1462 aa19.73■□□□□ 0.75
PSMD2-207ENST00000445558 CHMP7Q8WUX9 453 aaPredicted RBP19.73■□□□□ 0.75
PSMD2-207ENST00000445558 WDR97A6NE52 1622 aa19.73■□□□□ 0.75
PSMD2-207ENST00000445558 MAGI1Q96QZ7 1491 aaPredicted RBP19.7■□□□□ 0.74
PSMD2-207ENST00000445558 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
PSMD2-207ENST00000445558 CUX1P39880 1505 aa19.67■□□□□ 0.74
PSMD2-207ENST00000445558 CLASP1Q7Z460 1538 aa19.67■□□□□ 0.74
PSMD2-207ENST00000445558 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
PSMD2-207ENST00000445558 SYNJ2O15056 1496 aa19.64■□□□□ 0.73
PSMD2-207ENST00000445558 GAPVD1Q14C86 1478 aa19.57■□□□□ 0.72
PSMD2-207ENST00000445558 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
PSMD2-207ENST00000445558 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
PSMD2-207ENST00000445558 ABCA5Q8WWZ7 1642 aa19.46■□□□□ 0.71
PSMD2-207ENST00000445558 WRNQ14191 1432 aaPredicted RBP eCLIP19.42■□□□□ 0.7
PSMD2-207ENST00000445558 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
PSMD2-207ENST00000445558 GRIN2AQ12879 1464 aa19.41■□□□□ 0.7
PSMD2-207ENST00000445558 SUPT5HO00267 1087 aaKnown RBP19.39■□□□□ 0.69
PSMD2-207ENST00000445558 NUP160Q12769 1436 aa19.36■□□□□ 0.69
PSMD2-207ENST00000445558 ADAMTS12P58397 1594 aa19.35■□□□□ 0.69
PSMD2-207ENST00000445558 ERCC6L2Q5T890 1561 aa19.33■□□□□ 0.69
PSMD2-207ENST00000445558 FHAD1B1AJZ9 1412 aa19.33■□□□□ 0.68
PSMD2-207ENST00000445558 CEP170Q5SW79 1584 aa19.32■□□□□ 0.68
PSMD2-207ENST00000445558 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
PSMD2-207ENST00000445558 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
PSMD2-207ENST00000445558 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
PSMD2-207ENST00000445558 SHROOM2Q13796 1616 aa19.24■□□□□ 0.67
PSMD2-207ENST00000445558 PRG4Q92954 1404 aaPredicted RBP19.2■□□□□ 0.66
PSMD2-207ENST00000445558 JPH4Q96JJ6 628 aa19.18■□□□□ 0.66
PSMD2-207ENST00000445558 NPM1P06748 294 aaKnown RBP eCLIP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms