RNA–Protein interactions for RNA: ENST00000443855.5

TBC1D1-208, Transcript of TBC1 domain family member 1, humanhuman

TSL 5

Gene TBC1D1, Length 755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-208ENST00000443855 NISCHQ9Y2I1 1504 aa32.35■■■□□ 2.77
TBC1D1-208ENST00000443855 CCDC180Q9P1Z9 1646 aa28.5■■■□□ 2.15
TBC1D1-208ENST00000443855 ABCC9O60706 1549 aa27.14■■□□□ 1.94
TBC1D1-208ENST00000443855 ZCCHC6Q5VYS8 1495 aaKnown RBP27.08■■□□□ 1.93
TBC1D1-208ENST00000443855 DCAF1Q9Y4B6 1507 aa26.82■■□□□ 1.88
TBC1D1-208ENST00000443855 MYO15BQ96JP2 1530 aa26.68■■□□□ 1.86
TBC1D1-208ENST00000443855 NACADO15069 1562 aa26.58■■□□□ 1.85
TBC1D1-208ENST00000443855 DCAF8L2P0C7V8 631 aa26.56■■□□□ 1.84
TBC1D1-208ENST00000443855 RB1CC1Q8TDY2 1594 aa26.42■■□□□ 1.82
TBC1D1-208ENST00000443855 UNC13AQ9UPW8 1703 aa26.04■■□□□ 1.76
TBC1D1-208ENST00000443855 SCRIBQ14160 1630 aa25.98■■□□□ 1.75
TBC1D1-208ENST00000443855 AEBP2Q6ZN18 517 aaPredicted RBP25.9■■□□□ 1.74
TBC1D1-208ENST00000443855 SHROOM4Q9ULL8 1493 aa25.84■■□□□ 1.73
TBC1D1-208ENST00000443855 CHIC1Q5VXU3 224 aa25.74■■□□□ 1.71
TBC1D1-208ENST00000443855 BICRAQ9NZM4 1560 aa25.73■■□□□ 1.71
TBC1D1-208ENST00000443855 PABPN1Q86U42 306 aaKnown RBP eCLIP25.46■■□□□ 1.67
TBC1D1-208ENST00000443855 CECR2Q9BXF3 1484 aa25.14■■□□□ 1.61
TBC1D1-208ENST00000443855 BAZ1AQ9NRL2 1556 aaPredicted RBP24.98■■□□□ 1.59
TBC1D1-208ENST00000443855 SMARCA4P51532 1647 aa24.97■■□□□ 1.59
TBC1D1-208ENST00000443855 MROH2BQ7Z745 1585 aa24.96■■□□□ 1.59
TBC1D1-208ENST00000443855 EIF4G1Q04637 1599 aaKnown RBP24.9■■□□□ 1.58
TBC1D1-208ENST00000443855 RSF1Q96T23 1441 aaPredicted RBP24.89■■□□□ 1.58
TBC1D1-208ENST00000443855 PEG3Q9GZU2 1588 aa24.75■■□□□ 1.55
TBC1D1-208ENST00000443855 WIZO95785 1651 aa24.75■■□□□ 1.55
TBC1D1-208ENST00000443855 CC2D2AQ9P2K1 1620 aa24.65■■□□□ 1.54
TBC1D1-208ENST00000443855 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.53
TBC1D1-208ENST00000443855 SUPT5HO00267 1087 aaKnown RBP24.63■■□□□ 1.53
TBC1D1-208ENST00000443855 SMARCA2P51531 1590 aa24.6■■□□□ 1.53
TBC1D1-208ENST00000443855 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
TBC1D1-208ENST00000443855 TOP2AP11388 1531 aaKnown RBP24.46■■□□□ 1.51
TBC1D1-208ENST00000443855 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
TBC1D1-208ENST00000443855 DNAJC5BQ9UF47 199 aa24.41■■□□□ 1.5
TBC1D1-208ENST00000443855 BAZ1BQ9UIG0 1483 aaKnown RBP24.4■■□□□ 1.5
TBC1D1-208ENST00000443855 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
TBC1D1-208ENST00000443855 CFTRP13569 1480 aa23.84■■□□□ 1.41
TBC1D1-208ENST00000443855 PRDM2Q13029 1718 aa23.83■■□□□ 1.41
TBC1D1-208ENST00000443855 CADPSQ9ULU8 1353 aa23.81■■□□□ 1.4
TBC1D1-208ENST00000443855 LAMC3Q9Y6N6 1575 aa23.76■■□□□ 1.39
TBC1D1-208ENST00000443855 NESP48681 1621 aa23.74■■□□□ 1.39
TBC1D1-208ENST00000443855 KIF21AQ7Z4S6 1674 aa23.54■■□□□ 1.36
TBC1D1-208ENST00000443855 FANCD2Q9BXW9 1451 aa23.53■■□□□ 1.36
TBC1D1-208ENST00000443855 PDS5BQ9NTI5 1447 aa23.5■■□□□ 1.35
TBC1D1-208ENST00000443855 ABCC8Q09428 1581 aa23.49■■□□□ 1.35
TBC1D1-208ENST00000443855 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
TBC1D1-208ENST00000443855 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
TBC1D1-208ENST00000443855 SYNJ1O43426 1573 aa23.38■■□□□ 1.33
TBC1D1-208ENST00000443855 BIVM-ERCC5R4GMW8 1640 aa23.37■■□□□ 1.33
TBC1D1-208ENST00000443855 CUX1P39880 1505 aa23.36■■□□□ 1.33
TBC1D1-208ENST00000443855 TOP2BQ02880 1626 aa23.33■■□□□ 1.33
TBC1D1-208ENST00000443855 URB2Q14146 1524 aaKnown RBP23.31■■□□□ 1.32
TBC1D1-208ENST00000443855 DNMBPQ6XZF7 1577 aa23.29■■□□□ 1.32
TBC1D1-208ENST00000443855 THOC2Q8NI27 1593 aaKnown RBP23.27■■□□□ 1.32
TBC1D1-208ENST00000443855 TOPBP1Q92547 1522 aa23.26■■□□□ 1.31
TBC1D1-208ENST00000443855 ERCC6Q03468 1493 aa23.25■■□□□ 1.31
TBC1D1-208ENST00000443855 MRC2Q9UBG0 1479 aa23.25■■□□□ 1.31
TBC1D1-208ENST00000443855 TRIM41Q8WV44 630 aa23.22■■□□□ 1.31
TBC1D1-208ENST00000443855 WDR62O43379 1518 aa23.21■■□□□ 1.31
TBC1D1-208ENST00000443855 FGD5Q6ZNL6 1462 aa23.13■■□□□ 1.29
TBC1D1-208ENST00000443855 POLA1P09884 1462 aaPredicted RBP23.11■■□□□ 1.29
TBC1D1-208ENST00000443855 CUX2O14529 1486 aa23.05■■□□□ 1.28
TBC1D1-208ENST00000443855 TARBP1Q13395 1621 aaKnown RBP23.03■■□□□ 1.28
TBC1D1-208ENST00000443855 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
TBC1D1-208ENST00000443855 RAD54L2Q9Y4B4 1467 aa22.99■■□□□ 1.27
TBC1D1-208ENST00000443855 SOGA1O94964 1423 aa22.99■■□□□ 1.27
TBC1D1-208ENST00000443855 ABCA10Q8WWZ4 1543 aa22.96■■□□□ 1.27
TBC1D1-208ENST00000443855 RUSC2Q8N2Y8 1516 aa22.94■■□□□ 1.26
TBC1D1-208ENST00000443855 IFT140Q96RY7 1462 aa22.9■■□□□ 1.26
TBC1D1-208ENST00000443855 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
TBC1D1-208ENST00000443855 EEA1Q15075 1411 aa22.83■■□□□ 1.25
TBC1D1-208ENST00000443855 KIF27Q86VH2 1401 aa22.82■■□□□ 1.24
TBC1D1-208ENST00000443855 ZNF608Q9ULD9 1512 aaPredicted RBP22.8■■□□□ 1.24
TBC1D1-208ENST00000443855 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
TBC1D1-208ENST00000443855 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
TBC1D1-208ENST00000443855 GAPVD1Q14C86 1478 aa22.73■■□□□ 1.23
TBC1D1-208ENST00000443855 EIF4G3O43432 1585 aaKnown RBP22.73■■□□□ 1.23
TBC1D1-208ENST00000443855 FAM9AQ8IZU1 332 aaPredicted RBP22.73■■□□□ 1.23
TBC1D1-208ENST00000443855 AQRO60306 1485 aaKnown RBP eCLIP22.73■■□□□ 1.23
TBC1D1-208ENST00000443855 CSRNP3Q8WYN3 585 aa22.72■■□□□ 1.23
TBC1D1-208ENST00000443855 IGF1RP08069 1367 aa22.72■■□□□ 1.23
TBC1D1-208ENST00000443855 ERICH3Q5RHP9 1530 aa22.69■■□□□ 1.22
TBC1D1-208ENST00000443855 PRXQ9BXM0 1461 aa22.64■■□□□ 1.21
TBC1D1-208ENST00000443855 GRIN2BQ13224 1484 aa22.63■■□□□ 1.21
TBC1D1-208ENST00000443855 KIF21BO75037 1637 aa22.63■■□□□ 1.21
TBC1D1-208ENST00000443855 CUL7Q14999 1698 aa22.62■■□□□ 1.21
TBC1D1-208ENST00000443855 PHF23Q9BUL5 403 aaPredicted RBP22.6■■□□□ 1.21
TBC1D1-208ENST00000443855 CARMIL1Q5VZK9 1371 aa22.55■■□□□ 1.2
TBC1D1-208ENST00000443855 ADAMTS12P58397 1594 aa22.55■■□□□ 1.2
TBC1D1-208ENST00000443855 LOC105371045A0A1W2PR82 267 aa22.51■■□□□ 1.19
TBC1D1-208ENST00000443855 SNAPC4Q5SXM2 1469 aa22.51■■□□□ 1.19
TBC1D1-208ENST00000443855 MAGI1Q96QZ7 1491 aaPredicted RBP22.51■■□□□ 1.19
TBC1D1-208ENST00000443855 RAPGEF2Q9Y4G8 1499 aa22.51■■□□□ 1.19
TBC1D1-208ENST00000443855 FHAD1B1AJZ9 1412 aa22.48■■□□□ 1.19
TBC1D1-208ENST00000443855 GOLGA3Q08378 1498 aa22.47■■□□□ 1.19
TBC1D1-208ENST00000443855 SYNJ2O15056 1496 aa22.41■■□□□ 1.18
TBC1D1-208ENST00000443855 CHD1O14646 1710 aa22.38■■□□□ 1.17
TBC1D1-208ENST00000443855 GRIN2AQ12879 1464 aa22.36■■□□□ 1.17
TBC1D1-208ENST00000443855 TNIKQ9UKE5 1360 aa22.35■■□□□ 1.17
TBC1D1-208ENST00000443855 CTTNBP2Q8WZ74 1663 aa22.34■■□□□ 1.17
TBC1D1-208ENST00000443855 EHMT2Q96KQ7 1210 aa22.33■■□□□ 1.17
TBC1D1-208ENST00000443855 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms