RNA–Protein interactions for RNA: ENST00000443037.1

SOX9-AS1-206, SOX9 antisense RNA 1, humanhuman

TSL 2

Gene SOX9-AS1, Length 394 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-206ENST00000443037 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
SOX9-AS1-206ENST00000443037 AEBP2Q6ZN18 517 aaPredicted RBP34.59■■■■□ 3.13
SOX9-AS1-206ENST00000443037 CHIC1Q5VXU3 224 aa33.45■■■□□ 2.95
SOX9-AS1-206ENST00000443037 CCDC180Q9P1Z9 1646 aa31.11■■■□□ 2.57
SOX9-AS1-206ENST00000443037 ABCC9O60706 1549 aa30.65■■■□□ 2.5
SOX9-AS1-206ENST00000443037 PHF23Q9BUL5 403 aaPredicted RBP29.49■■■□□ 2.31
SOX9-AS1-206ENST00000443037 RB1CC1Q8TDY2 1594 aa29.44■■■□□ 2.3
SOX9-AS1-206ENST00000443037 NACADO15069 1562 aa29.35■■■□□ 2.29
SOX9-AS1-206ENST00000443037 SENP3Q9H4L4 574 aaPredicted RBP29.22■■■□□ 2.27
SOX9-AS1-206ENST00000443037 MYO15BQ96JP2 1530 aa29.12■■■□□ 2.25
SOX9-AS1-206ENST00000443037 DCAF8L2P0C7V8 631 aa29.04■■■□□ 2.24
SOX9-AS1-206ENST00000443037 DCAF1Q9Y4B6 1507 aa28.81■■■□□ 2.2
SOX9-AS1-206ENST00000443037 ZCCHC6Q5VYS8 1495 aaKnown RBP28.81■■■□□ 2.2
SOX9-AS1-206ENST00000443037 UNC13AQ9UPW8 1703 aa28.77■■■□□ 2.2
SOX9-AS1-206ENST00000443037 PABPN1Q86U42 306 aaKnown RBP eCLIP28.56■■■□□ 2.16
SOX9-AS1-206ENST00000443037 DNAJC5BQ9UF47 199 aa28.53■■■□□ 2.16
SOX9-AS1-206ENST00000443037 BICRAQ9NZM4 1560 aa28.53■■■□□ 2.16
SOX9-AS1-206ENST00000443037 SHROOM4Q9ULL8 1493 aa28.34■■■□□ 2.13
SOX9-AS1-206ENST00000443037 SCRIBQ14160 1630 aa28.17■■■□□ 2.1
SOX9-AS1-206ENST00000443037 EIF4G1Q04637 1599 aaKnown RBP27.81■■■□□ 2.04
SOX9-AS1-206ENST00000443037 CC2D2AQ9P2K1 1620 aa27.78■■■□□ 2.04
SOX9-AS1-206ENST00000443037 CECR2Q9BXF3 1484 aa27.65■■■□□ 2.02
SOX9-AS1-206ENST00000443037 FOXD1Q16676 465 aa27.27■■□□□ 1.96
SOX9-AS1-206ENST00000443037 NCAPD3P42695 1498 aa27.08■■□□□ 1.93
SOX9-AS1-206ENST00000443037 SMARCA4P51532 1647 aa27.01■■□□□ 1.91
SOX9-AS1-206ENST00000443037 PLPPR3Q6T4P5 718 aa27■■□□□ 1.91
SOX9-AS1-206ENST00000443037 ATAD2BQ9ULI0 1458 aa26.97■■□□□ 1.91
SOX9-AS1-206ENST00000443037 SMARCA2P51531 1590 aa26.97■■□□□ 1.91
SOX9-AS1-206ENST00000443037 BAZ1AQ9NRL2 1556 aaPredicted RBP26.95■■□□□ 1.9
SOX9-AS1-206ENST00000443037 HMGXB3Q12766 1538 aa26.89■■□□□ 1.89
SOX9-AS1-206ENST00000443037 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
SOX9-AS1-206ENST00000443037 BAZ1BQ9UIG0 1483 aaKnown RBP26.7■■□□□ 1.87
SOX9-AS1-206ENST00000443037 MROH2BQ7Z745 1585 aa26.67■■□□□ 1.86
SOX9-AS1-206ENST00000443037 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
SOX9-AS1-206ENST00000443037 CUX2O14529 1486 aa26.46■■□□□ 1.83
SOX9-AS1-206ENST00000443037 LAMC3Q9Y6N6 1575 aa26.42■■□□□ 1.82
SOX9-AS1-206ENST00000443037 NESP48681 1621 aa26.4■■□□□ 1.82
SOX9-AS1-206ENST00000443037 WIZO95785 1651 aa26.38■■□□□ 1.81
SOX9-AS1-206ENST00000443037 RSF1Q96T23 1441 aaPredicted RBP26.26■■□□□ 1.79
SOX9-AS1-206ENST00000443037 PDS5BQ9NTI5 1447 aa26.25■■□□□ 1.79
SOX9-AS1-206ENST00000443037 CADPSQ9ULU8 1353 aa26.24■■□□□ 1.79
SOX9-AS1-206ENST00000443037 THOC2Q8NI27 1593 aaKnown RBP26.16■■□□□ 1.78
SOX9-AS1-206ENST00000443037 KIF21AQ7Z4S6 1674 aa26.14■■□□□ 1.78
SOX9-AS1-206ENST00000443037 DNAJC5Q9H3Z4 198 aa26.13■■□□□ 1.77
SOX9-AS1-206ENST00000443037 PPP6R1Q9UPN7 881 aa26.11■■□□□ 1.77
SOX9-AS1-206ENST00000443037 TOP2AP11388 1531 aaKnown RBP26.1■■□□□ 1.77
SOX9-AS1-206ENST00000443037 ADRA2BP18089 450 aa26.06■■□□□ 1.76
SOX9-AS1-206ENST00000443037 CFTRP13569 1480 aa26■■□□□ 1.75
SOX9-AS1-206ENST00000443037 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
SOX9-AS1-206ENST00000443037 WDR62O43379 1518 aa25.9■■□□□ 1.74
SOX9-AS1-206ENST00000443037 CEP164Q9UPV0 1460 aa25.89■■□□□ 1.73
SOX9-AS1-206ENST00000443037 FANCD2Q9BXW9 1451 aa25.88■■□□□ 1.73
SOX9-AS1-206ENST00000443037 PRDM2Q13029 1718 aa25.82■■□□□ 1.72
SOX9-AS1-206ENST00000443037 CCDC88BA6NC98 1476 aa25.79■■□□□ 1.72
SOX9-AS1-206ENST00000443037 URB2Q14146 1524 aaKnown RBP25.63■■□□□ 1.69
SOX9-AS1-206ENST00000443037 PIAS4Q8N2W9 510 aaPredicted RBP25.62■■□□□ 1.69
SOX9-AS1-206ENST00000443037 ABCC8Q09428 1581 aa25.53■■□□□ 1.68
SOX9-AS1-206ENST00000443037 TOPBP1Q92547 1522 aa25.42■■□□□ 1.66
SOX9-AS1-206ENST00000443037 IFT140Q96RY7 1462 aa25.4■■□□□ 1.66
SOX9-AS1-206ENST00000443037 DNMBPQ6XZF7 1577 aa25.38■■□□□ 1.65
SOX9-AS1-206ENST00000443037 OSCARQ8IYS5 282 aa25.29■■□□□ 1.64
SOX9-AS1-206ENST00000443037 ZNF608Q9ULD9 1512 aaPredicted RBP25.23■■□□□ 1.63
SOX9-AS1-206ENST00000443037 TARBP1Q13395 1621 aaKnown RBP25.21■■□□□ 1.63
SOX9-AS1-206ENST00000443037 POLA1P09884 1462 aaPredicted RBP25.18■■□□□ 1.62
SOX9-AS1-206ENST00000443037 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
SOX9-AS1-206ENST00000443037 EIF4G3O43432 1585 aaKnown RBP25.14■■□□□ 1.62
SOX9-AS1-206ENST00000443037 MSH5O43196 834 aa25.1■■□□□ 1.61
SOX9-AS1-206ENST00000443037 WDR97A6NE52 1622 aa25.09■■□□□ 1.61
SOX9-AS1-206ENST00000443037 SOGA1O94964 1423 aa25.09■■□□□ 1.61
SOX9-AS1-206ENST00000443037 AQRO60306 1485 aaKnown RBP eCLIP25.06■■□□□ 1.6
SOX9-AS1-206ENST00000443037 CUX1P39880 1505 aa25.06■■□□□ 1.6
SOX9-AS1-206ENST00000443037 FGD5Q6ZNL6 1462 aa25.03■■□□□ 1.6
SOX9-AS1-206ENST00000443037 RAD54L2Q9Y4B4 1467 aa25.02■■□□□ 1.6
SOX9-AS1-206ENST00000443037 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
SOX9-AS1-206ENST00000443037 CHD1O14646 1710 aa24.93■■□□□ 1.58
SOX9-AS1-206ENST00000443037 TRIM41Q8WV44 630 aa24.91■■□□□ 1.58
SOX9-AS1-206ENST00000443037 MAGI1Q96QZ7 1491 aaPredicted RBP24.86■■□□□ 1.57
SOX9-AS1-206ENST00000443037 GRIN2BQ13224 1484 aa24.85■■□□□ 1.57
SOX9-AS1-206ENST00000443037 RIMBP3CA6NJZ7 1639 aa24.85■■□□□ 1.57
SOX9-AS1-206ENST00000443037 RIMBP3BA6NNM3 1639 aa24.85■■□□□ 1.57
SOX9-AS1-206ENST00000443037 RIMBP3Q9UFD9 1639 aa24.85■■□□□ 1.57
SOX9-AS1-206ENST00000443037 ABCA10Q8WWZ4 1543 aa24.84■■□□□ 1.57
SOX9-AS1-206ENST00000443037 ARHGEF11O15085 1522 aa24.81■■□□□ 1.56
SOX9-AS1-206ENST00000443037 FBLN2P98095 1184 aa24.81■■□□□ 1.56
SOX9-AS1-206ENST00000443037 SNAPC4Q5SXM2 1469 aa24.8■■□□□ 1.56
SOX9-AS1-206ENST00000443037 TOP2BQ02880 1626 aa24.79■■□□□ 1.56
SOX9-AS1-206ENST00000443037 BIVM-ERCC5R4GMW8 1640 aa24.79■■□□□ 1.56
SOX9-AS1-206ENST00000443037 WRNQ14191 1432 aaPredicted RBP eCLIP24.79■■□□□ 1.56
SOX9-AS1-206ENST00000443037 GAPVD1Q14C86 1478 aa24.79■■□□□ 1.56
SOX9-AS1-206ENST00000443037 CHMP7Q8WUX9 453 aaPredicted RBP24.76■■□□□ 1.55
SOX9-AS1-206ENST00000443037 PBRM1Q86U86 1689 aa24.75■■□□□ 1.55
SOX9-AS1-206ENST00000443037 SYNJ2O15056 1496 aa24.75■■□□□ 1.55
SOX9-AS1-206ENST00000443037 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
SOX9-AS1-206ENST00000443037 SYNJ1O43426 1573 aa24.7■■□□□ 1.54
SOX9-AS1-206ENST00000443037 CLASP1Q7Z460 1538 aa24.67■■□□□ 1.54
SOX9-AS1-206ENST00000443037 CYB5RLQ6IPT4 315 aa24.59■■□□□ 1.53
SOX9-AS1-206ENST00000443037 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
SOX9-AS1-206ENST00000443037 ARAP1Q96P48 1450 aa24.56■■□□□ 1.52
SOX9-AS1-206ENST00000443037 GRIN2AQ12879 1464 aa24.51■■□□□ 1.51
SOX9-AS1-206ENST00000443037 ADAMTS12P58397 1594 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms