RNA–Protein interactions for RNA: ENST00000441373.1

TRBV22OR9-2-201, Transcript of T cell receptor beta variable 22/OR9-2 (pseudogene), humanhuman

BASIC

Gene TRBV22OR9-2, Length 136 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV22OR9-2-201ENST00000441373 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
TRBV22OR9-2-201ENST00000441373 CCDC180Q9P1Z9 1646 aa21.38■■□□□ 1.01
TRBV22OR9-2-201ENST00000441373 ZCCHC6Q5VYS8 1495 aaKnown RBP20.36■□□□□ 0.85
TRBV22OR9-2-201ENST00000441373 ABCC9O60706 1549 aa20.32■□□□□ 0.84
TRBV22OR9-2-201ENST00000441373 DCAF1Q9Y4B6 1507 aa20.2■□□□□ 0.82
TRBV22OR9-2-201ENST00000441373 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
TRBV22OR9-2-201ENST00000441373 NACADO15069 1562 aa19.98■□□□□ 0.79
TRBV22OR9-2-201ENST00000441373 DCAF8L2P0C7V8 631 aa19.9■□□□□ 0.78
TRBV22OR9-2-201ENST00000441373 RB1CC1Q8TDY2 1594 aa19.83■□□□□ 0.76
TRBV22OR9-2-201ENST00000441373 SCRIBQ14160 1630 aa19.45■□□□□ 0.7
TRBV22OR9-2-201ENST00000441373 UNC13AQ9UPW8 1703 aa19.43■□□□□ 0.7
TRBV22OR9-2-201ENST00000441373 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
TRBV22OR9-2-201ENST00000441373 BICRAQ9NZM4 1560 aa19.3■□□□□ 0.68
TRBV22OR9-2-201ENST00000441373 PABPN1Q86U42 306 aaKnown RBP eCLIP19.08■□□□□ 0.64
TRBV22OR9-2-201ENST00000441373 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
TRBV22OR9-2-201ENST00000441373 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.6
TRBV22OR9-2-201ENST00000441373 SMARCA4P51532 1647 aa18.73■□□□□ 0.59
TRBV22OR9-2-201ENST00000441373 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
TRBV22OR9-2-201ENST00000441373 RSF1Q96T23 1441 aaPredicted RBP18.72■□□□□ 0.59
TRBV22OR9-2-201ENST00000441373 EIF4G1Q04637 1599 aaKnown RBP18.68■□□□□ 0.58
TRBV22OR9-2-201ENST00000441373 PEG3Q9GZU2 1588 aa18.61■□□□□ 0.57
TRBV22OR9-2-201ENST00000441373 WIZO95785 1651 aa18.52■□□□□ 0.56
TRBV22OR9-2-201ENST00000441373 ATAD2BQ9ULI0 1458 aa18.51■□□□□ 0.55
TRBV22OR9-2-201ENST00000441373 SMARCA2P51531 1590 aa18.5■□□□□ 0.55
TRBV22OR9-2-201ENST00000441373 SUPT5HO00267 1087 aaKnown RBP18.47■□□□□ 0.55
TRBV22OR9-2-201ENST00000441373 NCAPD3P42695 1498 aa18.46■□□□□ 0.55
TRBV22OR9-2-201ENST00000441373 CC2D2AQ9P2K1 1620 aa18.46■□□□□ 0.55
TRBV22OR9-2-201ENST00000441373 HMGXB3Q12766 1538 aa18.39■□□□□ 0.53
TRBV22OR9-2-201ENST00000441373 TOP2AP11388 1531 aaKnown RBP18.37■□□□□ 0.53
TRBV22OR9-2-201ENST00000441373 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.52
TRBV22OR9-2-201ENST00000441373 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
TRBV22OR9-2-201ENST00000441373 CCDC88BA6NC98 1476 aa18.17■□□□□ 0.5
TRBV22OR9-2-201ENST00000441373 CFTRP13569 1480 aa17.94■□□□□ 0.46
TRBV22OR9-2-201ENST00000441373 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
TRBV22OR9-2-201ENST00000441373 LAMC3Q9Y6N6 1575 aa17.84■□□□□ 0.45
TRBV22OR9-2-201ENST00000441373 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
TRBV22OR9-2-201ENST00000441373 NESP48681 1621 aa17.78■□□□□ 0.44
TRBV22OR9-2-201ENST00000441373 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
TRBV22OR9-2-201ENST00000441373 CHIC1Q5VXU3 224 aa17.66■□□□□ 0.42
TRBV22OR9-2-201ENST00000441373 FANCD2Q9BXW9 1451 aa17.66■□□□□ 0.42
TRBV22OR9-2-201ENST00000441373 ABCC8Q09428 1581 aa17.6■□□□□ 0.41
TRBV22OR9-2-201ENST00000441373 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.41
TRBV22OR9-2-201ENST00000441373 CEP164Q9UPV0 1460 aa17.57■□□□□ 0.4
TRBV22OR9-2-201ENST00000441373 WRNQ14191 1432 aaPredicted RBP eCLIP17.57■□□□□ 0.4
TRBV22OR9-2-201ENST00000441373 CUX1P39880 1505 aa17.53■□□□□ 0.4
TRBV22OR9-2-201ENST00000441373 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
TRBV22OR9-2-201ENST00000441373 BIVM-ERCC5R4GMW8 1640 aa17.52■□□□□ 0.4
TRBV22OR9-2-201ENST00000441373 SYNJ1O43426 1573 aa17.52■□□□□ 0.39
TRBV22OR9-2-201ENST00000441373 URB2Q14146 1524 aaKnown RBP17.49■□□□□ 0.39
TRBV22OR9-2-201ENST00000441373 DNMBPQ6XZF7 1577 aa17.48■□□□□ 0.39
TRBV22OR9-2-201ENST00000441373 MRC2Q9UBG0 1479 aa17.46■□□□□ 0.39
TRBV22OR9-2-201ENST00000441373 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
TRBV22OR9-2-201ENST00000441373 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
TRBV22OR9-2-201ENST00000441373 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
TRBV22OR9-2-201ENST00000441373 WDR62O43379 1518 aa17.43■□□□□ 0.38
TRBV22OR9-2-201ENST00000441373 THOC2Q8NI27 1593 aaKnown RBP17.43■□□□□ 0.38
TRBV22OR9-2-201ENST00000441373 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
TRBV22OR9-2-201ENST00000441373 POLA1P09884 1462 aaPredicted RBP17.35■□□□□ 0.37
TRBV22OR9-2-201ENST00000441373 CUX2O14529 1486 aa17.3■□□□□ 0.36
TRBV22OR9-2-201ENST00000441373 TARBP1Q13395 1621 aaKnown RBP17.27■□□□□ 0.36
TRBV22OR9-2-201ENST00000441373 SOGA1O94964 1423 aa17.27■□□□□ 0.35
TRBV22OR9-2-201ENST00000441373 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
TRBV22OR9-2-201ENST00000441373 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
TRBV22OR9-2-201ENST00000441373 WDR97A6NE52 1622 aa17.24■□□□□ 0.35
TRBV22OR9-2-201ENST00000441373 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
TRBV22OR9-2-201ENST00000441373 EEA1Q15075 1411 aa17.21■□□□□ 0.34
TRBV22OR9-2-201ENST00000441373 RUSC2Q8N2Y8 1516 aa17.19■□□□□ 0.34
TRBV22OR9-2-201ENST00000441373 KIF27Q86VH2 1401 aa17.16■□□□□ 0.34
TRBV22OR9-2-201ENST00000441373 ABCA5Q8WWZ7 1642 aa17.14■□□□□ 0.33
TRBV22OR9-2-201ENST00000441373 IGF1RP08069 1367 aa17.1■□□□□ 0.33
TRBV22OR9-2-201ENST00000441373 CSRNP3Q8WYN3 585 aa17.09■□□□□ 0.33
TRBV22OR9-2-201ENST00000441373 TDRD9Q8NDG6 1382 aaKnown RBP17.09■□□□□ 0.33
TRBV22OR9-2-201ENST00000441373 ZNF608Q9ULD9 1512 aaPredicted RBP17.09■□□□□ 0.33
TRBV22OR9-2-201ENST00000441373 GAPVD1Q14C86 1478 aa17.08■□□□□ 0.32
TRBV22OR9-2-201ENST00000441373 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
TRBV22OR9-2-201ENST00000441373 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.32
TRBV22OR9-2-201ENST00000441373 PRXQ9BXM0 1461 aa17.04■□□□□ 0.32
TRBV22OR9-2-201ENST00000441373 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.32
TRBV22OR9-2-201ENST00000441373 FAM9AQ8IZU1 332 aaPredicted RBP17.02■□□□□ 0.32
TRBV22OR9-2-201ENST00000441373 GRIN2BQ13224 1484 aa17.01■□□□□ 0.31
TRBV22OR9-2-201ENST00000441373 PBRM1Q86U86 1689 aa16.99■□□□□ 0.31
TRBV22OR9-2-201ENST00000441373 KIF21BO75037 1637 aa16.99■□□□□ 0.31
TRBV22OR9-2-201ENST00000441373 CUL7Q14999 1698 aa16.97■□□□□ 0.31
TRBV22OR9-2-201ENST00000441373 CARMIL1Q5VZK9 1371 aa16.95■□□□□ 0.3
TRBV22OR9-2-201ENST00000441373 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
TRBV22OR9-2-201ENST00000441373 ADAMTS12P58397 1594 aa16.91■□□□□ 0.3
TRBV22OR9-2-201ENST00000441373 FHAD1B1AJZ9 1412 aa16.91■□□□□ 0.3
TRBV22OR9-2-201ENST00000441373 RAPGEF2Q9Y4G8 1499 aa16.91■□□□□ 0.3
TRBV22OR9-2-201ENST00000441373 LOC105371045A0A1W2PR82 267 aa16.89■□□□□ 0.29
TRBV22OR9-2-201ENST00000441373 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
TRBV22OR9-2-201ENST00000441373 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
TRBV22OR9-2-201ENST00000441373 SYNJ2O15056 1496 aa16.85■□□□□ 0.29
TRBV22OR9-2-201ENST00000441373 TNIKQ9UKE5 1360 aa16.82■□□□□ 0.28
TRBV22OR9-2-201ENST00000441373 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
TRBV22OR9-2-201ENST00000441373 NUP160Q12769 1436 aa16.74■□□□□ 0.27
TRBV22OR9-2-201ENST00000441373 UBTFP17480 764 aaKnown RBP16.73■□□□□ 0.27
TRBV22OR9-2-201ENST00000441373 CHMP7Q8WUX9 453 aaPredicted RBP16.73■□□□□ 0.27
TRBV22OR9-2-201ENST00000441373 CHD1O14646 1710 aa16.71■□□□□ 0.27
TRBV22OR9-2-201ENST00000441373 CTTNBP2Q8WZ74 1663 aa16.71■□□□□ 0.27
TRBV22OR9-2-201ENST00000441373 CEP170Q5SW79 1584 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms