RNA–Protein interactions for RNA: ENST00000440765.2

SIL1-203, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-203ENST00000440765 NISCHQ9Y2I1 1504 aa19.52■□□□□ 0.72
SIL1-203ENST00000440765 ABCC9O60706 1549 aa18.5■□□□□ 0.55
SIL1-203ENST00000440765 DNAJC5BQ9UF47 199 aa17.88■□□□□ 0.45
SIL1-203ENST00000440765 CCDC180Q9P1Z9 1646 aa17.82■□□□□ 0.44
SIL1-203ENST00000440765 RB1CC1Q8TDY2 1594 aa17.28■□□□□ 0.36
SIL1-203ENST00000440765 PABPN1Q86U42 306 aaKnown RBP eCLIP17.13■□□□□ 0.33
SIL1-203ENST00000440765 NACADO15069 1562 aa16.98■□□□□ 0.31
SIL1-203ENST00000440765 UNC13AQ9UPW8 1703 aa16.95■□□□□ 0.3
SIL1-203ENST00000440765 DCAF8L2P0C7V8 631 aa16.9■□□□□ 0.3
SIL1-203ENST00000440765 DNAJC5Q9H3Z4 198 aa16.87■□□□□ 0.29
SIL1-203ENST00000440765 BICRAQ9NZM4 1560 aa16.78■□□□□ 0.28
SIL1-203ENST00000440765 CECR2Q9BXF3 1484 aa16.71■□□□□ 0.27
SIL1-203ENST00000440765 CC2D2AQ9P2K1 1620 aa16.66■□□□□ 0.26
SIL1-203ENST00000440765 MYO15BQ96JP2 1530 aa16.45■□□□□ 0.22
SIL1-203ENST00000440765 EIF4G1Q04637 1599 aaKnown RBP16.45■□□□□ 0.22
SIL1-203ENST00000440765 SHROOM4Q9ULL8 1493 aa16.42■□□□□ 0.22
SIL1-203ENST00000440765 SCRIBQ14160 1630 aa16.27■□□□□ 0.2
SIL1-203ENST00000440765 CUX2O14529 1486 aa16.14■□□□□ 0.17
SIL1-203ENST00000440765 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
SIL1-203ENST00000440765 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
SIL1-203ENST00000440765 DCAF1Q9Y4B6 1507 aa16.02■□□□□ 0.15
SIL1-203ENST00000440765 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
SIL1-203ENST00000440765 NESP48681 1621 aa15.7■□□□□ 0.1
SIL1-203ENST00000440765 NCAPD3P42695 1498 aa15.65■□□□□ 0.1
SIL1-203ENST00000440765 THOC2Q8NI27 1593 aaKnown RBP15.65■□□□□ 0.1
SIL1-203ENST00000440765 SMARCA2P51531 1590 aa15.58■□□□□ 0.08
SIL1-203ENST00000440765 ATAD2BQ9ULI0 1458 aa15.54■□□□□ 0.08
SIL1-203ENST00000440765 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
SIL1-203ENST00000440765 HMGXB3Q12766 1538 aa15.49■□□□□ 0.07
SIL1-203ENST00000440765 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
SIL1-203ENST00000440765 BAZ1AQ9NRL2 1556 aaPredicted RBP15.41■□□□□ 0.06
SIL1-203ENST00000440765 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
SIL1-203ENST00000440765 SMARCA4P51532 1647 aa15.4■□□□□ 0.06
SIL1-203ENST00000440765 PDS5BQ9NTI5 1447 aa15.37■□□□□ 0.05
SIL1-203ENST00000440765 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
SIL1-203ENST00000440765 MRC2Q9UBG0 1479 aa15.3■□□□□ 0.04
SIL1-203ENST00000440765 WDR62O43379 1518 aa15.27■□□□□ 0.03
SIL1-203ENST00000440765 RIMBP3CA6NJZ7 1639 aa15.23■□□□□ 0.03
SIL1-203ENST00000440765 RIMBP3BA6NNM3 1639 aa15.23■□□□□ 0.03
SIL1-203ENST00000440765 RIMBP3Q9UFD9 1639 aa15.23■□□□□ 0.03
SIL1-203ENST00000440765 PEG3Q9GZU2 1588 aa15.19■□□□□ 0.02
SIL1-203ENST00000440765 AEBP2Q6ZN18 517 aaPredicted RBP15.18■□□□□ 0.02
SIL1-203ENST00000440765 CADPSQ9ULU8 1353 aa15.17■□□□□ 0.02
SIL1-203ENST00000440765 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
SIL1-203ENST00000440765 CEP164Q9UPV0 1460 aa15.12■□□□□ 0.01
SIL1-203ENST00000440765 ARHGEF11O15085 1522 aa15.09■□□□□ 0.01
SIL1-203ENST00000440765 MROH2BQ7Z745 1585 aa15.07■□□□□ 0
SIL1-203ENST00000440765 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
SIL1-203ENST00000440765 FANCD2Q9BXW9 1451 aa15.03■□□□□ -0
SIL1-203ENST00000440765 URB2Q14146 1524 aaKnown RBP14.94□□□□□ -0.02
SIL1-203ENST00000440765 WIZO95785 1651 aa14.9□□□□□ -0.02
SIL1-203ENST00000440765 ARAP1Q96P48 1450 aa14.89□□□□□ -0.03
SIL1-203ENST00000440765 ZNF608Q9ULD9 1512 aaPredicted RBP14.88□□□□□ -0.03
SIL1-203ENST00000440765 CFTRP13569 1480 aa14.85□□□□□ -0.03
SIL1-203ENST00000440765 CHD1O14646 1710 aa14.84□□□□□ -0.03
SIL1-203ENST00000440765 IFT140Q96RY7 1462 aa14.82□□□□□ -0.04
SIL1-203ENST00000440765 EIF4G3O43432 1585 aaKnown RBP14.79□□□□□ -0.04
SIL1-203ENST00000440765 FBLN2P98095 1184 aa14.78□□□□□ -0.04
SIL1-203ENST00000440765 RSF1Q96T23 1441 aaPredicted RBP14.75□□□□□ -0.05
SIL1-203ENST00000440765 PRDM2Q13029 1718 aa14.74□□□□□ -0.05
SIL1-203ENST00000440765 AQRO60306 1485 aaKnown RBP eCLIP14.68□□□□□ -0.06
SIL1-203ENST00000440765 TOPBP1Q92547 1522 aa14.67□□□□□ -0.06
SIL1-203ENST00000440765 TOP2AP11388 1531 aaKnown RBP14.61□□□□□ -0.07
SIL1-203ENST00000440765 TARBP1Q13395 1621 aaKnown RBP14.59□□□□□ -0.07
SIL1-203ENST00000440765 ILDR1Q86SU0 546 aaPredicted RBP14.58□□□□□ -0.08
SIL1-203ENST00000440765 CLASP1Q7Z460 1538 aa14.57□□□□□ -0.08
SIL1-203ENST00000440765 DNMBPQ6XZF7 1577 aa14.56□□□□□ -0.08
SIL1-203ENST00000440765 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
SIL1-203ENST00000440765 SYNJ1O43426 1573 aa14.53□□□□□ -0.08
SIL1-203ENST00000440765 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
SIL1-203ENST00000440765 CHMP7Q8WUX9 453 aaPredicted RBP14.5□□□□□ -0.09
SIL1-203ENST00000440765 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
SIL1-203ENST00000440765 TDRD9Q8NDG6 1382 aaKnown RBP14.48□□□□□ -0.09
SIL1-203ENST00000440765 POLA1P09884 1462 aaPredicted RBP14.48□□□□□ -0.09
SIL1-203ENST00000440765 RAD54L2Q9Y4B4 1467 aa14.47□□□□□ -0.09
SIL1-203ENST00000440765 CCDC88BA6NC98 1476 aa14.46□□□□□ -0.09
SIL1-203ENST00000440765 SOGA1O94964 1423 aa14.41□□□□□ -0.1
SIL1-203ENST00000440765 MAGI1Q96QZ7 1491 aaPredicted RBP14.4□□□□□ -0.1
SIL1-203ENST00000440765 SYNJ2O15056 1496 aa14.38□□□□□ -0.11
SIL1-203ENST00000440765 KIF13AQ9H1H9 1805 aa14.38□□□□□ -0.11
SIL1-203ENST00000440765 ERCC6L2Q5T890 1561 aa14.35□□□□□ -0.11
SIL1-203ENST00000440765 WDR97A6NE52 1622 aa14.35□□□□□ -0.11
SIL1-203ENST00000440765 GRIN2BQ13224 1484 aa14.35□□□□□ -0.11
SIL1-203ENST00000440765 FGD5Q6ZNL6 1462 aa14.32□□□□□ -0.12
SIL1-203ENST00000440765 KDM4FA0A1W2PPD8 638 aa14.32□□□□□ -0.12
SIL1-203ENST00000440765 PBRM1Q86U86 1689 aa14.31□□□□□ -0.12
SIL1-203ENST00000440765 CEP170Q5SW79 1584 aa14.24□□□□□ -0.13
SIL1-203ENST00000440765 FAM69CQ0P6D2 419 aa14.23□□□□□ -0.13
SIL1-203ENST00000440765 KDM6BO15054 1643 aa14.22□□□□□ -0.13
SIL1-203ENST00000440765 CUX1P39880 1505 aa14.18□□□□□ -0.14
SIL1-203ENST00000440765 TSPOAP1O95153 1857 aa14.17□□□□□ -0.14
SIL1-203ENST00000440765 GRIN2AQ12879 1464 aa14.17□□□□□ -0.14
SIL1-203ENST00000440765 ABCC10Q5T3U5 1492 aa14.15□□□□□ -0.14
SIL1-203ENST00000440765 SHROOM2Q13796 1616 aa14.15□□□□□ -0.14
SIL1-203ENST00000440765 ABCA5Q8WWZ7 1642 aa14.15□□□□□ -0.14
SIL1-203ENST00000440765 DIP2BQ9P265 1576 aa14.13□□□□□ -0.15
SIL1-203ENST00000440765 NPM1P06748 294 aaKnown RBP eCLIP14.12□□□□□ -0.15
SIL1-203ENST00000440765 NUP160Q12769 1436 aa14.11□□□□□ -0.15
SIL1-203ENST00000440765 HECW2Q9P2P5 1572 aa14.1□□□□□ -0.15
SIL1-203ENST00000440765 ADAMTS12P58397 1594 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms