RNA–Protein interactions for RNA: ENST00000440441.5

HERC2P3-210, Transcript of hect domain and RLD 2 pseudogene 3, humanhuman

TSL 4

Gene HERC2P3, Length 781 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3-210ENST00000440441 NISCHQ9Y2I1 1504 aa23.37■■□□□ 1.33
HERC2P3-210ENST00000440441 ABCC9O60706 1549 aa21.17■□□□□ 0.98
HERC2P3-210ENST00000440441 CCDC180Q9P1Z9 1646 aa20.93■□□□□ 0.94
HERC2P3-210ENST00000440441 RB1CC1Q8TDY2 1594 aa20.04■□□□□ 0.8
HERC2P3-210ENST00000440441 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
HERC2P3-210ENST00000440441 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
HERC2P3-210ENST00000440441 NACADO15069 1562 aa19.87■□□□□ 0.77
HERC2P3-210ENST00000440441 PABPN1Q86U42 306 aaKnown RBP eCLIP19.74■□□□□ 0.75
HERC2P3-210ENST00000440441 MYO15BQ96JP2 1530 aa19.52■□□□□ 0.72
HERC2P3-210ENST00000440441 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
HERC2P3-210ENST00000440441 BICRAQ9NZM4 1560 aa19.44■□□□□ 0.7
HERC2P3-210ENST00000440441 AEBP2Q6ZN18 517 aaPredicted RBP19.35■□□□□ 0.69
HERC2P3-210ENST00000440441 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
HERC2P3-210ENST00000440441 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
HERC2P3-210ENST00000440441 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
HERC2P3-210ENST00000440441 SHROOM4Q9ULL8 1493 aa19.15■□□□□ 0.66
HERC2P3-210ENST00000440441 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
HERC2P3-210ENST00000440441 CC2D2AQ9P2K1 1620 aa19.06■□□□□ 0.64
HERC2P3-210ENST00000440441 EIF4G1Q04637 1599 aaKnown RBP18.99■□□□□ 0.63
HERC2P3-210ENST00000440441 DNAJC5Q9H3Z4 198 aa18.37■□□□□ 0.53
HERC2P3-210ENST00000440441 NCAPD3P42695 1498 aa18.36■□□□□ 0.53
HERC2P3-210ENST00000440441 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
HERC2P3-210ENST00000440441 CHIC1Q5VXU3 224 aa18.3■□□□□ 0.52
HERC2P3-210ENST00000440441 ERCC6Q03468 1493 aa18.3■□□□□ 0.52
HERC2P3-210ENST00000440441 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
HERC2P3-210ENST00000440441 SMARCA2P51531 1590 aa18.23■□□□□ 0.51
HERC2P3-210ENST00000440441 CUX2O14529 1486 aa18.23■□□□□ 0.51
HERC2P3-210ENST00000440441 HMGXB3Q12766 1538 aa18.19■□□□□ 0.5
HERC2P3-210ENST00000440441 BAZ1BQ9UIG0 1483 aaKnown RBP18.14■□□□□ 0.5
HERC2P3-210ENST00000440441 BAZ1AQ9NRL2 1556 aaPredicted RBP18.14■□□□□ 0.49
HERC2P3-210ENST00000440441 NESP48681 1621 aa18.14■□□□□ 0.49
HERC2P3-210ENST00000440441 PEG3Q9GZU2 1588 aa18.03■□□□□ 0.48
HERC2P3-210ENST00000440441 MROH2BQ7Z745 1585 aa18.02■□□□□ 0.48
HERC2P3-210ENST00000440441 LAMC3Q9Y6N6 1575 aa17.94■□□□□ 0.46
HERC2P3-210ENST00000440441 THOC2Q8NI27 1593 aaKnown RBP17.91■□□□□ 0.46
HERC2P3-210ENST00000440441 PDS5BQ9NTI5 1447 aa17.89■□□□□ 0.46
HERC2P3-210ENST00000440441 KIF21AQ7Z4S6 1674 aa17.84■□□□□ 0.45
HERC2P3-210ENST00000440441 CADPSQ9ULU8 1353 aa17.83■□□□□ 0.45
HERC2P3-210ENST00000440441 WIZO95785 1651 aa17.78■□□□□ 0.44
HERC2P3-210ENST00000440441 MRC2Q9UBG0 1479 aa17.73■□□□□ 0.43
HERC2P3-210ENST00000440441 WDR62O43379 1518 aa17.66■□□□□ 0.42
HERC2P3-210ENST00000440441 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
HERC2P3-210ENST00000440441 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
HERC2P3-210ENST00000440441 RSF1Q96T23 1441 aaPredicted RBP17.63■□□□□ 0.41
HERC2P3-210ENST00000440441 TRIM41Q8WV44 630 aa17.61■□□□□ 0.41
HERC2P3-210ENST00000440441 CFTRP13569 1480 aa17.58■□□□□ 0.41
HERC2P3-210ENST00000440441 TOP2AP11388 1531 aaKnown RBP17.55■□□□□ 0.4
HERC2P3-210ENST00000440441 URB2Q14146 1524 aaKnown RBP17.47■□□□□ 0.39
HERC2P3-210ENST00000440441 OSCARQ8IYS5 282 aa17.44■□□□□ 0.38
HERC2P3-210ENST00000440441 CCDC88BA6NC98 1476 aa17.38■□□□□ 0.37
HERC2P3-210ENST00000440441 ZNF608Q9ULD9 1512 aaPredicted RBP17.3■□□□□ 0.36
HERC2P3-210ENST00000440441 IFT140Q96RY7 1462 aa17.3■□□□□ 0.36
HERC2P3-210ENST00000440441 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
HERC2P3-210ENST00000440441 TOPBP1Q92547 1522 aa17.27■□□□□ 0.36
HERC2P3-210ENST00000440441 ABCC8Q09428 1581 aa17.2■□□□□ 0.34
HERC2P3-210ENST00000440441 DNMBPQ6XZF7 1577 aa17.18■□□□□ 0.34
HERC2P3-210ENST00000440441 RIMBP3CA6NJZ7 1639 aa17.17■□□□□ 0.34
HERC2P3-210ENST00000440441 RIMBP3BA6NNM3 1639 aa17.17■□□□□ 0.34
HERC2P3-210ENST00000440441 RIMBP3Q9UFD9 1639 aa17.17■□□□□ 0.34
HERC2P3-210ENST00000440441 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
HERC2P3-210ENST00000440441 AQRO60306 1485 aaKnown RBP eCLIP17.14■□□□□ 0.33
HERC2P3-210ENST00000440441 ARHGEF11O15085 1522 aa17.12■□□□□ 0.33
HERC2P3-210ENST00000440441 FBLN2P98095 1184 aa17.12■□□□□ 0.33
HERC2P3-210ENST00000440441 POLA1P09884 1462 aaPredicted RBP17.09■□□□□ 0.33
HERC2P3-210ENST00000440441 TARBP1Q13395 1621 aaKnown RBP17.08■□□□□ 0.32
HERC2P3-210ENST00000440441 CYB5RLQ6IPT4 315 aa17.08■□□□□ 0.32
HERC2P3-210ENST00000440441 RAD54L2Q9Y4B4 1467 aa17.06■□□□□ 0.32
HERC2P3-210ENST00000440441 TDRD9Q8NDG6 1382 aaKnown RBP17.04■□□□□ 0.32
HERC2P3-210ENST00000440441 SOGA1O94964 1423 aa17.04■□□□□ 0.32
HERC2P3-210ENST00000440441 CHD1O14646 1710 aa17.02■□□□□ 0.32
HERC2P3-210ENST00000440441 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
HERC2P3-210ENST00000440441 SNAPC4Q5SXM2 1469 aa16.95■□□□□ 0.3
HERC2P3-210ENST00000440441 ARAP1Q96P48 1450 aa16.95■□□□□ 0.3
HERC2P3-210ENST00000440441 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
HERC2P3-210ENST00000440441 CHMP7Q8WUX9 453 aaPredicted RBP16.94■□□□□ 0.3
HERC2P3-210ENST00000440441 CUX1P39880 1505 aa16.93■□□□□ 0.3
HERC2P3-210ENST00000440441 GRIN2BQ13224 1484 aa16.88■□□□□ 0.29
HERC2P3-210ENST00000440441 WDR97A6NE52 1622 aa16.88■□□□□ 0.29
HERC2P3-210ENST00000440441 MAGI1Q96QZ7 1491 aaPredicted RBP16.87■□□□□ 0.29
HERC2P3-210ENST00000440441 SUPT5HO00267 1087 aaKnown RBP16.87■□□□□ 0.29
HERC2P3-210ENST00000440441 CLASP1Q7Z460 1538 aa16.84■□□□□ 0.29
HERC2P3-210ENST00000440441 SYNJ1O43426 1573 aa16.84■□□□□ 0.29
HERC2P3-210ENST00000440441 SYNJ2O15056 1496 aa16.83■□□□□ 0.28
HERC2P3-210ENST00000440441 GAPVD1Q14C86 1478 aa16.81■□□□□ 0.28
HERC2P3-210ENST00000440441 ABCA10Q8WWZ4 1543 aa16.76■□□□□ 0.27
HERC2P3-210ENST00000440441 PBRM1Q86U86 1689 aa16.75■□□□□ 0.27
HERC2P3-210ENST00000440441 WRNQ14191 1432 aaPredicted RBP eCLIP16.71■□□□□ 0.27
HERC2P3-210ENST00000440441 ABCA5Q8WWZ7 1642 aa16.71■□□□□ 0.27
HERC2P3-210ENST00000440441 GRIN2AQ12879 1464 aa16.66■□□□□ 0.26
HERC2P3-210ENST00000440441 ADAMTS12P58397 1594 aa16.61■□□□□ 0.25
HERC2P3-210ENST00000440441 TOP2BQ02880 1626 aa16.61■□□□□ 0.25
HERC2P3-210ENST00000440441 ERCC6L2Q5T890 1561 aa16.6■□□□□ 0.25
HERC2P3-210ENST00000440441 FHAD1B1AJZ9 1412 aa16.6■□□□□ 0.25
HERC2P3-210ENST00000440441 NUP160Q12769 1436 aa16.6■□□□□ 0.25
HERC2P3-210ENST00000440441 CEP170Q5SW79 1584 aa16.59■□□□□ 0.25
HERC2P3-210ENST00000440441 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
HERC2P3-210ENST00000440441 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
HERC2P3-210ENST00000440441 PRG4Q92954 1404 aaPredicted RBP16.49■□□□□ 0.23
HERC2P3-210ENST00000440441 SHROOM2Q13796 1616 aa16.48■□□□□ 0.23
HERC2P3-210ENST00000440441 JPH4Q96JJ6 628 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms