RNA–Protein interactions for RNA: ENST00000440404.5

LINC01142-201, Transcript of long intergenic non-protein coding RNA 1142, humanhuman

TSL 1 (best) BASIC

Gene LINC01142, Length 1,457 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01142-201ENST00000440404 NISCHQ9Y2I1 1504 aa19.46■□□□□ 0.71
LINC01142-201ENST00000440404 CCDC180Q9P1Z9 1646 aa17.6■□□□□ 0.41
LINC01142-201ENST00000440404 ABCC9O60706 1549 aa17.45■□□□□ 0.38
LINC01142-201ENST00000440404 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
LINC01142-201ENST00000440404 NACADO15069 1562 aa16.59■□□□□ 0.25
LINC01142-201ENST00000440404 MYO15BQ96JP2 1530 aa16.37■□□□□ 0.21
LINC01142-201ENST00000440404 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
LINC01142-201ENST00000440404 UNC13AQ9UPW8 1703 aa16.34■□□□□ 0.21
LINC01142-201ENST00000440404 DNAJC5BQ9UF47 199 aa16.24■□□□□ 0.19
LINC01142-201ENST00000440404 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
LINC01142-201ENST00000440404 ZCCHC6Q5VYS8 1495 aaKnown RBP16.14■□□□□ 0.17
LINC01142-201ENST00000440404 DCAF1Q9Y4B6 1507 aa16.13■□□□□ 0.17
LINC01142-201ENST00000440404 BICRAQ9NZM4 1560 aa16.13■□□□□ 0.17
LINC01142-201ENST00000440404 SHROOM4Q9ULL8 1493 aa16.06■□□□□ 0.16
LINC01142-201ENST00000440404 AEBP2Q6ZN18 517 aaPredicted RBP16.04■□□□□ 0.16
LINC01142-201ENST00000440404 SCRIBQ14160 1630 aa15.94■□□□□ 0.14
LINC01142-201ENST00000440404 CC2D2AQ9P2K1 1620 aa15.82■□□□□ 0.12
LINC01142-201ENST00000440404 EIF4G1Q04637 1599 aaKnown RBP15.79■□□□□ 0.12
LINC01142-201ENST00000440404 CECR2Q9BXF3 1484 aa15.76■□□□□ 0.11
LINC01142-201ENST00000440404 CHIC1Q5VXU3 224 aa15.31■□□□□ 0.04
LINC01142-201ENST00000440404 NCAPD3P42695 1498 aa15.25■□□□□ 0.03
LINC01142-201ENST00000440404 SMARCA2P51531 1590 aa15.23■□□□□ 0.03
LINC01142-201ENST00000440404 SMARCA4P51532 1647 aa15.23■□□□□ 0.03
LINC01142-201ENST00000440404 HMGXB3Q12766 1538 aa15.21■□□□□ 0.02
LINC01142-201ENST00000440404 ATAD2BQ9ULI0 1458 aa15.18■□□□□ 0.02
LINC01142-201ENST00000440404 BAZ1AQ9NRL2 1556 aaPredicted RBP15.17■□□□□ 0.02
LINC01142-201ENST00000440404 ERCC6Q03468 1493 aa15.15■□□□□ 0.02
LINC01142-201ENST00000440404 CUX2O14529 1486 aa15.13■□□□□ 0.01
LINC01142-201ENST00000440404 PEG3Q9GZU2 1588 aa15.09■□□□□ 0.01
LINC01142-201ENST00000440404 BAZ1BQ9UIG0 1483 aaKnown RBP15.09■□□□□ 0.01
LINC01142-201ENST00000440404 DNAJC5Q9H3Z4 198 aa15.02■□□□□ -0
LINC01142-201ENST00000440404 LAMC3Q9Y6N6 1575 aa14.98□□□□□ -0.01
LINC01142-201ENST00000440404 NESP48681 1621 aa14.95□□□□□ -0.02
LINC01142-201ENST00000440404 MROH2BQ7Z745 1585 aa14.95□□□□□ -0.02
LINC01142-201ENST00000440404 THOC2Q8NI27 1593 aaKnown RBP14.9□□□□□ -0.02
LINC01142-201ENST00000440404 KIF21AQ7Z4S6 1674 aa14.88□□□□□ -0.03
LINC01142-201ENST00000440404 PDS5BQ9NTI5 1447 aa14.87□□□□□ -0.03
LINC01142-201ENST00000440404 WIZO95785 1651 aa14.81□□□□□ -0.04
LINC01142-201ENST00000440404 CADPSQ9ULU8 1353 aa14.77□□□□□ -0.04
LINC01142-201ENST00000440404 MRC2Q9UBG0 1479 aa14.73□□□□□ -0.05
LINC01142-201ENST00000440404 WDR62O43379 1518 aa14.7□□□□□ -0.06
LINC01142-201ENST00000440404 CEP164Q9UPV0 1460 aa14.68□□□□□ -0.06
LINC01142-201ENST00000440404 TOP2AP11388 1531 aaKnown RBP14.66□□□□□ -0.06
LINC01142-201ENST00000440404 RSF1Q96T23 1441 aaPredicted RBP14.63□□□□□ -0.07
LINC01142-201ENST00000440404 PRDM2Q13029 1718 aa14.63□□□□□ -0.07
LINC01142-201ENST00000440404 FANCD2Q9BXW9 1451 aa14.62□□□□□ -0.07
LINC01142-201ENST00000440404 CFTRP13569 1480 aa14.62□□□□□ -0.07
LINC01142-201ENST00000440404 URB2Q14146 1524 aaKnown RBP14.48□□□□□ -0.09
LINC01142-201ENST00000440404 CCDC88BA6NC98 1476 aa14.43□□□□□ -0.1
LINC01142-201ENST00000440404 ABCC8Q09428 1581 aa14.39□□□□□ -0.11
LINC01142-201ENST00000440404 IFT140Q96RY7 1462 aa14.38□□□□□ -0.11
LINC01142-201ENST00000440404 OSCARQ8IYS5 282 aa14.38□□□□□ -0.11
LINC01142-201ENST00000440404 TRIM41Q8WV44 630 aa14.36□□□□□ -0.11
LINC01142-201ENST00000440404 TOPBP1Q92547 1522 aa14.35□□□□□ -0.11
LINC01142-201ENST00000440404 DNMBPQ6XZF7 1577 aa14.34□□□□□ -0.11
LINC01142-201ENST00000440404 EIF4G3O43432 1585 aaKnown RBP14.3□□□□□ -0.12
LINC01142-201ENST00000440404 ZNF608Q9ULD9 1512 aaPredicted RBP14.27□□□□□ -0.12
LINC01142-201ENST00000440404 TARBP1Q13395 1621 aaKnown RBP14.23□□□□□ -0.13
LINC01142-201ENST00000440404 RIMBP3CA6NJZ7 1639 aa14.22□□□□□ -0.13
LINC01142-201ENST00000440404 RIMBP3BA6NNM3 1639 aa14.22□□□□□ -0.13
LINC01142-201ENST00000440404 RIMBP3Q9UFD9 1639 aa14.22□□□□□ -0.13
LINC01142-201ENST00000440404 CHD1O14646 1710 aa14.21□□□□□ -0.13
LINC01142-201ENST00000440404 WDR97A6NE52 1622 aa14.2□□□□□ -0.14
LINC01142-201ENST00000440404 POLA1P09884 1462 aaPredicted RBP14.19□□□□□ -0.14
LINC01142-201ENST00000440404 ARHGEF11O15085 1522 aa14.16□□□□□ -0.14
LINC01142-201ENST00000440404 AQRO60306 1485 aaKnown RBP eCLIP14.14□□□□□ -0.15
LINC01142-201ENST00000440404 SOGA1O94964 1423 aa14.11□□□□□ -0.15
LINC01142-201ENST00000440404 FGD5Q6ZNL6 1462 aa14.11□□□□□ -0.15
LINC01142-201ENST00000440404 RAD54L2Q9Y4B4 1467 aa14.09□□□□□ -0.15
LINC01142-201ENST00000440404 FBLN2P98095 1184 aa14.07□□□□□ -0.16
LINC01142-201ENST00000440404 CUX1P39880 1505 aa14.07□□□□□ -0.16
LINC01142-201ENST00000440404 MAGI1Q96QZ7 1491 aaPredicted RBP14.07□□□□□ -0.16
LINC01142-201ENST00000440404 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
LINC01142-201ENST00000440404 TDRD9Q8NDG6 1382 aaKnown RBP14.05□□□□□ -0.16
LINC01142-201ENST00000440404 SNAPC4Q5SXM2 1469 aa14.05□□□□□ -0.16
LINC01142-201ENST00000440404 PBRM1Q86U86 1689 aa14.04□□□□□ -0.16
LINC01142-201ENST00000440404 GRIN2BQ13224 1484 aa14.03□□□□□ -0.16
LINC01142-201ENST00000440404 SYNJ2O15056 1496 aa14□□□□□ -0.17
LINC01142-201ENST00000440404 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
LINC01142-201ENST00000440404 ARAP1Q96P48 1450 aa14□□□□□ -0.17
LINC01142-201ENST00000440404 CYB5RLQ6IPT4 315 aa13.99□□□□□ -0.17
LINC01142-201ENST00000440404 CHMP7Q8WUX9 453 aaPredicted RBP13.99□□□□□ -0.17
LINC01142-201ENST00000440404 GAPVD1Q14C86 1478 aa13.97□□□□□ -0.17
LINC01142-201ENST00000440404 ABCA5Q8WWZ7 1642 aa13.96□□□□□ -0.17
LINC01142-201ENST00000440404 ABCA10Q8WWZ4 1543 aa13.96□□□□□ -0.17
LINC01142-201ENST00000440404 SUPT5HO00267 1087 aaKnown RBP13.94□□□□□ -0.18
LINC01142-201ENST00000440404 BIVM-ERCC5R4GMW8 1640 aa13.92□□□□□ -0.18
LINC01142-201ENST00000440404 WRNQ14191 1432 aaPredicted RBP eCLIP13.91□□□□□ -0.18
LINC01142-201ENST00000440404 TOP2BQ02880 1626 aa13.9□□□□□ -0.18
LINC01142-201ENST00000440404 TRHP20396 242 aaPredicted RBP13.88□□□□□ -0.19
LINC01142-201ENST00000440404 ADAMTS12P58397 1594 aa13.86□□□□□ -0.19
LINC01142-201ENST00000440404 GRIN2AQ12879 1464 aa13.85□□□□□ -0.19
LINC01142-201ENST00000440404 ERICH3Q5RHP9 1530 aa13.83□□□□□ -0.2
LINC01142-201ENST00000440404 FHAD1B1AJZ9 1412 aa13.8□□□□□ -0.2
LINC01142-201ENST00000440404 NUP160Q12769 1436 aa13.78□□□□□ -0.2
LINC01142-201ENST00000440404 CEP170Q5SW79 1584 aa13.78□□□□□ -0.2
LINC01142-201ENST00000440404 SHROOM2Q13796 1616 aa13.77□□□□□ -0.21
LINC01142-201ENST00000440404 SENP3Q9H4L4 574 aaPredicted RBP13.75□□□□□ -0.21
LINC01142-201ENST00000440404 ERCC6L2Q5T890 1561 aa13.71□□□□□ -0.21
LINC01142-201ENST00000440404 RUSC2Q8N2Y8 1516 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms