RNA–Protein interactions for RNA: ENST00000439603.5

LONRF3-204, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best)

Gene LONRF3, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-204ENST00000439603 NISCHQ9Y2I1 1504 aa54.28■■■■■ 6.28
LONRF3-204ENST00000439603 CCDC180Q9P1Z9 1646 aa47.65■■■■■ 5.22
LONRF3-204ENST00000439603 ABCC9O60706 1549 aa45.65■■■■■ 4.9
LONRF3-204ENST00000439603 ZCCHC6Q5VYS8 1495 aaKnown RBP45.45■■■■■ 4.87
LONRF3-204ENST00000439603 DCAF8L2P0C7V8 631 aa45.03■■■■■ 4.8
LONRF3-204ENST00000439603 DCAF1Q9Y4B6 1507 aa44.91■■■■■ 4.78
LONRF3-204ENST00000439603 MYO15BQ96JP2 1530 aa44.66■■■■■ 4.74
LONRF3-204ENST00000439603 NACADO15069 1562 aa44.57■■■■■ 4.73
LONRF3-204ENST00000439603 RB1CC1Q8TDY2 1594 aa44.34■■■■■ 4.69
LONRF3-204ENST00000439603 SHROOM4Q9ULL8 1493 aa43.71■■■■■ 4.59
LONRF3-204ENST00000439603 SCRIBQ14160 1630 aa43.67■■■■■ 4.58
LONRF3-204ENST00000439603 UNC13AQ9UPW8 1703 aa43.35■■■■■ 4.53
LONRF3-204ENST00000439603 BICRAQ9NZM4 1560 aa42.98■■■■■ 4.47
LONRF3-204ENST00000439603 PABPN1Q86U42 306 aaKnown RBP eCLIP42.91■■■■■ 4.46
LONRF3-204ENST00000439603 CECR2Q9BXF3 1484 aa42.2■■■■■ 4.35
LONRF3-204ENST00000439603 BAZ1AQ9NRL2 1556 aaPredicted RBP41.97■■■■■ 4.31
LONRF3-204ENST00000439603 MROH2BQ7Z745 1585 aa41.87■■■■■ 4.29
LONRF3-204ENST00000439603 SMARCA4P51532 1647 aa41.85■■■■■ 4.29
LONRF3-204ENST00000439603 RSF1Q96T23 1441 aaPredicted RBP41.83■■■■■ 4.29
LONRF3-204ENST00000439603 EIF4G1Q04637 1599 aaKnown RBP41.75■■■■■ 4.27
LONRF3-204ENST00000439603 SUPT5HO00267 1087 aaKnown RBP41.75■■■■■ 4.27
LONRF3-204ENST00000439603 WIZO95785 1651 aa41.48■■■■■ 4.23
LONRF3-204ENST00000439603 PEG3Q9GZU2 1588 aa41.4■■■■■ 4.22
LONRF3-204ENST00000439603 ATAD2BQ9ULI0 1458 aa41.36■■■■■ 4.21
LONRF3-204ENST00000439603 SMARCA2P51531 1590 aa41.32■■■■■ 4.21
LONRF3-204ENST00000439603 CC2D2AQ9P2K1 1620 aa41.3■■■■■ 4.2
LONRF3-204ENST00000439603 NCAPD3P42695 1498 aa41.15■■■■■ 4.18
LONRF3-204ENST00000439603 BAZ1BQ9UIG0 1483 aaKnown RBP41.08■■■■■ 4.17
LONRF3-204ENST00000439603 TOP2AP11388 1531 aaKnown RBP41.07■■■■■ 4.17
LONRF3-204ENST00000439603 HMGXB3Q12766 1538 aa41.01■■■■■ 4.16
LONRF3-204ENST00000439603 DNAJC5BQ9UF47 199 aa40.9■■■■■ 4.14
LONRF3-204ENST00000439603 CCDC88BA6NC98 1476 aa40.64■■■■■ 4.1
LONRF3-204ENST00000439603 CADPSQ9ULU8 1353 aa40.04■■■■■ 4
LONRF3-204ENST00000439603 CFTRP13569 1480 aa40.02■■■■■ 4
LONRF3-204ENST00000439603 LAMC3Q9Y6N6 1575 aa39.85■■■■□ 3.97
LONRF3-204ENST00000439603 NESP48681 1621 aa39.84■■■■□ 3.97
LONRF3-204ENST00000439603 PRDM2Q13029 1718 aa39.73■■■■□ 3.95
LONRF3-204ENST00000439603 CHIC1Q5VXU3 224 aa39.62■■■■□ 3.93
LONRF3-204ENST00000439603 PDS5BQ9NTI5 1447 aa39.58■■■■□ 3.93
LONRF3-204ENST00000439603 FANCD2Q9BXW9 1451 aa39.57■■■■□ 3.93
LONRF3-204ENST00000439603 ABCC8Q09428 1581 aa39.52■■■■□ 3.92
LONRF3-204ENST00000439603 WRNQ14191 1432 aaPredicted RBP eCLIP39.41■■■■□ 3.9
LONRF3-204ENST00000439603 CEP164Q9UPV0 1460 aa39.39■■■■□ 3.9
LONRF3-204ENST00000439603 TRIM41Q8WV44 630 aa39.35■■■■□ 3.89
LONRF3-204ENST00000439603 KIF21AQ7Z4S6 1674 aa39.35■■■■□ 3.89
LONRF3-204ENST00000439603 ERCC6Q03468 1493 aa39.24■■■■□ 3.87
LONRF3-204ENST00000439603 SYNJ1O43426 1573 aa39.23■■■■□ 3.87
LONRF3-204ENST00000439603 CUX1P39880 1505 aa39.2■■■■□ 3.87
LONRF3-204ENST00000439603 TOP2BQ02880 1626 aa39.15■■■■□ 3.86
LONRF3-204ENST00000439603 BIVM-ERCC5R4GMW8 1640 aa39.11■■■■□ 3.85
LONRF3-204ENST00000439603 URB2Q14146 1524 aaKnown RBP39.1■■■■□ 3.85
LONRF3-204ENST00000439603 DNMBPQ6XZF7 1577 aa39.08■■■■□ 3.85
LONRF3-204ENST00000439603 MRC2Q9UBG0 1479 aa39.08■■■■□ 3.85
LONRF3-204ENST00000439603 TOPBP1Q92547 1522 aa39.06■■■■□ 3.84
LONRF3-204ENST00000439603 THOC2Q8NI27 1593 aaKnown RBP38.91■■■■□ 3.82
LONRF3-204ENST00000439603 WDR62O43379 1518 aa38.9■■■■□ 3.82
LONRF3-204ENST00000439603 FGD5Q6ZNL6 1462 aa38.89■■■■□ 3.82
LONRF3-204ENST00000439603 POLA1P09884 1462 aaPredicted RBP38.81■■■■□ 3.8
LONRF3-204ENST00000439603 SOGA1O94964 1423 aa38.71■■■■□ 3.79
LONRF3-204ENST00000439603 RAD54L2Q9Y4B4 1467 aa38.67■■■■□ 3.78
LONRF3-204ENST00000439603 CUX2O14529 1486 aa38.61■■■■□ 3.77
LONRF3-204ENST00000439603 ABCA10Q8WWZ4 1543 aa38.56■■■■□ 3.76
LONRF3-204ENST00000439603 FAM9AQ8IZU1 332 aaPredicted RBP38.55■■■■□ 3.76
LONRF3-204ENST00000439603 RUSC2Q8N2Y8 1516 aa38.55■■■■□ 3.76
LONRF3-204ENST00000439603 TARBP1Q13395 1621 aaKnown RBP38.52■■■■□ 3.76
LONRF3-204ENST00000439603 IFT140Q96RY7 1462 aa38.51■■■■□ 3.76
LONRF3-204ENST00000439603 EEA1Q15075 1411 aa38.49■■■■□ 3.75
LONRF3-204ENST00000439603 KIF27Q86VH2 1401 aa38.48■■■■□ 3.75
LONRF3-204ENST00000439603 WDR97A6NE52 1622 aa38.45■■■■□ 3.75
LONRF3-204ENST00000439603 TDRD9Q8NDG6 1382 aaKnown RBP38.37■■■■□ 3.73
LONRF3-204ENST00000439603 CSRNP3Q8WYN3 585 aa38.35■■■■□ 3.73
LONRF3-204ENST00000439603 ZNF608Q9ULD9 1512 aaPredicted RBP38.28■■■■□ 3.72
LONRF3-204ENST00000439603 ABCA5Q8WWZ7 1642 aa38.27■■■■□ 3.72
LONRF3-204ENST00000439603 GAPVD1Q14C86 1478 aa38.25■■■■□ 3.71
LONRF3-204ENST00000439603 AQRO60306 1485 aaKnown RBP eCLIP38.24■■■■□ 3.713e-9■■■■□ 21.5
LONRF3-204ENST00000439603 IGF1RP08069 1367 aa38.21■■■■□ 3.71
LONRF3-204ENST00000439603 EIF4G3O43432 1585 aaKnown RBP38.13■■■■□ 3.69
LONRF3-204ENST00000439603 ERICH3Q5RHP9 1530 aa38.1■■■■□ 3.69
LONRF3-204ENST00000439603 GRIN2BQ13224 1484 aa38.07■■■■□ 3.69
LONRF3-204ENST00000439603 LOC105371045A0A1W2PR82 267 aa38.06■■■■□ 3.68
LONRF3-204ENST00000439603 PBRM1Q86U86 1689 aa38.04■■■■□ 3.68
LONRF3-204ENST00000439603 PRXQ9BXM0 1461 aa38.04■■■■□ 3.68
LONRF3-204ENST00000439603 CARMIL1Q5VZK9 1371 aa38.01■■■■□ 3.68
LONRF3-204ENST00000439603 KIF21BO75037 1637 aa37.99■■■■□ 3.67
LONRF3-204ENST00000439603 EHMT2Q96KQ7 1210 aa37.99■■■■□ 3.67
LONRF3-204ENST00000439603 CUL7Q14999 1698 aa37.96■■■■□ 3.67
LONRF3-204ENST00000439603 RAPGEF2Q9Y4G8 1499 aa37.91■■■■□ 3.66
LONRF3-204ENST00000439603 GOLGA3Q08378 1498 aa37.9■■■■□ 3.66
LONRF3-204ENST00000439603 SNAPC4Q5SXM2 1469 aa37.87■■■■□ 3.65
LONRF3-204ENST00000439603 FHAD1B1AJZ9 1412 aa37.84■■■■□ 3.65
LONRF3-204ENST00000439603 MAGI1Q96QZ7 1491 aaPredicted RBP37.84■■■■□ 3.65
LONRF3-204ENST00000439603 ADAMTS12P58397 1594 aa37.82■■■■□ 3.65
LONRF3-204ENST00000439603 UBTFP17480 764 aaKnown RBP37.78■■■■□ 3.64
LONRF3-204ENST00000439603 SYNJ2O15056 1496 aa37.68■■■■□ 3.62
LONRF3-204ENST00000439603 TNIKQ9UKE5 1360 aa37.67■■■■□ 3.62
LONRF3-204ENST00000439603 CHMP7Q8WUX9 453 aaPredicted RBP37.65■■■■□ 3.62
LONRF3-204ENST00000439603 FBLN2P98095 1184 aa37.6■■■■□ 3.61
LONRF3-204ENST00000439603 GRIN2AQ12879 1464 aa37.59■■■■□ 3.61
LONRF3-204ENST00000439603 CHD1O14646 1710 aa37.42■■■■□ 3.58
LONRF3-204ENST00000439603 CTTNBP2Q8WZ74 1663 aa37.41■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms