RNA–Protein interactions for RNA: ENST00000438830.5

SEMA4A-208, Transcript of semaphorin 4A, humanhuman

TSL 5

Gene SEMA4A, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4A-208ENST00000438830 NISCHQ9Y2I1 1504 aa46.83■■■■■ 5.09
SEMA4A-208ENST00000438830 CCDC180Q9P1Z9 1646 aa41.46■■■■■ 4.23
SEMA4A-208ENST00000438830 ABCC9O60706 1549 aa39.59■■■■□ 3.93
SEMA4A-208ENST00000438830 ZCCHC6Q5VYS8 1495 aaKnown RBP39.22■■■■□ 3.87
SEMA4A-208ENST00000438830 DCAF1Q9Y4B6 1507 aa38.85■■■■□ 3.81
SEMA4A-208ENST00000438830 MYO15BQ96JP2 1530 aa38.73■■■■□ 3.79
SEMA4A-208ENST00000438830 NACADO15069 1562 aa38.68■■■■□ 3.78
SEMA4A-208ENST00000438830 DCAF8L2P0C7V8 631 aa38.6■■■■□ 3.77
SEMA4A-208ENST00000438830 RB1CC1Q8TDY2 1594 aa38.53■■■■□ 3.76
SEMA4A-208ENST00000438830 UNC13AQ9UPW8 1703 aa37.82■■■■□ 3.65
SEMA4A-208ENST00000438830 SCRIBQ14160 1630 aa37.77■■■■□ 3.64
SEMA4A-208ENST00000438830 SHROOM4Q9ULL8 1493 aa37.63■■■■□ 3.61
SEMA4A-208ENST00000438830 BICRAQ9NZM4 1560 aa37.36■■■■□ 3.57
SEMA4A-208ENST00000438830 PABPN1Q86U42 306 aaKnown RBP eCLIP37.01■■■■□ 3.52
SEMA4A-208ENST00000438830 CECR2Q9BXF3 1484 aa36.34■■■■□ 3.41
SEMA4A-208ENST00000438830 EIF4G1Q04637 1599 aaKnown RBP36.28■■■■□ 3.4
SEMA4A-208ENST00000438830 BAZ1AQ9NRL2 1556 aaPredicted RBP36.27■■■■□ 3.4
SEMA4A-208ENST00000438830 SMARCA4P51532 1647 aa36.24■■■■□ 3.39
SEMA4A-208ENST00000438830 MROH2BQ7Z745 1585 aa36.09■■■■□ 3.37
SEMA4A-208ENST00000438830 RSF1Q96T23 1441 aaPredicted RBP36.02■■■■□ 3.36
SEMA4A-208ENST00000438830 SUPT5HO00267 1087 aaKnown RBP35.97■■■■□ 3.35
SEMA4A-208ENST00000438830 CC2D2AQ9P2K1 1620 aa35.94■■■■□ 3.34
SEMA4A-208ENST00000438830 PEG3Q9GZU2 1588 aa35.89■■■■□ 3.34
SEMA4A-208ENST00000438830 SMARCA2P51531 1590 aa35.81■■■■□ 3.32
SEMA4A-208ENST00000438830 WIZO95785 1651 aa35.79■■■■□ 3.32
SEMA4A-208ENST00000438830 ATAD2BQ9ULI0 1458 aa35.75■■■■□ 3.31
SEMA4A-208ENST00000438830 HMGXB3Q12766 1538 aa35.62■■■■□ 3.29
SEMA4A-208ENST00000438830 NCAPD3P42695 1498 aa35.61■■■■□ 3.29
SEMA4A-208ENST00000438830 DNAJC5BQ9UF47 199 aa35.52■■■■□ 3.28
SEMA4A-208ENST00000438830 BAZ1BQ9UIG0 1483 aaKnown RBP35.52■■■■□ 3.28
SEMA4A-208ENST00000438830 TOP2AP11388 1531 aaKnown RBP35.47■■■■□ 3.27
SEMA4A-208ENST00000438830 CCDC88BA6NC98 1476 aa34.97■■■■□ 3.19
SEMA4A-208ENST00000438830 PRDM2Q13029 1718 aa34.65■■■■□ 3.14
SEMA4A-208ENST00000438830 LAMC3Q9Y6N6 1575 aa34.63■■■■□ 3.13
SEMA4A-208ENST00000438830 CFTRP13569 1480 aa34.58■■■■□ 3.13
SEMA4A-208ENST00000438830 CADPSQ9ULU8 1353 aa34.58■■■■□ 3.13
SEMA4A-208ENST00000438830 NESP48681 1621 aa34.51■■■■□ 3.11
SEMA4A-208ENST00000438830 KIF21AQ7Z4S6 1674 aa34.28■■■■□ 3.08
SEMA4A-208ENST00000438830 PDS5BQ9NTI5 1447 aa34.27■■■■□ 3.08
SEMA4A-208ENST00000438830 FANCD2Q9BXW9 1451 aa34.21■■■■□ 3.07
SEMA4A-208ENST00000438830 CHIC1Q5VXU3 224 aa34.2■■■■□ 3.07
SEMA4A-208ENST00000438830 CEP164Q9UPV0 1460 aa34.13■■■■□ 3.05
SEMA4A-208ENST00000438830 ERCC6Q03468 1493 aa34.07■■■■□ 3.04
SEMA4A-208ENST00000438830 ABCC8Q09428 1581 aa34.06■■■■□ 3.04
SEMA4A-208ENST00000438830 WRNQ14191 1432 aaPredicted RBP eCLIP33.96■■■■□ 3.03
SEMA4A-208ENST00000438830 THOC2Q8NI27 1593 aaKnown RBP33.96■■■■□ 3.03
SEMA4A-208ENST00000438830 TRIM41Q8WV44 630 aa33.93■■■■□ 3.02
SEMA4A-208ENST00000438830 MRC2Q9UBG0 1479 aa33.92■■■■□ 3.02
SEMA4A-208ENST00000438830 DNMBPQ6XZF7 1577 aa33.87■■■■□ 3.01
SEMA4A-208ENST00000438830 URB2Q14146 1524 aaKnown RBP33.85■■■■□ 3.01
SEMA4A-208ENST00000438830 BIVM-ERCC5R4GMW8 1640 aa33.84■■■■□ 3.01
SEMA4A-208ENST00000438830 WDR62O43379 1518 aa33.84■■■■□ 3.01
SEMA4A-208ENST00000438830 CUX1P39880 1505 aa33.83■■■■□ 3.01
SEMA4A-208ENST00000438830 SYNJ1O43426 1573 aa33.81■■■■□ 3
SEMA4A-208ENST00000438830 TOP2BQ02880 1626 aa33.79■■■■□ 3
SEMA4A-208ENST00000438830 TOPBP1Q92547 1522 aa33.79■■■■□ 3
SEMA4A-208ENST00000438830 FGD5Q6ZNL6 1462 aa33.57■■■□□ 2.97
SEMA4A-208ENST00000438830 POLA1P09884 1462 aaPredicted RBP33.55■■■□□ 2.96
SEMA4A-208ENST00000438830 CUX2O14529 1486 aa33.5■■■□□ 2.95
SEMA4A-208ENST00000438830 WDR97A6NE52 1622 aa33.43■■■□□ 2.94
SEMA4A-208ENST00000438830 TARBP1Q13395 1621 aaKnown RBP33.42■■■□□ 2.94
SEMA4A-208ENST00000438830 IFT140Q96RY7 1462 aa33.37■■■□□ 2.93
SEMA4A-208ENST00000438830 SOGA1O94964 1423 aa33.35■■■□□ 2.93
SEMA4A-208ENST00000438830 RAD54L2Q9Y4B4 1467 aa33.34■■■□□ 2.93
SEMA4A-208ENST00000438830 ABCA10Q8WWZ4 1543 aa33.31■■■□□ 2.92
SEMA4A-208ENST00000438830 EEA1Q15075 1411 aa33.3■■■□□ 2.92
SEMA4A-208ENST00000438830 FAM9AQ8IZU1 332 aaPredicted RBP33.2■■■□□ 2.91
SEMA4A-208ENST00000438830 ABCA5Q8WWZ7 1642 aa33.19■■■□□ 2.9
SEMA4A-208ENST00000438830 KIF27Q86VH2 1401 aa33.18■■■□□ 2.9
SEMA4A-208ENST00000438830 RUSC2Q8N2Y8 1516 aa33.18■■■□□ 2.9
SEMA4A-208ENST00000438830 EIF4G3O43432 1585 aaKnown RBP33.15■■■□□ 2.9
SEMA4A-208ENST00000438830 ZNF608Q9ULD9 1512 aaPredicted RBP33.12■■■□□ 2.89
SEMA4A-208ENST00000438830 PBRM1Q86U86 1689 aa33.08■■■□□ 2.89
SEMA4A-208ENST00000438830 CSRNP3Q8WYN3 585 aa33.04■■■□□ 2.88
SEMA4A-208ENST00000438830 TDRD9Q8NDG6 1382 aaKnown RBP33.03■■■□□ 2.88
SEMA4A-208ENST00000438830 GAPVD1Q14C86 1478 aa33.03■■■□□ 2.88
SEMA4A-208ENST00000438830 AQRO60306 1485 aaKnown RBP eCLIP32.99■■■□□ 2.87
SEMA4A-208ENST00000438830 ERICH3Q5RHP9 1530 aa32.95■■■□□ 2.87
SEMA4A-208ENST00000438830 GRIN2BQ13224 1484 aa32.93■■■□□ 2.86
SEMA4A-208ENST00000438830 CUL7Q14999 1698 aa32.87■■■□□ 2.85
SEMA4A-208ENST00000438830 KIF21BO75037 1637 aa32.87■■■□□ 2.85
SEMA4A-208ENST00000438830 IGF1RP08069 1367 aa32.85■■■□□ 2.85
SEMA4A-208ENST00000438830 ADAMTS12P58397 1594 aa32.8■■■□□ 2.84
SEMA4A-208ENST00000438830 MAGI1Q96QZ7 1491 aaPredicted RBP32.8■■■□□ 2.84
SEMA4A-208ENST00000438830 PRXQ9BXM0 1461 aa32.8■■■□□ 2.84
SEMA4A-208ENST00000438830 LOC105371045A0A1W2PR82 267 aa32.79■■■□□ 2.84
SEMA4A-208ENST00000438830 GOLGA3Q08378 1498 aa32.78■■■□□ 2.84
SEMA4A-208ENST00000438830 SNAPC4Q5SXM2 1469 aa32.78■■■□□ 2.84
SEMA4A-208ENST00000438830 CARMIL1Q5VZK9 1371 aa32.71■■■□□ 2.83
SEMA4A-208ENST00000438830 EHMT2Q96KQ7 1210 aa32.68■■■□□ 2.82
SEMA4A-208ENST00000438830 RAPGEF2Q9Y4G8 1499 aa32.67■■■□□ 2.82
SEMA4A-208ENST00000438830 FHAD1B1AJZ9 1412 aa32.67■■■□□ 2.82
SEMA4A-208ENST00000438830 CHD1O14646 1710 aa32.63■■■□□ 2.81
SEMA4A-208ENST00000438830 SYNJ2O15056 1496 aa32.63■■■□□ 2.81
SEMA4A-208ENST00000438830 UBTFP17480 764 aaKnown RBP32.56■■■□□ 2.8
SEMA4A-208ENST00000438830 TNIKQ9UKE5 1360 aa32.55■■■□□ 2.8
SEMA4A-208ENST00000438830 GRIN2AQ12879 1464 aa32.52■■■□□ 2.8
SEMA4A-208ENST00000438830 CTTNBP2Q8WZ74 1663 aa32.41■■■□□ 2.78
SEMA4A-208ENST00000438830 CHMP7Q8WUX9 453 aaPredicted RBP32.41■■■□□ 2.78
SEMA4A-208ENST00000438830 CEP170Q5SW79 1584 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms