RNA–Protein interactions for RNA: ENST00000438770.6

LINC01535-201, Transcript of long intergenic non-protein coding RNA 1535, humanhuman

TSL 4

Gene LINC01535, Length 553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01535-201ENST00000438770 NISCHQ9Y2I1 1504 aa21.83■■□□□ 1.09
LINC01535-201ENST00000438770 ABCC9O60706 1549 aa20.29■□□□□ 0.84
LINC01535-201ENST00000438770 CCDC180Q9P1Z9 1646 aa19.83■□□□□ 0.76
LINC01535-201ENST00000438770 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
LINC01535-201ENST00000438770 RB1CC1Q8TDY2 1594 aa19.06■□□□□ 0.64
LINC01535-201ENST00000438770 AEBP2Q6ZN18 517 aaPredicted RBP19.01■□□□□ 0.63
LINC01535-201ENST00000438770 NACADO15069 1562 aa18.81■□□□□ 0.6
LINC01535-201ENST00000438770 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
LINC01535-201ENST00000438770 UNC13AQ9UPW8 1703 aa18.77■□□□□ 0.59
LINC01535-201ENST00000438770 BICRAQ9NZM4 1560 aa18.59■□□□□ 0.57
LINC01535-201ENST00000438770 DCAF8L2P0C7V8 631 aa18.59■□□□□ 0.57
LINC01535-201ENST00000438770 MYO15BQ96JP2 1530 aa18.35■□□□□ 0.53
LINC01535-201ENST00000438770 CC2D2AQ9P2K1 1620 aa18.32■□□□□ 0.52
LINC01535-201ENST00000438770 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
LINC01535-201ENST00000438770 SHROOM4Q9ULL8 1493 aa18.19■□□□□ 0.5
LINC01535-201ENST00000438770 EIF4G1Q04637 1599 aaKnown RBP18.15■□□□□ 0.5
LINC01535-201ENST00000438770 DNAJC5Q9H3Z4 198 aa18.12■□□□□ 0.49
LINC01535-201ENST00000438770 SCRIBQ14160 1630 aa18.09■□□□□ 0.49
LINC01535-201ENST00000438770 ZCCHC6Q5VYS8 1495 aaKnown RBP18.01■□□□□ 0.47
LINC01535-201ENST00000438770 DCAF1Q9Y4B6 1507 aa17.97■□□□□ 0.47
LINC01535-201ENST00000438770 CHIC1Q5VXU3 224 aa17.78■□□□□ 0.44
LINC01535-201ENST00000438770 CUX2O14529 1486 aa17.63■□□□□ 0.41
LINC01535-201ENST00000438770 ERCC6Q03468 1493 aa17.52■□□□□ 0.4
LINC01535-201ENST00000438770 NCAPD3P42695 1498 aa17.35■□□□□ 0.37
LINC01535-201ENST00000438770 NESP48681 1621 aa17.32■□□□□ 0.36
LINC01535-201ENST00000438770 ATAD2BQ9ULI0 1458 aa17.26■□□□□ 0.35
LINC01535-201ENST00000438770 THOC2Q8NI27 1593 aaKnown RBP17.25■□□□□ 0.35
LINC01535-201ENST00000438770 HMGXB3Q12766 1538 aa17.22■□□□□ 0.35
LINC01535-201ENST00000438770 SMARCA2P51531 1590 aa17.19■□□□□ 0.34
LINC01535-201ENST00000438770 TRIM41Q8WV44 630 aa17.18■□□□□ 0.34
LINC01535-201ENST00000438770 SMARCA4P51532 1647 aa17.18■□□□□ 0.34
LINC01535-201ENST00000438770 KIF21AQ7Z4S6 1674 aa17.12■□□□□ 0.33
LINC01535-201ENST00000438770 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.32
LINC01535-201ENST00000438770 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
LINC01535-201ENST00000438770 PEG3Q9GZU2 1588 aa16.97■□□□□ 0.31
LINC01535-201ENST00000438770 BAZ1AQ9NRL2 1556 aaPredicted RBP16.97■□□□□ 0.31
LINC01535-201ENST00000438770 PDS5BQ9NTI5 1447 aa16.94■□□□□ 0.3
LINC01535-201ENST00000438770 MRC2Q9UBG0 1479 aa16.87■□□□□ 0.29
LINC01535-201ENST00000438770 WDR62O43379 1518 aa16.87■□□□□ 0.29
LINC01535-201ENST00000438770 MROH2BQ7Z745 1585 aa16.85■□□□□ 0.29
LINC01535-201ENST00000438770 CADPSQ9ULU8 1353 aa16.79■□□□□ 0.28
LINC01535-201ENST00000438770 CEP164Q9UPV0 1460 aa16.71■□□□□ 0.27
LINC01535-201ENST00000438770 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
LINC01535-201ENST00000438770 RIMBP3CA6NJZ7 1639 aa16.66■□□□□ 0.26
LINC01535-201ENST00000438770 RIMBP3BA6NNM3 1639 aa16.66■□□□□ 0.26
LINC01535-201ENST00000438770 RIMBP3Q9UFD9 1639 aa16.66■□□□□ 0.26
LINC01535-201ENST00000438770 WIZO95785 1651 aa16.65■□□□□ 0.26
LINC01535-201ENST00000438770 FANCD2Q9BXW9 1451 aa16.65■□□□□ 0.26
LINC01535-201ENST00000438770 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
LINC01535-201ENST00000438770 CFTRP13569 1480 aa16.53■□□□□ 0.24
LINC01535-201ENST00000438770 ARHGEF11O15085 1522 aa16.52■□□□□ 0.24
LINC01535-201ENST00000438770 RSF1Q96T23 1441 aaPredicted RBP16.48■□□□□ 0.23
LINC01535-201ENST00000438770 ZNF608Q9ULD9 1512 aaPredicted RBP16.45■□□□□ 0.22
LINC01535-201ENST00000438770 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
LINC01535-201ENST00000438770 SUPT5HO00267 1087 aaKnown RBP16.38■□□□□ 0.21
LINC01535-201ENST00000438770 IFT140Q96RY7 1462 aa16.37■□□□□ 0.21
LINC01535-201ENST00000438770 TOP2AP11388 1531 aaKnown RBP16.37■□□□□ 0.21
LINC01535-201ENST00000438770 CYB5RLQ6IPT4 315 aa16.37■□□□□ 0.21
LINC01535-201ENST00000438770 EIF4G3O43432 1585 aaKnown RBP16.36■□□□□ 0.21
LINC01535-201ENST00000438770 CHD1O14646 1710 aa16.36■□□□□ 0.21
LINC01535-201ENST00000438770 ARAP1Q96P48 1450 aa16.34■□□□□ 0.21
LINC01535-201ENST00000438770 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
LINC01535-201ENST00000438770 TOPBP1Q92547 1522 aa16.29■□□□□ 0.2
LINC01535-201ENST00000438770 TARBP1Q13395 1621 aaKnown RBP16.22■□□□□ 0.19
LINC01535-201ENST00000438770 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.19
LINC01535-201ENST00000438770 DNMBPQ6XZF7 1577 aa16.2■□□□□ 0.18
LINC01535-201ENST00000438770 SENP3Q9H4L4 574 aaPredicted RBP16.19■□□□□ 0.18
LINC01535-201ENST00000438770 CCDC88BA6NC98 1476 aa16.17■□□□□ 0.18
LINC01535-201ENST00000438770 FBLN2P98095 1184 aa16.16■□□□□ 0.18
LINC01535-201ENST00000438770 ABCC8Q09428 1581 aa16.14■□□□□ 0.17
LINC01535-201ENST00000438770 CLASP1Q7Z460 1538 aa16.1■□□□□ 0.17
LINC01535-201ENST00000438770 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
LINC01535-201ENST00000438770 RAD54L2Q9Y4B4 1467 aa16.06■□□□□ 0.16
LINC01535-201ENST00000438770 SNAPC4Q5SXM2 1469 aa16.05■□□□□ 0.16
LINC01535-201ENST00000438770 SYNJ1O43426 1573 aa16.02■□□□□ 0.16
LINC01535-201ENST00000438770 TDRD9Q8NDG6 1382 aaKnown RBP16.01■□□□□ 0.15
LINC01535-201ENST00000438770 PHF23Q9BUL5 403 aaPredicted RBP15.97■□□□□ 0.15
LINC01535-201ENST00000438770 SOGA1O94964 1423 aa15.96■□□□□ 0.15
LINC01535-201ENST00000438770 WDR97A6NE52 1622 aa15.95■□□□□ 0.14
LINC01535-201ENST00000438770 MAGI1Q96QZ7 1491 aaPredicted RBP15.95■□□□□ 0.14
LINC01535-201ENST00000438770 CHMP7Q8WUX9 453 aaPredicted RBP15.94■□□□□ 0.14
LINC01535-201ENST00000438770 GAPVD1Q14C86 1478 aa15.93■□□□□ 0.14
LINC01535-201ENST00000438770 FGD5Q6ZNL6 1462 aa15.93■□□□□ 0.14
LINC01535-201ENST00000438770 SYNJ2O15056 1496 aa15.91■□□□□ 0.14
LINC01535-201ENST00000438770 PBRM1Q86U86 1689 aa15.9■□□□□ 0.14
LINC01535-201ENST00000438770 GRIN2BQ13224 1484 aa15.9■□□□□ 0.14
LINC01535-201ENST00000438770 CUX1P39880 1505 aa15.87■□□□□ 0.13
LINC01535-201ENST00000438770 ERCC6L2Q5T890 1561 aa15.87■□□□□ 0.13
LINC01535-201ENST00000438770 KIF13AQ9H1H9 1805 aa15.8■□□□□ 0.12
LINC01535-201ENST00000438770 ABCA5Q8WWZ7 1642 aa15.78■□□□□ 0.12
LINC01535-201ENST00000438770 CEP170Q5SW79 1584 aa15.75■□□□□ 0.11
LINC01535-201ENST00000438770 GRIN2AQ12879 1464 aa15.71■□□□□ 0.11
LINC01535-201ENST00000438770 ABCA10Q8WWZ4 1543 aa15.7■□□□□ 0.1
LINC01535-201ENST00000438770 SHROOM2Q13796 1616 aa15.7■□□□□ 0.1
LINC01535-201ENST00000438770 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
LINC01535-201ENST00000438770 NUP160Q12769 1436 aa15.68■□□□□ 0.1
LINC01535-201ENST00000438770 ILDR1Q86SU0 546 aaPredicted RBP15.58■□□□□ 0.08
LINC01535-201ENST00000438770 KDM4FA0A1W2PPD8 638 aa15.56■□□□□ 0.08
LINC01535-201ENST00000438770 ABCC10Q5T3U5 1492 aa15.56■□□□□ 0.08
LINC01535-201ENST00000438770 DIP2BQ9P265 1576 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms