RNA–Protein interactions for RNA: ENST00000438727.2

IFNWP19-201, Transcript of interferon omega 1 pseudogene 19, humanhuman

BASIC

Gene IFNWP19, Length 566 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFNWP19-201ENST00000438727 NISCHQ9Y2I1 1504 aa28.3■■■□□ 2.12
IFNWP19-201ENST00000438727 ABCC9O60706 1549 aa26.54■■□□□ 1.84
IFNWP19-201ENST00000438727 DNAJC5BQ9UF47 199 aa25.66■■□□□ 1.7
IFNWP19-201ENST00000438727 CCDC180Q9P1Z9 1646 aa25.6■■□□□ 1.69
IFNWP19-201ENST00000438727 RB1CC1Q8TDY2 1594 aa24.88■■□□□ 1.57
IFNWP19-201ENST00000438727 PABPN1Q86U42 306 aaKnown RBP eCLIP24.66■■□□□ 1.54
IFNWP19-201ENST00000438727 NACADO15069 1562 aa24.54■■□□□ 1.52
IFNWP19-201ENST00000438727 DCAF8L2P0C7V8 631 aa24.4■■□□□ 1.5
IFNWP19-201ENST00000438727 DNAJC5Q9H3Z4 198 aa24.25■■□□□ 1.47
IFNWP19-201ENST00000438727 BICRAQ9NZM4 1560 aa24.1■■□□□ 1.45
IFNWP19-201ENST00000438727 CECR2Q9BXF3 1484 aa24.03■■□□□ 1.44
IFNWP19-201ENST00000438727 UNC13AQ9UPW8 1703 aa24■■□□□ 1.43
IFNWP19-201ENST00000438727 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
IFNWP19-201ENST00000438727 SHROOM4Q9ULL8 1493 aa23.85■■□□□ 1.41
IFNWP19-201ENST00000438727 CC2D2AQ9P2K1 1620 aa23.84■■□□□ 1.41
IFNWP19-201ENST00000438727 EIF4G1Q04637 1599 aaKnown RBP23.63■■□□□ 1.37
IFNWP19-201ENST00000438727 DCAF1Q9Y4B6 1507 aa23.34■■□□□ 1.33
IFNWP19-201ENST00000438727 SCRIBQ14160 1630 aa23.32■■□□□ 1.32
IFNWP19-201ENST00000438727 ZCCHC6Q5VYS8 1495 aaKnown RBP23.25■■□□□ 1.31
IFNWP19-201ENST00000438727 CUX2O14529 1486 aa23.24■■□□□ 1.31
IFNWP19-201ENST00000438727 ERCC6Q03468 1493 aa23.03■■□□□ 1.28
IFNWP19-201ENST00000438727 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
IFNWP19-201ENST00000438727 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
IFNWP19-201ENST00000438727 NESP48681 1621 aa22.52■■□□□ 1.2
IFNWP19-201ENST00000438727 ATAD2BQ9ULI0 1458 aa22.5■■□□□ 1.19
IFNWP19-201ENST00000438727 HMGXB3Q12766 1538 aa22.39■■□□□ 1.17
IFNWP19-201ENST00000438727 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
IFNWP19-201ENST00000438727 THOC2Q8NI27 1593 aaKnown RBP22.37■■□□□ 1.17
IFNWP19-201ENST00000438727 PDS5BQ9NTI5 1447 aa22.29■■□□□ 1.16
IFNWP19-201ENST00000438727 LAMC3Q9Y6N6 1575 aa22.25■■□□□ 1.15
IFNWP19-201ENST00000438727 BAZ1BQ9UIG0 1483 aaKnown RBP22.24■■□□□ 1.15
IFNWP19-201ENST00000438727 OSCARQ8IYS5 282 aa22.18■■□□□ 1.14
IFNWP19-201ENST00000438727 SMARCA4P51532 1647 aa22.16■■□□□ 1.14
IFNWP19-201ENST00000438727 MRC2Q9UBG0 1479 aa22.05■■□□□ 1.12
IFNWP19-201ENST00000438727 KIF21AQ7Z4S6 1674 aa22.04■■□□□ 1.12
IFNWP19-201ENST00000438727 CADPSQ9ULU8 1353 aa22.03■■□□□ 1.12
IFNWP19-201ENST00000438727 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.12
IFNWP19-201ENST00000438727 PEG3Q9GZU2 1588 aa21.99■■□□□ 1.11
IFNWP19-201ENST00000438727 WDR62O43379 1518 aa21.97■■□□□ 1.11
IFNWP19-201ENST00000438727 CEP164Q9UPV0 1460 aa21.8■■□□□ 1.08
IFNWP19-201ENST00000438727 MROH2BQ7Z745 1585 aa21.76■■□□□ 1.07
IFNWP19-201ENST00000438727 TRHP20396 242 aaPredicted RBP21.72■■□□□ 1.07
IFNWP19-201ENST00000438727 AEBP2Q6ZN18 517 aaPredicted RBP21.72■■□□□ 1.07
IFNWP19-201ENST00000438727 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
IFNWP19-201ENST00000438727 RIMBP3CA6NJZ7 1639 aa21.71■■□□□ 1.07
IFNWP19-201ENST00000438727 RIMBP3BA6NNM3 1639 aa21.71■■□□□ 1.07
IFNWP19-201ENST00000438727 RIMBP3Q9UFD9 1639 aa21.71■■□□□ 1.07
IFNWP19-201ENST00000438727 CYB5RLQ6IPT4 315 aa21.68■■□□□ 1.06
IFNWP19-201ENST00000438727 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
IFNWP19-201ENST00000438727 CFTRP13569 1480 aa21.56■■□□□ 1.04
IFNWP19-201ENST00000438727 URB2Q14146 1524 aaKnown RBP21.53■■□□□ 1.04
IFNWP19-201ENST00000438727 IFT140Q96RY7 1462 aa21.44■■□□□ 1.02
IFNWP19-201ENST00000438727 ZNF608Q9ULD9 1512 aaPredicted RBP21.41■■□□□ 1.02
IFNWP19-201ENST00000438727 ARAP1Q96P48 1450 aa21.37■■□□□ 1.01
IFNWP19-201ENST00000438727 WIZO95785 1651 aa21.36■■□□□ 1.01
IFNWP19-201ENST00000438727 RSF1Q96T23 1441 aaPredicted RBP21.32■■□□□ 1
IFNWP19-201ENST00000438727 FBLN2P98095 1184 aa21.3■■□□□ 1
IFNWP19-201ENST00000438727 TOPBP1Q92547 1522 aa21.18■□□□□ 0.98
IFNWP19-201ENST00000438727 ABCC8Q09428 1581 aa21.17■□□□□ 0.98
IFNWP19-201ENST00000438727 EIF4G3O43432 1585 aaKnown RBP21.16■□□□□ 0.98
IFNWP19-201ENST00000438727 AQRO60306 1485 aaKnown RBP eCLIP21.16■□□□□ 0.98
IFNWP19-201ENST00000438727 TOP2AP11388 1531 aaKnown RBP21.13■□□□□ 0.97
IFNWP19-201ENST00000438727 CHD1O14646 1710 aa21.05■□□□□ 0.96
IFNWP19-201ENST00000438727 CHMP7Q8WUX9 453 aaPredicted RBP21.03■□□□□ 0.96
IFNWP19-201ENST00000438727 DNMBPQ6XZF7 1577 aa21■□□□□ 0.95
IFNWP19-201ENST00000438727 TARBP1Q13395 1621 aaKnown RBP20.97■□□□□ 0.95
IFNWP19-201ENST00000438727 CCDC88BA6NC98 1476 aa20.95■□□□□ 0.94
IFNWP19-201ENST00000438727 TDRD9Q8NDG6 1382 aaKnown RBP20.95■□□□□ 0.94
IFNWP19-201ENST00000438727 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
IFNWP19-201ENST00000438727 PRDM2Q13029 1718 aa20.93■□□□□ 0.94
IFNWP19-201ENST00000438727 POLA1P09884 1462 aaPredicted RBP20.92■□□□□ 0.94
IFNWP19-201ENST00000438727 SYNJ1O43426 1573 aa20.89■□□□□ 0.94
IFNWP19-201ENST00000438727 SOGA1O94964 1423 aa20.89■□□□□ 0.94
IFNWP19-201ENST00000438727 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
IFNWP19-201ENST00000438727 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
IFNWP19-201ENST00000438727 RAD54L2Q9Y4B4 1467 aa20.86■□□□□ 0.93
IFNWP19-201ENST00000438727 MAGI1Q96QZ7 1491 aaPredicted RBP20.84■□□□□ 0.93
IFNWP19-201ENST00000438727 ILDR1Q86SU0 546 aaPredicted RBP20.81■□□□□ 0.92
IFNWP19-201ENST00000438727 SYNJ2O15056 1496 aa20.79■□□□□ 0.92
IFNWP19-201ENST00000438727 GRIN2BQ13224 1484 aa20.77■□□□□ 0.92
IFNWP19-201ENST00000438727 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
IFNWP19-201ENST00000438727 FGD5Q6ZNL6 1462 aa20.67■□□□□ 0.9
IFNWP19-201ENST00000438727 KDM4FA0A1W2PPD8 638 aa20.59■□□□□ 0.89
IFNWP19-201ENST00000438727 FAM69CQ0P6D2 419 aa20.54■□□□□ 0.88
IFNWP19-201ENST00000438727 ERCC6L2Q5T890 1561 aa20.52■□□□□ 0.88
IFNWP19-201ENST00000438727 CUX1P39880 1505 aa20.48■□□□□ 0.87
IFNWP19-201ENST00000438727 NPM1P06748 294 aaKnown RBP eCLIP20.48■□□□□ 0.87
IFNWP19-201ENST00000438727 GRIN2AQ12879 1464 aa20.47■□□□□ 0.87
IFNWP19-201ENST00000438727 CEP170Q5SW79 1584 aa20.46■□□□□ 0.87
IFNWP19-201ENST00000438727 NUP160Q12769 1436 aa20.44■□□□□ 0.86
IFNWP19-201ENST00000438727 ABCC10Q5T3U5 1492 aa20.43■□□□□ 0.86
IFNWP19-201ENST00000438727 ABCA10Q8WWZ4 1543 aa20.41■□□□□ 0.86
IFNWP19-201ENST00000438727 PBRM1Q86U86 1689 aa20.38■□□□□ 0.85
IFNWP19-201ENST00000438727 KIF13AQ9H1H9 1805 aa20.37■□□□□ 0.85
IFNWP19-201ENST00000438727 PRG4Q92954 1404 aaPredicted RBP20.36■□□□□ 0.85
IFNWP19-201ENST00000438727 JPH4Q96JJ6 628 aa20.35■□□□□ 0.85
IFNWP19-201ENST00000438727 ABCA5Q8WWZ7 1642 aa20.33■□□□□ 0.84
IFNWP19-201ENST00000438727 SHROOM2Q13796 1616 aa20.32■□□□□ 0.84
IFNWP19-201ENST00000438727 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
IFNWP19-201ENST00000438727 KDM6BO15054 1643 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms