RNA–Protein interactions for RNA: ENST00000438666.6

SPART-202, Transcript of spartin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPART, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPART-202ENST00000438666 NISCHQ9Y2I1 1504 aa10.13□□□□□ -0.79
SPART-202ENST00000438666 CCDC180Q9P1Z9 1646 aa10.07□□□□□ -0.8
SPART-202ENST00000438666 UNC13AQ9UPW8 1703 aa10□□□□□ -0.81
SPART-202ENST00000438666 BICRAQ9NZM4 1560 aa9.53□□□□□ -0.88
SPART-202ENST00000438666 MYO15BQ96JP2 1530 aa9.39□□□□□ -0.91
SPART-202ENST00000438666 DCAF8L2P0C7V8 631 aa9.24□□□□□ -0.93
SPART-202ENST00000438666 SHROOM4Q9ULL8 1493 aa9.23□□□□□ -0.93
SPART-202ENST00000438666 DNAJC5BQ9UF47 199 aa9.08□□□□□ -0.96
SPART-202ENST00000438666 NACADO15069 1562 aa9.02□□□□□ -0.97
SPART-202ENST00000438666 DCAF1Q9Y4B6 1507 aa8.99□□□□□ -0.97
SPART-202ENST00000438666 RB1CC1Q8TDY2 1594 aa8.95□□□□□ -0.98
SPART-202ENST00000438666 THOC2Q8NI27 1593 aaKnown RBP8.85□□□□□ -0.99
SPART-202ENST00000438666 ABCC9O60706 1549 aa8.83□□□□□ -1
SPART-202ENST00000438666 CC2D2AQ9P2K1 1620 aa8.82□□□□□ -1
SPART-202ENST00000438666 PEG3Q9GZU2 1588 aa8.73□□□□□ -1.01
SPART-202ENST00000438666 EIF4G1Q04637 1599 aaKnown RBP8.72□□□□□ -1.01
SPART-202ENST00000438666 PRDM2Q13029 1718 aa8.64□□□□□ -1.03
SPART-202ENST00000438666 SCRIBQ14160 1630 aa8.57□□□□□ -1.04
SPART-202ENST00000438666 ZCCHC6Q5VYS8 1495 aaKnown RBP8.54□□□□□ -1.04
SPART-202ENST00000438666 CUX2O14529 1486 aa8.53□□□□□ -1.04
SPART-202ENST00000438666 SUPT5HO00267 1087 aaKnown RBP8.49□□□□□ -1.05
SPART-202ENST00000438666 KIF21AQ7Z4S6 1674 aa8.48□□□□□ -1.05
SPART-202ENST00000438666 HMGXB3Q12766 1538 aa8.43□□□□□ -1.06
SPART-202ENST00000438666 DNAJC5Q9H3Z4 198 aa8.41□□□□□ -1.06
SPART-202ENST00000438666 WDR62O43379 1518 aa8.33□□□□□ -1.08
SPART-202ENST00000438666 WDR97A6NE52 1622 aa8.32□□□□□ -1.08
SPART-202ENST00000438666 SMARCA2P51531 1590 aa8.3□□□□□ -1.08
SPART-202ENST00000438666 NCAPD3P42695 1498 aa8.23□□□□□ -1.09
SPART-202ENST00000438666 CECR2Q9BXF3 1484 aa8.22□□□□□ -1.09
SPART-202ENST00000438666 LAMC3Q9Y6N6 1575 aa8.21□□□□□ -1.09
SPART-202ENST00000438666 KIF13AQ9H1H9 1805 aa8.19□□□□□ -1.1
SPART-202ENST00000438666 SMARCA4P51532 1647 aa8.18□□□□□ -1.1
SPART-202ENST00000438666 RIMBP3CA6NJZ7 1639 aa8.15□□□□□ -1.11
SPART-202ENST00000438666 RIMBP3BA6NNM3 1639 aa8.15□□□□□ -1.11
SPART-202ENST00000438666 RIMBP3Q9UFD9 1639 aa8.15□□□□□ -1.11
SPART-202ENST00000438666 TARBP1Q13395 1621 aaKnown RBP8.1□□□□□ -1.11
SPART-202ENST00000438666 BAZ1AQ9NRL2 1556 aaPredicted RBP8.1□□□□□ -1.11
SPART-202ENST00000438666 PABPN1Q86U42 306 aaKnown RBP eCLIP8.09□□□□□ -1.12
SPART-202ENST00000438666 CLASP1Q7Z460 1538 aa8.08□□□□□ -1.12
SPART-202ENST00000438666 SHROOM2Q13796 1616 aa8.07□□□□□ -1.12
SPART-202ENST00000438666 FAM9AQ8IZU1 332 aaPredicted RBP8.07□□□□□ -1.12
SPART-202ENST00000438666 PPRC1Q5VV67 1664 aaKnown RBP8.05□□□□□ -1.12
SPART-202ENST00000438666 EHMT2Q96KQ7 1210 aa8.05□□□□□ -1.12
SPART-202ENST00000438666 CHD1O14646 1710 aa8.02□□□□□ -1.13
SPART-202ENST00000438666 ATAD2BQ9ULI0 1458 aa7.97□□□□□ -1.13
SPART-202ENST00000438666 APLP2Q06481 763 aa7.96□□□□□ -1.14
SPART-202ENST00000438666 TRIM41Q8WV44 630 aa7.95□□□□□ -1.14
SPART-202ENST00000438666 NESP48681 1621 aa7.88□□□□□ -1.15
SPART-202ENST00000438666 RANGAP1P46060 587 aaPredicted RBP7.85□□□□□ -1.15
SPART-202ENST00000438666 EIF4G3O43432 1585 aaKnown RBP7.84□□□□□ -1.15
SPART-202ENST00000438666 UBTFP17480 764 aaKnown RBP7.82□□□□□ -1.16
SPART-202ENST00000438666 ATP1B4Q9UN42 357 aaPredicted RBP7.81□□□□□ -1.16
SPART-202ENST00000438666 ABCA5Q8WWZ7 1642 aa7.8□□□□□ -1.16
SPART-202ENST00000438666 PBRM1Q86U86 1689 aa7.8□□□□□ -1.16
SPART-202ENST00000438666 URB2Q14146 1524 aaKnown RBP7.79□□□□□ -1.16
SPART-202ENST00000438666 ARHGEF11O15085 1522 aa7.75□□□□□ -1.17
SPART-202ENST00000438666 ARAP1Q96P48 1450 aa7.74□□□□□ -1.17
SPART-202ENST00000438666 CFTRP13569 1480 aa7.72□□□□□ -1.17
SPART-202ENST00000438666 TTBK1Q5TCY1 1321 aaPredicted RBP7.71□□□□□ -1.18
SPART-202ENST00000438666 WIZO95785 1651 aa7.71□□□□□ -1.18
SPART-202ENST00000438666 MROH2BQ7Z745 1585 aa7.7□□□□□ -1.18
SPART-202ENST00000438666 MRC2Q9UBG0 1479 aa7.7□□□□□ -1.18
SPART-202ENST00000438666 SIGLEC1Q9BZZ2 1709 aa7.68□□□□□ -1.18
SPART-202ENST00000438666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.67□□□□□ -1.18
SPART-202ENST00000438666 HNRNPUL2Q1KMD3 747 aaKnown RBP7.67□□□□□ -1.18
SPART-202ENST00000438666 FBLN2P98095 1184 aa7.63□□□□□ -1.19
SPART-202ENST00000438666 MAP3K4Q9Y6R4 1608 aa7.62□□□□□ -1.19
SPART-202ENST00000438666 BIVM-ERCC5R4GMW8 1640 aa7.6□□□□□ -1.19
SPART-202ENST00000438666 CHIC1Q5VXU3 224 aa7.6□□□□□ -1.19
SPART-202ENST00000438666 MYT1LQ9UL68 1186 aa7.59□□□□□ -1.19
SPART-202ENST00000438666 RSF1Q96T23 1441 aaPredicted RBP7.58□□□□□ -1.2
SPART-202ENST00000438666 DIP2BQ9P265 1576 aa7.58□□□□□ -1.2
SPART-202ENST00000438666 TOP2AP11388 1531 aaKnown RBP7.58□□□□□ -1.2
SPART-202ENST00000438666 DNMBPQ6XZF7 1577 aa7.57□□□□□ -1.2
SPART-202ENST00000438666 BAZ1BQ9UIG0 1483 aaKnown RBP7.56□□□□□ -1.2
SPART-202ENST00000438666 MAPKBP1O60336 1514 aa7.55□□□□□ -1.2
SPART-202ENST00000438666 KDM6BO15054 1643 aa7.55□□□□□ -1.2
SPART-202ENST00000438666 ERCC6L2Q5T890 1561 aa7.54□□□□□ -1.2
SPART-202ENST00000438666 GLI2P10070 1586 aa7.52□□□□□ -1.21
SPART-202ENST00000438666 ADCY10Q96PN6 1610 aa7.52□□□□□ -1.21
SPART-202ENST00000438666 RUSC2Q8N2Y8 1516 aa7.51□□□□□ -1.21
SPART-202ENST00000438666 CEP170Q5SW79 1584 aa7.5□□□□□ -1.21
SPART-202ENST00000438666 ERCC6Q03468 1493 aa7.49□□□□□ -1.21
SPART-202ENST00000438666 TOP2BQ02880 1626 aa7.49□□□□□ -1.21
SPART-202ENST00000438666 ADAMTSL3P82987 1691 aa7.49□□□□□ -1.21
SPART-202ENST00000438666 ZNF608Q9ULD9 1512 aaPredicted RBP7.49□□□□□ -1.21
SPART-202ENST00000438666 PCGF6Q9BYE7 350 aa7.48□□□□□ -1.21
SPART-202ENST00000438666 ADAMTS12P58397 1594 aa7.47□□□□□ -1.21
SPART-202ENST00000438666 LOC105371045A0A1W2PR82 267 aa7.46□□□□□ -1.21
SPART-202ENST00000438666 PPARGC1BQ86YN6 1023 aaKnown RBP7.46□□□□□ -1.22
SPART-202ENST00000438666 CSRNP3Q8WYN3 585 aa7.44□□□□□ -1.22
SPART-202ENST00000438666 TOPBP1Q92547 1522 aa7.44□□□□□ -1.22
SPART-202ENST00000438666 ITGAEP38570 1179 aa7.44□□□□□ -1.22
SPART-202ENST00000438666 CCER1Q8TC90 406 aaPredicted RBP7.43□□□□□ -1.22
SPART-202ENST00000438666 FRMPD1Q5SYB0 1578 aa7.42□□□□□ -1.22
SPART-202ENST00000438666 CHMP7Q8WUX9 453 aaPredicted RBP7.42□□□□□ -1.22
SPART-202ENST00000438666 NPM1P06748 294 aaKnown RBP eCLIP7.41□□□□□ -1.22
SPART-202ENST00000438666 FER1L4A9Z1Z3 1794 aa7.41□□□□□ -1.22
SPART-202ENST00000438666 STRCQ7RTU9 1775 aa7.39□□□□□ -1.23
SPART-202ENST00000438666 KDM5BQ9UGL1 1544 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms