RNA–Protein interactions for RNA: ENST00000438282.6

CNTN4-209, Transcript of contactin 4, humanhuman

TSL 5

Gene CNTN4, Length 2,463 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-209ENST00000438282 NISCHQ9Y2I1 1504 aa22.94■■□□□ 1.26
CNTN4-209ENST00000438282 CCDC180Q9P1Z9 1646 aa19.93■□□□□ 0.78
CNTN4-209ENST00000438282 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
CNTN4-209ENST00000438282 SHROOM4Q9ULL8 1493 aa18.98■□□□□ 0.63
CNTN4-209ENST00000438282 DCAF1Q9Y4B6 1507 aa18.93■□□□□ 0.62
CNTN4-209ENST00000438282 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
CNTN4-209ENST00000438282 ABCC9O60706 1549 aa18.65■□□□□ 0.58
CNTN4-209ENST00000438282 MYO15BQ96JP2 1530 aa18.59■□□□□ 0.57
CNTN4-209ENST00000438282 NACADO15069 1562 aa18.46■□□□□ 0.55
CNTN4-209ENST00000438282 SCRIBQ14160 1630 aa18.42■□□□□ 0.54
CNTN4-209ENST00000438282 SUPT5HO00267 1087 aaKnown RBP18.34■□□□□ 0.53
CNTN4-209ENST00000438282 RB1CC1Q8TDY2 1594 aa18.28■□□□□ 0.52
CNTN4-209ENST00000438282 UNC13AQ9UPW8 1703 aa18■□□□□ 0.47
CNTN4-209ENST00000438282 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
CNTN4-209ENST00000438282 CECR2Q9BXF3 1484 aa17.83■□□□□ 0.45
CNTN4-209ENST00000438282 MROH2BQ7Z745 1585 aa17.77■□□□□ 0.43
CNTN4-209ENST00000438282 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
CNTN4-209ENST00000438282 BAZ1AQ9NRL2 1556 aaPredicted RBP17.71■□□□□ 0.43
CNTN4-209ENST00000438282 WIZO95785 1651 aa17.68■□□□□ 0.42
CNTN4-209ENST00000438282 CHIC1Q5VXU3 224 aa17.64■□□□□ 0.41
CNTN4-209ENST00000438282 SMARCA4P51532 1647 aa17.63■□□□□ 0.41
CNTN4-209ENST00000438282 PABPN1Q86U42 306 aaKnown RBP eCLIP17.61■□□□□ 0.41
CNTN4-209ENST00000438282 TOP2AP11388 1531 aaKnown RBP17.46■□□□□ 0.39
CNTN4-209ENST00000438282 PEG3Q9GZU2 1588 aa17.35■□□□□ 0.37
CNTN4-209ENST00000438282 SMARCA2P51531 1590 aa17.32■□□□□ 0.36
CNTN4-209ENST00000438282 EIF4G1Q04637 1599 aaKnown RBP17.29■□□□□ 0.36
CNTN4-209ENST00000438282 CCDC88BA6NC98 1476 aa17.27■□□□□ 0.36
CNTN4-209ENST00000438282 ATAD2BQ9ULI0 1458 aa17.23■□□□□ 0.35
CNTN4-209ENST00000438282 TRIM41Q8WV44 630 aa17.19■□□□□ 0.34
CNTN4-209ENST00000438282 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
CNTN4-209ENST00000438282 HMGXB3Q12766 1538 aa17.05■□□□□ 0.32
CNTN4-209ENST00000438282 ABCC8Q09428 1581 aa17.05■□□□□ 0.32
CNTN4-209ENST00000438282 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
CNTN4-209ENST00000438282 LOC105371045A0A1W2PR82 267 aa17■□□□□ 0.31
CNTN4-209ENST00000438282 FAM9AQ8IZU1 332 aaPredicted RBP16.94■□□□□ 0.3
CNTN4-209ENST00000438282 CC2D2AQ9P2K1 1620 aa16.88■□□□□ 0.29
CNTN4-209ENST00000438282 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
CNTN4-209ENST00000438282 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
CNTN4-209ENST00000438282 PRDM2Q13029 1718 aa16.77■□□□□ 0.27
CNTN4-209ENST00000438282 EHMT2Q96KQ7 1210 aa16.75■□□□□ 0.27
CNTN4-209ENST00000438282 SOGA1O94964 1423 aa16.73■□□□□ 0.27
CNTN4-209ENST00000438282 CFTRP13569 1480 aa16.72■□□□□ 0.27
CNTN4-209ENST00000438282 EEA1Q15075 1411 aa16.71■□□□□ 0.27
CNTN4-209ENST00000438282 TOP2BQ02880 1626 aa16.7■□□□□ 0.26
CNTN4-209ENST00000438282 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
CNTN4-209ENST00000438282 RUSC2Q8N2Y8 1516 aa16.67■□□□□ 0.26
CNTN4-209ENST00000438282 CADPSQ9ULU8 1353 aa16.6■□□□□ 0.25
CNTN4-209ENST00000438282 CUX1P39880 1505 aa16.6■□□□□ 0.25
CNTN4-209ENST00000438282 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.25
CNTN4-209ENST00000438282 KIF21BO75037 1637 aa16.54■□□□□ 0.24
CNTN4-209ENST00000438282 GOLGA3Q08378 1498 aa16.53■□□□□ 0.24
CNTN4-209ENST00000438282 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
CNTN4-209ENST00000438282 PCGF6Q9BYE7 350 aa16.5■□□□□ 0.23
CNTN4-209ENST00000438282 TNIKQ9UKE5 1360 aa16.49■□□□□ 0.23
CNTN4-209ENST00000438282 FANCD2Q9BXW9 1451 aa16.46■□□□□ 0.23
CNTN4-209ENST00000438282 CEP162Q5TB80 1403 aa16.46■□□□□ 0.23
CNTN4-209ENST00000438282 NESP48681 1621 aa16.45■□□□□ 0.22
CNTN4-209ENST00000438282 LAMC3Q9Y6N6 1575 aa16.44■□□□□ 0.22
CNTN4-209ENST00000438282 UBTFP17480 764 aaKnown RBP16.44■□□□□ 0.22
CNTN4-209ENST00000438282 TRIM26Q12899 539 aaPredicted RBP16.4■□□□□ 0.22
CNTN4-209ENST00000438282 FGD5Q6ZNL6 1462 aa16.39■□□□□ 0.21
CNTN4-209ENST00000438282 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
CNTN4-209ENST00000438282 RAPGEF2Q9Y4G8 1499 aa16.38■□□□□ 0.21
CNTN4-209ENST00000438282 DNMBPQ6XZF7 1577 aa16.38■□□□□ 0.21
CNTN4-209ENST00000438282 ERICH3Q5RHP9 1530 aa16.35■□□□□ 0.21
CNTN4-209ENST00000438282 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
CNTN4-209ENST00000438282 PRXQ9BXM0 1461 aa16.33■□□□□ 0.2
CNTN4-209ENST00000438282 CUX2O14529 1486 aa16.32■□□□□ 0.2
CNTN4-209ENST00000438282 TOPBP1Q92547 1522 aa16.32■□□□□ 0.2
CNTN4-209ENST00000438282 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
CNTN4-209ENST00000438282 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
CNTN4-209ENST00000438282 CLIP1P30622 1438 aa16.27■□□□□ 0.2
CNTN4-209ENST00000438282 POLA1P09884 1462 aaPredicted RBP16.25■□□□□ 0.19
CNTN4-209ENST00000438282 URB2Q14146 1524 aaKnown RBP16.25■□□□□ 0.19
CNTN4-209ENST00000438282 PPARGC1BQ86YN6 1023 aaKnown RBP16.24■□□□□ 0.19
CNTN4-209ENST00000438282 RAD54L2Q9Y4B4 1467 aa16.22■□□□□ 0.19
CNTN4-209ENST00000438282 ABCA10Q8WWZ4 1543 aa16.21■□□□□ 0.19
CNTN4-209ENST00000438282 WDR97A6NE52 1622 aa16.21■□□□□ 0.19
CNTN4-209ENST00000438282 HRCP23327 699 aa16.21■□□□□ 0.18
CNTN4-209ENST00000438282 IGF1RP08069 1367 aa16.18■□□□□ 0.18
CNTN4-209ENST00000438282 RANGAP1P46060 587 aaPredicted RBP16.16■□□□□ 0.18
CNTN4-209ENST00000438282 VPS8Q8N3P4 1428 aa16.16■□□□□ 0.18
CNTN4-209ENST00000438282 CARMIL1Q5VZK9 1371 aa16.14■□□□□ 0.17
CNTN4-209ENST00000438282 CUL7Q14999 1698 aa16.12■□□□□ 0.17
CNTN4-209ENST00000438282 ABCA5Q8WWZ7 1642 aa16.1■□□□□ 0.17
CNTN4-209ENST00000438282 TTBK1Q5TCY1 1321 aaPredicted RBP16.1■□□□□ 0.17
CNTN4-209ENST00000438282 ARAP1Q96P48 1450 aa16.1■□□□□ 0.17
CNTN4-209ENST00000438282 MRC2Q9UBG0 1479 aa16.09■□□□□ 0.17
CNTN4-209ENST00000438282 TARBP1Q13395 1621 aaKnown RBP16.06■□□□□ 0.16
CNTN4-209ENST00000438282 ARHGAP35Q9NRY4 1499 aa16.03■□□□□ 0.16
CNTN4-209ENST00000438282 CTTNBP2Q8WZ74 1663 aa16.02■□□□□ 0.16
CNTN4-209ENST00000438282 GAPVD1Q14C86 1478 aa16.02■□□□□ 0.16
CNTN4-209ENST00000438282 TDRD9Q8NDG6 1382 aaKnown RBP16.01■□□□□ 0.15
CNTN4-209ENST00000438282 PBRM1Q86U86 1689 aa16■□□□□ 0.15
CNTN4-209ENST00000438282 APLP2Q06481 763 aa16■□□□□ 0.15
CNTN4-209ENST00000438282 WDR62O43379 1518 aa16■□□□□ 0.15
CNTN4-209ENST00000438282 ERCC6Q03468 1493 aa15.96■□□□□ 0.15
CNTN4-209ENST00000438282 THOC2Q8NI27 1593 aaKnown RBP15.93■□□□□ 0.14
CNTN4-209ENST00000438282 IFT140Q96RY7 1462 aa15.91■□□□□ 0.14
CNTN4-209ENST00000438282 EFCAB5A4FU69 1503 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms