RNA–Protein interactions for RNA: ENST00000437699.3

TRPM3-216, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 3

Gene TRPM3, Length 400 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-216ENST00000437699 AEBP2Q6ZN18 517 aaPredicted RBP14.05□□□□□ -0.16
TRPM3-216ENST00000437699 NISCHQ9Y2I1 1504 aa14□□□□□ -0.17
TRPM3-216ENST00000437699 CHIC1Q5VXU3 224 aa13.56□□□□□ -0.24
TRPM3-216ENST00000437699 ABCC9O60706 1549 aa12.83□□□□□ -0.36
TRPM3-216ENST00000437699 CCDC180Q9P1Z9 1646 aa12.62□□□□□ -0.39
TRPM3-216ENST00000437699 DNAJC5BQ9UF47 199 aa12.24□□□□□ -0.45
TRPM3-216ENST00000437699 RB1CC1Q8TDY2 1594 aa12.07□□□□□ -0.48
TRPM3-216ENST00000437699 SENP3Q9H4L4 574 aaPredicted RBP11.98□□□□□ -0.49
TRPM3-216ENST00000437699 NACADO15069 1562 aa11.95□□□□□ -0.5
TRPM3-216ENST00000437699 PABPN1Q86U42 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRPM3-216ENST00000437699 UNC13AQ9UPW8 1703 aa11.9□□□□□ -0.5
TRPM3-216ENST00000437699 PHF23Q9BUL5 403 aaPredicted RBP11.88□□□□□ -0.51
TRPM3-216ENST00000437699 DCAF8L2P0C7V8 631 aa11.87□□□□□ -0.51
TRPM3-216ENST00000437699 BICRAQ9NZM4 1560 aa11.82□□□□□ -0.52
TRPM3-216ENST00000437699 MYO15BQ96JP2 1530 aa11.71□□□□□ -0.53
TRPM3-216ENST00000437699 CC2D2AQ9P2K1 1620 aa11.57□□□□□ -0.56
TRPM3-216ENST00000437699 ZCCHC6Q5VYS8 1495 aaKnown RBP11.57□□□□□ -0.56
TRPM3-216ENST00000437699 CECR2Q9BXF3 1484 aa11.54□□□□□ -0.56
TRPM3-216ENST00000437699 SHROOM4Q9ULL8 1493 aa11.54□□□□□ -0.56
TRPM3-216ENST00000437699 SCRIBQ14160 1630 aa11.53□□□□□ -0.56
TRPM3-216ENST00000437699 DCAF1Q9Y4B6 1507 aa11.51□□□□□ -0.57
TRPM3-216ENST00000437699 EIF4G1Q04637 1599 aaKnown RBP11.5□□□□□ -0.57
TRPM3-216ENST00000437699 DNAJC5Q9H3Z4 198 aa11.28□□□□□ -0.6
TRPM3-216ENST00000437699 FOXD1Q16676 465 aa11.1□□□□□ -0.63
TRPM3-216ENST00000437699 CUX2O14529 1486 aa11.06□□□□□ -0.64
TRPM3-216ENST00000437699 NCAPD3P42695 1498 aa11.05□□□□□ -0.64
TRPM3-216ENST00000437699 ERCC6Q03468 1493 aa11.04□□□□□ -0.64
TRPM3-216ENST00000437699 ATAD2BQ9ULI0 1458 aa11.01□□□□□ -0.65
TRPM3-216ENST00000437699 NESP48681 1621 aa11□□□□□ -0.65
TRPM3-216ENST00000437699 SMARCA4P51532 1647 aa10.97□□□□□ -0.65
TRPM3-216ENST00000437699 HMGXB3Q12766 1538 aa10.94□□□□□ -0.66
TRPM3-216ENST00000437699 PLPPR3Q6T4P5 718 aa10.93□□□□□ -0.66
TRPM3-216ENST00000437699 SMARCA2P51531 1590 aa10.93□□□□□ -0.66
TRPM3-216ENST00000437699 THOC2Q8NI27 1593 aaKnown RBP10.9□□□□□ -0.67
TRPM3-216ENST00000437699 BAZ1BQ9UIG0 1483 aaKnown RBP10.87□□□□□ -0.67
TRPM3-216ENST00000437699 BAZ1AQ9NRL2 1556 aaPredicted RBP10.85□□□□□ -0.67
TRPM3-216ENST00000437699 PEG3Q9GZU2 1588 aa10.84□□□□□ -0.67
TRPM3-216ENST00000437699 KIF21AQ7Z4S6 1674 aa10.84□□□□□ -0.67
TRPM3-216ENST00000437699 MROH2BQ7Z745 1585 aa10.82□□□□□ -0.68
TRPM3-216ENST00000437699 LAMC3Q9Y6N6 1575 aa10.82□□□□□ -0.68
TRPM3-216ENST00000437699 PDS5BQ9NTI5 1447 aa10.73□□□□□ -0.69
TRPM3-216ENST00000437699 TRIM41Q8WV44 630 aa10.71□□□□□ -0.69
TRPM3-216ENST00000437699 CADPSQ9ULU8 1353 aa10.69□□□□□ -0.7
TRPM3-216ENST00000437699 WIZO95785 1651 aa10.69□□□□□ -0.7
TRPM3-216ENST00000437699 MRC2Q9UBG0 1479 aa10.68□□□□□ -0.7
TRPM3-216ENST00000437699 WDR62O43379 1518 aa10.68□□□□□ -0.7
TRPM3-216ENST00000437699 CEP164Q9UPV0 1460 aa10.61□□□□□ -0.71
TRPM3-216ENST00000437699 FANCD2Q9BXW9 1451 aa10.59□□□□□ -0.71
TRPM3-216ENST00000437699 CFTRP13569 1480 aa10.55□□□□□ -0.72
TRPM3-216ENST00000437699 URB2Q14146 1524 aaKnown RBP10.55□□□□□ -0.72
TRPM3-216ENST00000437699 OSCARQ8IYS5 282 aa10.52□□□□□ -0.73
TRPM3-216ENST00000437699 RSF1Q96T23 1441 aaPredicted RBP10.51□□□□□ -0.73
TRPM3-216ENST00000437699 PPP6R1Q9UPN7 881 aa10.51□□□□□ -0.73
TRPM3-216ENST00000437699 TOP2AP11388 1531 aaKnown RBP10.49□□□□□ -0.73
TRPM3-216ENST00000437699 ADRA2BP18089 450 aa10.49□□□□□ -0.73
TRPM3-216ENST00000437699 RIMBP3CA6NJZ7 1639 aa10.47□□□□□ -0.73
TRPM3-216ENST00000437699 RIMBP3BA6NNM3 1639 aa10.47□□□□□ -0.73
TRPM3-216ENST00000437699 RIMBP3Q9UFD9 1639 aa10.47□□□□□ -0.73
TRPM3-216ENST00000437699 ZNF608Q9ULD9 1512 aaPredicted RBP10.46□□□□□ -0.74
TRPM3-216ENST00000437699 PRDM2Q13029 1718 aa10.44□□□□□ -0.74
TRPM3-216ENST00000437699 PIAS4Q8N2W9 510 aaPredicted RBP10.43□□□□□ -0.74
TRPM3-216ENST00000437699 ARHGEF11O15085 1522 aa10.4□□□□□ -0.74
TRPM3-216ENST00000437699 CCDC88BA6NC98 1476 aa10.4□□□□□ -0.74
TRPM3-216ENST00000437699 TOPBP1Q92547 1522 aa10.38□□□□□ -0.75
TRPM3-216ENST00000437699 IFT140Q96RY7 1462 aa10.38□□□□□ -0.75
TRPM3-216ENST00000437699 EIF4G3O43432 1585 aaKnown RBP10.37□□□□□ -0.75
TRPM3-216ENST00000437699 MSH5O43196 834 aa10.35□□□□□ -0.75
TRPM3-216ENST00000437699 CHD1O14646 1710 aa10.35□□□□□ -0.75
TRPM3-216ENST00000437699 TARBP1Q13395 1621 aaKnown RBP10.33□□□□□ -0.76
TRPM3-216ENST00000437699 AQRO60306 1485 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRPM3-216ENST00000437699 CYB5RLQ6IPT4 315 aa10.32□□□□□ -0.76
TRPM3-216ENST00000437699 DNMBPQ6XZF7 1577 aa10.31□□□□□ -0.76
TRPM3-216ENST00000437699 ARAP1Q96P48 1450 aa10.3□□□□□ -0.76
TRPM3-216ENST00000437699 ABCC8Q09428 1581 aa10.28□□□□□ -0.76
TRPM3-216ENST00000437699 POLA1P09884 1462 aaPredicted RBP10.27□□□□□ -0.77
TRPM3-216ENST00000437699 RAD54L2Q9Y4B4 1467 aa10.26□□□□□ -0.77
TRPM3-216ENST00000437699 FBLN2P98095 1184 aa10.24□□□□□ -0.77
TRPM3-216ENST00000437699 TRHP20396 242 aaPredicted RBP10.23□□□□□ -0.77
TRPM3-216ENST00000437699 TDRD9Q8NDG6 1382 aaKnown RBP10.23□□□□□ -0.77
TRPM3-216ENST00000437699 SNAPC4Q5SXM2 1469 aa10.2□□□□□ -0.78
TRPM3-216ENST00000437699 CLASP1Q7Z460 1538 aa10.2□□□□□ -0.78
TRPM3-216ENST00000437699 SOGA1O94964 1423 aa10.19□□□□□ -0.78
TRPM3-216ENST00000437699 FGD5Q6ZNL6 1462 aa10.18□□□□□ -0.78
TRPM3-216ENST00000437699 CUX1P39880 1505 aa10.17□□□□□ -0.78
TRPM3-216ENST00000437699 WDR97A6NE52 1622 aa10.16□□□□□ -0.78
TRPM3-216ENST00000437699 SYNJ1O43426 1573 aa10.15□□□□□ -0.78
TRPM3-216ENST00000437699 MAGI1Q96QZ7 1491 aaPredicted RBP10.12□□□□□ -0.79
TRPM3-216ENST00000437699 CHMP7Q8WUX9 453 aaPredicted RBP10.12□□□□□ -0.79
TRPM3-216ENST00000437699 GRIN2BQ13224 1484 aa10.11□□□□□ -0.79
TRPM3-216ENST00000437699 PBRM1Q86U86 1689 aa10.11□□□□□ -0.79
TRPM3-216ENST00000437699 SYNJ2O15056 1496 aa10.1□□□□□ -0.79
TRPM3-216ENST00000437699 ERCC6L2Q5T890 1561 aa10.09□□□□□ -0.79
TRPM3-216ENST00000437699 GAPVD1Q14C86 1478 aa10.08□□□□□ -0.8
TRPM3-216ENST00000437699 ABCA5Q8WWZ7 1642 aa10.07□□□□□ -0.8
TRPM3-216ENST00000437699 ABCA10Q8WWZ4 1543 aa10.04□□□□□ -0.8
TRPM3-216ENST00000437699 CEP170Q5SW79 1584 aa10.01□□□□□ -0.81
TRPM3-216ENST00000437699 GRIN2AQ12879 1464 aa10□□□□□ -0.81
TRPM3-216ENST00000437699 ADAMTS12P58397 1594 aa9.99□□□□□ -0.81
TRPM3-216ENST00000437699 NUP160Q12769 1436 aa9.99□□□□□ -0.81
TRPM3-216ENST00000437699 SHROOM2Q13796 1616 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms