RNA–Protein interactions for RNA: ENST00000437447.1

PHBP4-201, Transcript of prohibitin pseudogene 4, humanhuman

BASIC

Gene PHBP4, Length 837 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHBP4-201ENST00000437447 NISCHQ9Y2I1 1504 aa19.76■□□□□ 0.75
PHBP4-201ENST00000437447 ABCC9O60706 1549 aa18.38■□□□□ 0.53
PHBP4-201ENST00000437447 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
PHBP4-201ENST00000437447 DNAJC5BQ9UF47 199 aa17.61■□□□□ 0.41
PHBP4-201ENST00000437447 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
PHBP4-201ENST00000437447 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
PHBP4-201ENST00000437447 PABPN1Q86U42 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
PHBP4-201ENST00000437447 DCAF8L2P0C7V8 631 aa17■□□□□ 0.31
PHBP4-201ENST00000437447 NACADO15069 1562 aa16.95■□□□□ 0.3
PHBP4-201ENST00000437447 UNC13AQ9UPW8 1703 aa16.93■□□□□ 0.3
PHBP4-201ENST00000437447 BICRAQ9NZM4 1560 aa16.78■□□□□ 0.28
PHBP4-201ENST00000437447 CHIC1Q5VXU3 224 aa16.76■□□□□ 0.27
PHBP4-201ENST00000437447 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
PHBP4-201ENST00000437447 CECR2Q9BXF3 1484 aa16.53■□□□□ 0.24
PHBP4-201ENST00000437447 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
PHBP4-201ENST00000437447 SCRIBQ14160 1630 aa16.39■□□□□ 0.21
PHBP4-201ENST00000437447 EIF4G1Q04637 1599 aaKnown RBP16.37■□□□□ 0.21
PHBP4-201ENST00000437447 DNAJC5Q9H3Z4 198 aa16.32■□□□□ 0.2
PHBP4-201ENST00000437447 ZCCHC6Q5VYS8 1495 aaKnown RBP16.29■□□□□ 0.2
PHBP4-201ENST00000437447 SHROOM4Q9ULL8 1493 aa16.29■□□□□ 0.2
PHBP4-201ENST00000437447 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
PHBP4-201ENST00000437447 CUX2O14529 1486 aa15.84■□□□□ 0.13
PHBP4-201ENST00000437447 ERCC6Q03468 1493 aa15.83■□□□□ 0.12
PHBP4-201ENST00000437447 NESP48681 1621 aa15.7■□□□□ 0.1
PHBP4-201ENST00000437447 NCAPD3P42695 1498 aa15.66■□□□□ 0.1
PHBP4-201ENST00000437447 ATAD2BQ9ULI0 1458 aa15.62■□□□□ 0.09
PHBP4-201ENST00000437447 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
PHBP4-201ENST00000437447 THOC2Q8NI27 1593 aaKnown RBP15.53■□□□□ 0.08
PHBP4-201ENST00000437447 SMARCA4P51532 1647 aa15.52■□□□□ 0.08
PHBP4-201ENST00000437447 SMARCA2P51531 1590 aa15.5■□□□□ 0.07
PHBP4-201ENST00000437447 HMGXB3Q12766 1538 aa15.5■□□□□ 0.07
PHBP4-201ENST00000437447 KIF21AQ7Z4S6 1674 aa15.46■□□□□ 0.07
PHBP4-201ENST00000437447 BAZ1BQ9UIG0 1483 aaKnown RBP15.44■□□□□ 0.06
PHBP4-201ENST00000437447 LAMC3Q9Y6N6 1575 aa15.37■□□□□ 0.05
PHBP4-201ENST00000437447 BAZ1AQ9NRL2 1556 aaPredicted RBP15.33■□□□□ 0.05
PHBP4-201ENST00000437447 MROH2BQ7Z745 1585 aa15.3■□□□□ 0.04
PHBP4-201ENST00000437447 PDS5BQ9NTI5 1447 aa15.29■□□□□ 0.04
PHBP4-201ENST00000437447 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
PHBP4-201ENST00000437447 MRC2Q9UBG0 1479 aa15.23■□□□□ 0.03
PHBP4-201ENST00000437447 CADPSQ9ULU8 1353 aa15.2■□□□□ 0.02
PHBP4-201ENST00000437447 WDR62O43379 1518 aa15.19■□□□□ 0.02
PHBP4-201ENST00000437447 WIZO95785 1651 aa15.12■□□□□ 0.01
PHBP4-201ENST00000437447 CEP164Q9UPV0 1460 aa15.09■□□□□ 0.01
PHBP4-201ENST00000437447 OSCARQ8IYS5 282 aa15.09■□□□□ 0.01
PHBP4-201ENST00000437447 FANCD2Q9BXW9 1451 aa15.07■□□□□ 0
PHBP4-201ENST00000437447 RIMBP3CA6NJZ7 1639 aa15.02□□□□□ -0.01
PHBP4-201ENST00000437447 RIMBP3BA6NNM3 1639 aa15.02□□□□□ -0.01
PHBP4-201ENST00000437447 RIMBP3Q9UFD9 1639 aa15.02□□□□□ -0.01
PHBP4-201ENST00000437447 URB2Q14146 1524 aaKnown RBP15□□□□□ -0.01
PHBP4-201ENST00000437447 CFTRP13569 1480 aa14.94□□□□□ -0.02
PHBP4-201ENST00000437447 ZNF608Q9ULD9 1512 aaPredicted RBP14.91□□□□□ -0.02
PHBP4-201ENST00000437447 ARHGEF11O15085 1522 aa14.9□□□□□ -0.02
PHBP4-201ENST00000437447 CYB5RLQ6IPT4 315 aa14.86□□□□□ -0.03
PHBP4-201ENST00000437447 TRHP20396 242 aaPredicted RBP14.83□□□□□ -0.04
PHBP4-201ENST00000437447 TOP2AP11388 1531 aaKnown RBP14.81□□□□□ -0.04
PHBP4-201ENST00000437447 RSF1Q96T23 1441 aaPredicted RBP14.8□□□□□ -0.04
PHBP4-201ENST00000437447 PRDM2Q13029 1718 aa14.78□□□□□ -0.04
PHBP4-201ENST00000437447 IFT140Q96RY7 1462 aa14.77□□□□□ -0.04
PHBP4-201ENST00000437447 CHD1O14646 1710 aa14.77□□□□□ -0.05
PHBP4-201ENST00000437447 EIF4G3O43432 1585 aaKnown RBP14.76□□□□□ -0.05
PHBP4-201ENST00000437447 ARAP1Q96P48 1450 aa14.75□□□□□ -0.05
PHBP4-201ENST00000437447 TOPBP1Q92547 1522 aa14.74□□□□□ -0.05
PHBP4-201ENST00000437447 FBLN2P98095 1184 aa14.72□□□□□ -0.05
PHBP4-201ENST00000437447 AQRO60306 1485 aaKnown RBP eCLIP14.71□□□□□ -0.05
PHBP4-201ENST00000437447 PHF23Q9BUL5 403 aaPredicted RBP14.69□□□□□ -0.06
PHBP4-201ENST00000437447 CCDC88BA6NC98 1476 aa14.69□□□□□ -0.06
PHBP4-201ENST00000437447 TARBP1Q13395 1621 aaKnown RBP14.63□□□□□ -0.07
PHBP4-201ENST00000437447 SENP3Q9H4L4 574 aaPredicted RBP14.63□□□□□ -0.07
PHBP4-201ENST00000437447 DNMBPQ6XZF7 1577 aa14.62□□□□□ -0.07
PHBP4-201ENST00000437447 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
PHBP4-201ENST00000437447 POLA1P09884 1462 aaPredicted RBP14.57□□□□□ -0.08
PHBP4-201ENST00000437447 TDRD9Q8NDG6 1382 aaKnown RBP14.56□□□□□ -0.08
PHBP4-201ENST00000437447 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
PHBP4-201ENST00000437447 SNAPC4Q5SXM2 1469 aa14.53□□□□□ -0.08
PHBP4-201ENST00000437447 CLASP1Q7Z460 1538 aa14.51□□□□□ -0.09
PHBP4-201ENST00000437447 SOGA1O94964 1423 aa14.49□□□□□ -0.09
PHBP4-201ENST00000437447 CHMP7Q8WUX9 453 aaPredicted RBP14.47□□□□□ -0.09
PHBP4-201ENST00000437447 SYNJ1O43426 1573 aa14.45□□□□□ -0.1
PHBP4-201ENST00000437447 FGD5Q6ZNL6 1462 aa14.44□□□□□ -0.1
PHBP4-201ENST00000437447 GAPVD1Q14C86 1478 aa14.39□□□□□ -0.11
PHBP4-201ENST00000437447 CUX1P39880 1505 aa14.39□□□□□ -0.11
PHBP4-201ENST00000437447 MAGI1Q96QZ7 1491 aaPredicted RBP14.38□□□□□ -0.11
PHBP4-201ENST00000437447 ERCC6L2Q5T890 1561 aa14.38□□□□□ -0.11
PHBP4-201ENST00000437447 GRIN2BQ13224 1484 aa14.38□□□□□ -0.11
PHBP4-201ENST00000437447 PBRM1Q86U86 1689 aa14.36□□□□□ -0.11
PHBP4-201ENST00000437447 SYNJ2O15056 1496 aa14.36□□□□□ -0.11
PHBP4-201ENST00000437447 WDR97A6NE52 1622 aa14.34□□□□□ -0.11
PHBP4-201ENST00000437447 ABCA5Q8WWZ7 1642 aa14.24□□□□□ -0.13
PHBP4-201ENST00000437447 KIF13AQ9H1H9 1805 aa14.24□□□□□ -0.13
PHBP4-201ENST00000437447 CEP170Q5SW79 1584 aa14.23□□□□□ -0.13
PHBP4-201ENST00000437447 GRIN2AQ12879 1464 aa14.21□□□□□ -0.13
PHBP4-201ENST00000437447 ABCA10Q8WWZ4 1543 aa14.19□□□□□ -0.14
PHBP4-201ENST00000437447 ADAMTS12P58397 1594 aa14.17□□□□□ -0.14
PHBP4-201ENST00000437447 NUP160Q12769 1436 aa14.15□□□□□ -0.14
PHBP4-201ENST00000437447 SHROOM2Q13796 1616 aa14.14□□□□□ -0.15
PHBP4-201ENST00000437447 FAM69CQ0P6D2 419 aa14.1□□□□□ -0.15
PHBP4-201ENST00000437447 PRG4Q92954 1404 aaPredicted RBP14.09□□□□□ -0.15
PHBP4-201ENST00000437447 KDM4FA0A1W2PPD8 638 aa14.09□□□□□ -0.15
PHBP4-201ENST00000437447 ILDR1Q86SU0 546 aaPredicted RBP14.07□□□□□ -0.16
PHBP4-201ENST00000437447 TSPOAP1O95153 1857 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms