RNA–Protein interactions for RNA: ENST00000437276.1

NR1H3-210, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-210ENST00000437276 NISCHQ9Y2I1 1504 aa37.05■■■■□ 3.52
NR1H3-210ENST00000437276 CCDC180Q9P1Z9 1646 aa33.03■■■□□ 2.88
NR1H3-210ENST00000437276 ABCC9O60706 1549 aa32.91■■■□□ 2.86
NR1H3-210ENST00000437276 RB1CC1Q8TDY2 1594 aa31.41■■■□□ 2.62
NR1H3-210ENST00000437276 NACADO15069 1562 aa31.21■■■□□ 2.59
NR1H3-210ENST00000437276 DCAF8L2P0C7V8 631 aa30.93■■■□□ 2.54
NR1H3-210ENST00000437276 ZCCHC6Q5VYS8 1495 aaKnown RBP30.9■■■□□ 2.54
NR1H3-210ENST00000437276 DNAJC5BQ9UF47 199 aa30.88■■■□□ 2.53
NR1H3-210ENST00000437276 MYO15BQ96JP2 1530 aa30.8■■■□□ 2.52
NR1H3-210ENST00000437276 UNC13AQ9UPW8 1703 aa30.74■■■□□ 2.51
NR1H3-210ENST00000437276 DCAF1Q9Y4B6 1507 aa30.67■■■□□ 2.5
NR1H3-210ENST00000437276 PABPN1Q86U42 306 aaKnown RBP eCLIP30.61■■■□□ 2.49
NR1H3-210ENST00000437276 BICRAQ9NZM4 1560 aa30.47■■■□□ 2.47
NR1H3-210ENST00000437276 SHROOM4Q9ULL8 1493 aa30.12■■■□□ 2.41
NR1H3-210ENST00000437276 SCRIBQ14160 1630 aa30.01■■■□□ 2.39
NR1H3-210ENST00000437276 CC2D2AQ9P2K1 1620 aa29.78■■■□□ 2.36
NR1H3-210ENST00000437276 EIF4G1Q04637 1599 aaKnown RBP29.72■■■□□ 2.35
NR1H3-210ENST00000437276 CECR2Q9BXF3 1484 aa29.68■■■□□ 2.34
NR1H3-210ENST00000437276 NCAPD3P42695 1498 aa28.79■■■□□ 2.2
NR1H3-210ENST00000437276 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
NR1H3-210ENST00000437276 BAZ1AQ9NRL2 1556 aaPredicted RBP28.72■■■□□ 2.19
NR1H3-210ENST00000437276 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
NR1H3-210ENST00000437276 SMARCA2P51531 1590 aa28.62■■■□□ 2.17
NR1H3-210ENST00000437276 HMGXB3Q12766 1538 aa28.58■■■□□ 2.17
NR1H3-210ENST00000437276 MROH2BQ7Z745 1585 aa28.54■■■□□ 2.16
NR1H3-210ENST00000437276 CUX2O14529 1486 aa28.43■■■□□ 2.14
NR1H3-210ENST00000437276 ERCC6Q03468 1493 aa28.43■■■□□ 2.14
NR1H3-210ENST00000437276 DNAJC5Q9H3Z4 198 aa28.43■■■□□ 2.14
NR1H3-210ENST00000437276 PEG3Q9GZU2 1588 aa28.42■■■□□ 2.14
NR1H3-210ENST00000437276 BAZ1BQ9UIG0 1483 aaKnown RBP28.38■■■□□ 2.13
NR1H3-210ENST00000437276 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
NR1H3-210ENST00000437276 WIZO95785 1651 aa28.28■■■□□ 2.12
NR1H3-210ENST00000437276 NESP48681 1621 aa28.26■■■□□ 2.11
NR1H3-210ENST00000437276 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
NR1H3-210ENST00000437276 THOC2Q8NI27 1593 aaKnown RBP28.03■■■□□ 2.08
NR1H3-210ENST00000437276 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
NR1H3-210ENST00000437276 PDS5BQ9NTI5 1447 aa27.98■■■□□ 2.07
NR1H3-210ENST00000437276 KIF21AQ7Z4S6 1674 aa27.97■■■□□ 2.07
NR1H3-210ENST00000437276 CADPSQ9ULU8 1353 aa27.89■■■□□ 2.06
NR1H3-210ENST00000437276 SUPT5HO00267 1087 aaKnown RBP27.74■■■□□ 2.03
NR1H3-210ENST00000437276 MRC2Q9UBG0 1479 aa27.7■■■□□ 2.03
NR1H3-210ENST00000437276 WDR62O43379 1518 aa27.65■■■□□ 2.02
NR1H3-210ENST00000437276 CCDC88BA6NC98 1476 aa27.63■■■□□ 2.01
NR1H3-210ENST00000437276 CEP164Q9UPV0 1460 aa27.59■■■□□ 2.01
NR1H3-210ENST00000437276 CFTRP13569 1480 aa27.58■■■□□ 2.01
NR1H3-210ENST00000437276 FANCD2Q9BXW9 1451 aa27.56■■■□□ 2
NR1H3-210ENST00000437276 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
NR1H3-210ENST00000437276 URB2Q14146 1524 aaKnown RBP27.32■■□□□ 1.96
NR1H3-210ENST00000437276 OSCARQ8IYS5 282 aa27.13■■□□□ 1.93
NR1H3-210ENST00000437276 TRIM41Q8WV44 630 aa27.09■■□□□ 1.93
NR1H3-210ENST00000437276 ABCC8Q09428 1581 aa27.05■■□□□ 1.92
NR1H3-210ENST00000437276 IFT140Q96RY7 1462 aa27.05■■□□□ 1.92
NR1H3-210ENST00000437276 TOPBP1Q92547 1522 aa27.04■■□□□ 1.92
NR1H3-210ENST00000437276 ZNF608Q9ULD9 1512 aaPredicted RBP26.96■■□□□ 1.91
NR1H3-210ENST00000437276 DNMBPQ6XZF7 1577 aa26.96■■□□□ 1.91
NR1H3-210ENST00000437276 EIF4G3O43432 1585 aaKnown RBP26.85■■□□□ 1.89
NR1H3-210ENST00000437276 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.89
NR1H3-210ENST00000437276 RIMBP3CA6NJZ7 1639 aa26.77■■□□□ 1.88
NR1H3-210ENST00000437276 RIMBP3BA6NNM3 1639 aa26.77■■□□□ 1.88
NR1H3-210ENST00000437276 RIMBP3Q9UFD9 1639 aa26.77■■□□□ 1.88
NR1H3-210ENST00000437276 CUX1P39880 1505 aa26.77■■□□□ 1.88
NR1H3-210ENST00000437276 POLA1P09884 1462 aaPredicted RBP26.75■■□□□ 1.87
NR1H3-210ENST00000437276 AQRO60306 1485 aaKnown RBP eCLIP26.74■■□□□ 1.877e-8■■■■□ 25.8
NR1H3-210ENST00000437276 CHD1O14646 1710 aa26.69■■□□□ 1.86
NR1H3-210ENST00000437276 WRNQ14191 1432 aaPredicted RBP eCLIP26.69■■□□□ 1.86
NR1H3-210ENST00000437276 ARHGEF11O15085 1522 aa26.67■■□□□ 1.86
NR1H3-210ENST00000437276 FGD5Q6ZNL6 1462 aa26.67■■□□□ 1.86
NR1H3-210ENST00000437276 SOGA1O94964 1423 aa26.65■■□□□ 1.86
NR1H3-210ENST00000437276 BIVM-ERCC5R4GMW8 1640 aa26.64■■□□□ 1.85
NR1H3-210ENST00000437276 RAD54L2Q9Y4B4 1467 aa26.63■■□□□ 1.85
NR1H3-210ENST00000437276 TOP2BQ02880 1626 aa26.62■■□□□ 1.85
NR1H3-210ENST00000437276 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
NR1H3-210ENST00000437276 SYNJ1O43426 1573 aa26.61■■□□□ 1.85
NR1H3-210ENST00000437276 TDRD9Q8NDG6 1382 aaKnown RBP26.56■■□□□ 1.84
NR1H3-210ENST00000437276 FBLN2P98095 1184 aa26.55■■□□□ 1.84
NR1H3-210ENST00000437276 CYB5RLQ6IPT4 315 aa26.46■■□□□ 1.83
NR1H3-210ENST00000437276 SNAPC4Q5SXM2 1469 aa26.45■■□□□ 1.82
NR1H3-210ENST00000437276 MAGI1Q96QZ7 1491 aaPredicted RBP26.44■■□□□ 1.82
NR1H3-210ENST00000437276 GRIN2BQ13224 1484 aa26.42■■□□□ 1.82
NR1H3-210ENST00000437276 ABCA10Q8WWZ4 1543 aa26.41■■□□□ 1.82
NR1H3-210ENST00000437276 CHMP7Q8WUX9 453 aaPredicted RBP26.39■■□□□ 1.82
NR1H3-210ENST00000437276 ARAP1Q96P48 1450 aa26.38■■□□□ 1.81
NR1H3-210ENST00000437276 CLASP1Q7Z460 1538 aa26.36■■□□□ 1.81
NR1H3-210ENST00000437276 PBRM1Q86U86 1689 aa26.35■■□□□ 1.81
NR1H3-210ENST00000437276 SYNJ2O15056 1496 aa26.34■■□□□ 1.81
NR1H3-210ENST00000437276 GAPVD1Q14C86 1478 aa26.32■■□□□ 1.8
NR1H3-210ENST00000437276 ABCA5Q8WWZ7 1642 aa26.31■■□□□ 1.8
NR1H3-210ENST00000437276 TRHP20396 242 aaPredicted RBP26.16■■□□□ 1.78
NR1H3-210ENST00000437276 KIF27Q86VH2 1401 aa26.13■■□□□ 1.77
NR1H3-210ENST00000437276 ERICH3Q5RHP9 1530 aa26.11■■□□□ 1.77
NR1H3-210ENST00000437276 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
NR1H3-210ENST00000437276 ADAMTS12P58397 1594 aa26.05■■□□□ 1.76
NR1H3-210ENST00000437276 FHAD1B1AJZ9 1412 aa25.99■■□□□ 1.75
NR1H3-210ENST00000437276 NUP160Q12769 1436 aa25.99■■□□□ 1.75
NR1H3-210ENST00000437276 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
NR1H3-210ENST00000437276 CEP170Q5SW79 1584 aa25.97■■□□□ 1.75
NR1H3-210ENST00000437276 CUL7Q14999 1698 aa25.95■■□□□ 1.74
NR1H3-210ENST00000437276 IGF1RP08069 1367 aa25.95■■□□□ 1.74
NR1H3-210ENST00000437276 SHROOM2Q13796 1616 aa25.92■■□□□ 1.74
NR1H3-210ENST00000437276 RUSC2Q8N2Y8 1516 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms