RNA–Protein interactions for RNA: ENST00000436852.2

RPL3P12-201, Transcript of ribosomal protein L3 pseudogene 12, humanhuman

BASIC

Gene RPL3P12, Length 1,208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P12-201ENST00000436852 AEBP2Q6ZN18 517 aaPredicted RBP26.79■■□□□ 1.88
RPL3P12-201ENST00000436852 CHIC1Q5VXU3 224 aa25.34■■□□□ 1.65
RPL3P12-201ENST00000436852 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
RPL3P12-201ENST00000436852 SENP3Q9H4L4 574 aaPredicted RBP22.72■■□□□ 1.23
RPL3P12-201ENST00000436852 PHF23Q9BUL5 403 aaPredicted RBP22.52■■□□□ 1.2
RPL3P12-201ENST00000436852 CCDC180Q9P1Z9 1646 aa22.09■■□□□ 1.13
RPL3P12-201ENST00000436852 ABCC9O60706 1549 aa21.79■■□□□ 1.08
RPL3P12-201ENST00000436852 FOXD1Q16676 465 aa21.29■■□□□ 1
RPL3P12-201ENST00000436852 RB1CC1Q8TDY2 1594 aa20.89■□□□□ 0.93
RPL3P12-201ENST00000436852 NACADO15069 1562 aa20.79■□□□□ 0.92
RPL3P12-201ENST00000436852 MYO15BQ96JP2 1530 aa20.57■□□□□ 0.88
RPL3P12-201ENST00000436852 DCAF8L2P0C7V8 631 aa20.56■□□□□ 0.88
RPL3P12-201ENST00000436852 UNC13AQ9UPW8 1703 aa20.48■□□□□ 0.87
RPL3P12-201ENST00000436852 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
RPL3P12-201ENST00000436852 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
RPL3P12-201ENST00000436852 PABPN1Q86U42 306 aaKnown RBP eCLIP20.25■□□□□ 0.83
RPL3P12-201ENST00000436852 BICRAQ9NZM4 1560 aa20.25■□□□□ 0.83
RPL3P12-201ENST00000436852 PLPPR3Q6T4P5 718 aa20.21■□□□□ 0.83
RPL3P12-201ENST00000436852 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.82
RPL3P12-201ENST00000436852 SCRIBQ14160 1630 aa20.07■□□□□ 0.8
RPL3P12-201ENST00000436852 SHROOM4Q9ULL8 1493 aa20.05■□□□□ 0.8
RPL3P12-201ENST00000436852 PPP6R1Q9UPN7 881 aa19.95■□□□□ 0.78
RPL3P12-201ENST00000436852 ADRA2BP18089 450 aa19.88■□□□□ 0.77
RPL3P12-201ENST00000436852 PIAS4Q8N2W9 510 aaPredicted RBP19.86■□□□□ 0.77
RPL3P12-201ENST00000436852 MSH5O43196 834 aa19.81■□□□□ 0.76
RPL3P12-201ENST00000436852 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
RPL3P12-201ENST00000436852 CC2D2AQ9P2K1 1620 aa19.74■□□□□ 0.75
RPL3P12-201ENST00000436852 CECR2Q9BXF3 1484 aa19.62■□□□□ 0.73
RPL3P12-201ENST00000436852 POTEDQ86YR6 584 aa19.46■□□□□ 0.71
RPL3P12-201ENST00000436852 SMARCA4P51532 1647 aa19.18■□□□□ 0.66
RPL3P12-201ENST00000436852 NCAPD3P42695 1498 aa19.14■□□□□ 0.65
RPL3P12-201ENST00000436852 BAZ1AQ9NRL2 1556 aaPredicted RBP19.11■□□□□ 0.65
RPL3P12-201ENST00000436852 SMARCA2P51531 1590 aa19.1■□□□□ 0.65
RPL3P12-201ENST00000436852 ATAD2BQ9ULI0 1458 aa19.1■□□□□ 0.65
RPL3P12-201ENST00000436852 HMGXB3Q12766 1538 aa19.06■□□□□ 0.64
RPL3P12-201ENST00000436852 PEG3Q9GZU2 1588 aa19.01■□□□□ 0.63
RPL3P12-201ENST00000436852 BAZ1BQ9UIG0 1483 aaKnown RBP18.95■□□□□ 0.62
RPL3P12-201ENST00000436852 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
RPL3P12-201ENST00000436852 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
RPL3P12-201ENST00000436852 NESP48681 1621 aa18.77■□□□□ 0.6
RPL3P12-201ENST00000436852 CUX2O14529 1486 aa18.75■□□□□ 0.59
RPL3P12-201ENST00000436852 WIZO95785 1651 aa18.75■□□□□ 0.59
RPL3P12-201ENST00000436852 LAMC3Q9Y6N6 1575 aa18.73■□□□□ 0.59
RPL3P12-201ENST00000436852 THOC2Q8NI27 1593 aaKnown RBP18.62■□□□□ 0.57
RPL3P12-201ENST00000436852 KIF21AQ7Z4S6 1674 aa18.62■□□□□ 0.57
RPL3P12-201ENST00000436852 RSF1Q96T23 1441 aaPredicted RBP18.59■□□□□ 0.57
RPL3P12-201ENST00000436852 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
RPL3P12-201ENST00000436852 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
RPL3P12-201ENST00000436852 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
RPL3P12-201ENST00000436852 DNAJC5Q9H3Z4 198 aa18.45■□□□□ 0.54
RPL3P12-201ENST00000436852 MRC2Q9UBG0 1479 aa18.42■□□□□ 0.54
RPL3P12-201ENST00000436852 CFTRP13569 1480 aa18.4■□□□□ 0.54
RPL3P12-201ENST00000436852 WDR62O43379 1518 aa18.39■□□□□ 0.54
RPL3P12-201ENST00000436852 CEP164Q9UPV0 1460 aa18.38■□□□□ 0.53
RPL3P12-201ENST00000436852 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
RPL3P12-201ENST00000436852 FANCD2Q9BXW9 1451 aa18.36■□□□□ 0.53
RPL3P12-201ENST00000436852 MAPK8IP2Q13387 824 aaPredicted RBP18.3■□□□□ 0.52
RPL3P12-201ENST00000436852 CCDC88BA6NC98 1476 aa18.27■□□□□ 0.52
RPL3P12-201ENST00000436852 URB2Q14146 1524 aaKnown RBP18.19■□□□□ 0.5
RPL3P12-201ENST00000436852 SCAF1Q9H7N4 1312 aaKnown RBP18.04■□□□□ 0.48
RPL3P12-201ENST00000436852 TOPBP1Q92547 1522 aa18.04■□□□□ 0.48
RPL3P12-201ENST00000436852 DMRT2Q9Y5R5 561 aa18.04■□□□□ 0.48
RPL3P12-201ENST00000436852 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
RPL3P12-201ENST00000436852 DNMBPQ6XZF7 1577 aa18.02■□□□□ 0.48
RPL3P12-201ENST00000436852 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
RPL3P12-201ENST00000436852 ZNF608Q9ULD9 1512 aaPredicted RBP17.93■□□□□ 0.46
RPL3P12-201ENST00000436852 EIF4G3O43432 1585 aaKnown RBP17.91■□□□□ 0.46
RPL3P12-201ENST00000436852 TARBP1Q13395 1621 aaKnown RBP17.9■□□□□ 0.46
RPL3P12-201ENST00000436852 POLA1P09884 1462 aaPredicted RBP17.86■□□□□ 0.45
RPL3P12-201ENST00000436852 OSCARQ8IYS5 282 aa17.85■□□□□ 0.45
RPL3P12-201ENST00000436852 SUPT5HO00267 1087 aaKnown RBP17.83■□□□□ 0.44
RPL3P12-201ENST00000436852 CUX1P39880 1505 aa17.79■□□□□ 0.44
RPL3P12-201ENST00000436852 FGD5Q6ZNL6 1462 aa17.78■□□□□ 0.44
RPL3P12-201ENST00000436852 PPP4R3CPQ6ZMV5 832 aa17.78■□□□□ 0.44
RPL3P12-201ENST00000436852 WDR97A6NE52 1622 aa17.78■□□□□ 0.44
RPL3P12-201ENST00000436852 AQRO60306 1485 aaKnown RBP eCLIP17.76■□□□□ 0.43
RPL3P12-201ENST00000436852 RAD54L2Q9Y4B4 1467 aa17.76■□□□□ 0.43
RPL3P12-201ENST00000436852 CHD1O14646 1710 aa17.76■□□□□ 0.43
RPL3P12-201ENST00000436852 SOGA1O94964 1423 aa17.75■□□□□ 0.43
RPL3P12-201ENST00000436852 TRIM41Q8WV44 630 aa17.69■□□□□ 0.42
RPL3P12-201ENST00000436852 RIMBP3CA6NJZ7 1639 aa17.68■□□□□ 0.42
RPL3P12-201ENST00000436852 RIMBP3BA6NNM3 1639 aa17.68■□□□□ 0.42
RPL3P12-201ENST00000436852 RIMBP3Q9UFD9 1639 aa17.68■□□□□ 0.42
RPL3P12-201ENST00000436852 TDRD9Q8NDG6 1382 aaKnown RBP17.67■□□□□ 0.42
RPL3P12-201ENST00000436852 PBRM1Q86U86 1689 aa17.64■□□□□ 0.41
RPL3P12-201ENST00000436852 SNAPC4Q5SXM2 1469 aa17.63■□□□□ 0.41
RPL3P12-201ENST00000436852 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
RPL3P12-201ENST00000436852 MAGI1Q96QZ7 1491 aaPredicted RBP17.62■□□□□ 0.41
RPL3P12-201ENST00000436852 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
RPL3P12-201ENST00000436852 GRIN2BQ13224 1484 aa17.61■□□□□ 0.41
RPL3P12-201ENST00000436852 ABCA10Q8WWZ4 1543 aa17.6■□□□□ 0.41
RPL3P12-201ENST00000436852 ABCA5Q8WWZ7 1642 aa17.6■□□□□ 0.41
RPL3P12-201ENST00000436852 TOP2BQ02880 1626 aa17.59■□□□□ 0.41
RPL3P12-201ENST00000436852 FBLN2P98095 1184 aa17.58■□□□□ 0.4
RPL3P12-201ENST00000436852 GAPVD1Q14C86 1478 aa17.56■□□□□ 0.4
RPL3P12-201ENST00000436852 SYNJ1O43426 1573 aa17.56■□□□□ 0.4
RPL3P12-201ENST00000436852 SYNJ2O15056 1496 aa17.55■□□□□ 0.4
RPL3P12-201ENST00000436852 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
RPL3P12-201ENST00000436852 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
RPL3P12-201ENST00000436852 CHMP7Q8WUX9 453 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms