RNA–Protein interactions for RNA: ENST00000436374.5

CCDC144A-209, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-209ENST00000436374 NISCHQ9Y2I1 1504 aa41.42■■■■■ 4.22
CCDC144A-209ENST00000436374 CCDC180Q9P1Z9 1646 aa37.06■■■■□ 3.52
CCDC144A-209ENST00000436374 ABCC9O60706 1549 aa36.87■■■■□ 3.49
CCDC144A-209ENST00000436374 RB1CC1Q8TDY2 1594 aa35.14■■■■□ 3.22
CCDC144A-209ENST00000436374 NACADO15069 1562 aa34.96■■■■□ 3.19
CCDC144A-209ENST00000436374 DCAF8L2P0C7V8 631 aa34.82■■■■□ 3.16
CCDC144A-209ENST00000436374 MYO15BQ96JP2 1530 aa34.54■■■■□ 3.12
CCDC144A-209ENST00000436374 UNC13AQ9UPW8 1703 aa34.5■■■■□ 3.11
CCDC144A-209ENST00000436374 ZCCHC6Q5VYS8 1495 aaKnown RBP34.49■■■■□ 3.11
CCDC144A-209ENST00000436374 DNAJC5BQ9UF47 199 aa34.46■■■■□ 3.11
CCDC144A-209ENST00000436374 PABPN1Q86U42 306 aaKnown RBP eCLIP34.37■■■■□ 3.09
CCDC144A-209ENST00000436374 DCAF1Q9Y4B6 1507 aa34.25■■■■□ 3.07
CCDC144A-209ENST00000436374 BICRAQ9NZM4 1560 aa34.22■■■■□ 3.07
CCDC144A-209ENST00000436374 SCRIBQ14160 1630 aa33.82■■■■□ 3
CCDC144A-209ENST00000436374 SHROOM4Q9ULL8 1493 aa33.63■■■□□ 2.97
CCDC144A-209ENST00000436374 CC2D2AQ9P2K1 1620 aa33.33■■■□□ 2.93
CCDC144A-209ENST00000436374 EIF4G1Q04637 1599 aaKnown RBP33.3■■■□□ 2.92
CCDC144A-209ENST00000436374 CECR2Q9BXF3 1484 aa33.16■■■□□ 2.9
CCDC144A-209ENST00000436374 NCAPD3P42695 1498 aa32.29■■■□□ 2.76
CCDC144A-209ENST00000436374 SMARCA4P51532 1647 aa32.28■■■□□ 2.76
CCDC144A-209ENST00000436374 ATAD2BQ9ULI0 1458 aa32.24■■■□□ 2.75
CCDC144A-209ENST00000436374 SMARCA2P51531 1590 aa32.11■■■□□ 2.73
CCDC144A-209ENST00000436374 BAZ1AQ9NRL2 1556 aaPredicted RBP32.1■■■□□ 2.73
CCDC144A-209ENST00000436374 HMGXB3Q12766 1538 aa32.05■■■□□ 2.72
CCDC144A-209ENST00000436374 MROH2BQ7Z745 1585 aa31.96■■■□□ 2.71
CCDC144A-209ENST00000436374 PEG3Q9GZU2 1588 aa31.94■■■□□ 2.7
CCDC144A-209ENST00000436374 BAZ1BQ9UIG0 1483 aaKnown RBP31.9■■■□□ 2.7
CCDC144A-209ENST00000436374 NESP48681 1621 aa31.78■■■□□ 2.68
CCDC144A-209ENST00000436374 ERCC6Q03468 1493 aa31.74■■■□□ 2.67
CCDC144A-209ENST00000436374 RSF1Q96T23 1441 aaPredicted RBP31.66■■■□□ 2.66
CCDC144A-209ENST00000436374 CUX2O14529 1486 aa31.63■■■□□ 2.65
CCDC144A-209ENST00000436374 WIZO95785 1651 aa31.6■■■□□ 2.65
CCDC144A-209ENST00000436374 LAMC3Q9Y6N6 1575 aa31.51■■■□□ 2.64
CCDC144A-209ENST00000436374 SUPT5HO00267 1087 aaKnown RBP31.42■■■□□ 2.62
CCDC144A-209ENST00000436374 THOC2Q8NI27 1593 aaKnown RBP31.4■■■□□ 2.62
CCDC144A-209ENST00000436374 DNAJC5Q9H3Z4 198 aa31.39■■■□□ 2.62
CCDC144A-209ENST00000436374 KIF21AQ7Z4S6 1674 aa31.38■■■□□ 2.61
CCDC144A-209ENST00000436374 CADPSQ9ULU8 1353 aa31.3■■■□□ 2.6
CCDC144A-209ENST00000436374 PDS5BQ9NTI5 1447 aa31.28■■■□□ 2.6
CCDC144A-209ENST00000436374 TOP2AP11388 1531 aaKnown RBP31.19■■■□□ 2.58
CCDC144A-209ENST00000436374 MRC2Q9UBG0 1479 aa31.04■■■□□ 2.56
CCDC144A-209ENST00000436374 CFTRP13569 1480 aa31.01■■■□□ 2.56
CCDC144A-209ENST00000436374 WDR62O43379 1518 aa30.98■■■□□ 2.55
CCDC144A-209ENST00000436374 FANCD2Q9BXW9 1451 aa30.96■■■□□ 2.55
CCDC144A-209ENST00000436374 CEP164Q9UPV0 1460 aa30.95■■■□□ 2.55
CCDC144A-209ENST00000436374 CCDC88BA6NC98 1476 aa30.82■■■□□ 2.53
CCDC144A-209ENST00000436374 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
CCDC144A-209ENST00000436374 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
CCDC144A-209ENST00000436374 TOPBP1Q92547 1522 aa30.42■■■□□ 2.46
CCDC144A-209ENST00000436374 ZNF608Q9ULD9 1512 aaPredicted RBP30.33■■■□□ 2.45
CCDC144A-209ENST00000436374 IFT140Q96RY7 1462 aa30.32■■■□□ 2.44
CCDC144A-209ENST00000436374 DNMBPQ6XZF7 1577 aa30.31■■■□□ 2.44
CCDC144A-209ENST00000436374 ABCC8Q09428 1581 aa30.29■■■□□ 2.44
CCDC144A-209ENST00000436374 OSCARQ8IYS5 282 aa30.21■■■□□ 2.43
CCDC144A-209ENST00000436374 TARBP1Q13395 1621 aaKnown RBP30.17■■■□□ 2.42
CCDC144A-209ENST00000436374 EIF4G3O43432 1585 aaKnown RBP30.15■■■□□ 2.42
CCDC144A-209ENST00000436374 POLA1P09884 1462 aaPredicted RBP30.12■■■□□ 2.41
CCDC144A-209ENST00000436374 TRIM41Q8WV44 630 aa30.1■■■□□ 2.41
CCDC144A-209ENST00000436374 AQRO60306 1485 aaKnown RBP eCLIP30.06■■■□□ 2.4
CCDC144A-209ENST00000436374 RAD54L2Q9Y4B4 1467 aa30.04■■■□□ 2.4
CCDC144A-209ENST00000436374 CUX1P39880 1505 aa30.01■■■□□ 2.39
CCDC144A-209ENST00000436374 SOGA1O94964 1423 aa29.96■■■□□ 2.39
CCDC144A-209ENST00000436374 FGD5Q6ZNL6 1462 aa29.96■■■□□ 2.39
CCDC144A-209ENST00000436374 CHD1O14646 1710 aa29.92■■■□□ 2.38
CCDC144A-209ENST00000436374 TDRD9Q8NDG6 1382 aaKnown RBP29.9■■■□□ 2.38
CCDC144A-209ENST00000436374 WRNQ14191 1432 aaPredicted RBP eCLIP29.89■■■□□ 2.38
CCDC144A-209ENST00000436374 RIMBP3CA6NJZ7 1639 aa29.88■■■□□ 2.37
CCDC144A-209ENST00000436374 RIMBP3BA6NNM3 1639 aa29.88■■■□□ 2.37
CCDC144A-209ENST00000436374 RIMBP3Q9UFD9 1639 aa29.88■■■□□ 2.37
CCDC144A-209ENST00000436374 CHIC1Q5VXU3 224 aa29.79■■■□□ 2.36
CCDC144A-209ENST00000436374 WDR97A6NE52 1622 aa29.78■■■□□ 2.36
CCDC144A-209ENST00000436374 ARHGEF11O15085 1522 aa29.78■■■□□ 2.36
CCDC144A-209ENST00000436374 FBLN2P98095 1184 aa29.75■■■□□ 2.35
CCDC144A-209ENST00000436374 SNAPC4Q5SXM2 1469 aa29.74■■■□□ 2.35
CCDC144A-209ENST00000436374 TOP2BQ02880 1626 aa29.71■■■□□ 2.35
CCDC144A-209ENST00000436374 GRIN2BQ13224 1484 aa29.67■■■□□ 2.34
CCDC144A-209ENST00000436374 BIVM-ERCC5R4GMW8 1640 aa29.67■■■□□ 2.34
CCDC144A-209ENST00000436374 SYNJ1O43426 1573 aa29.64■■■□□ 2.33
CCDC144A-209ENST00000436374 PBRM1Q86U86 1689 aa29.63■■■□□ 2.33
CCDC144A-209ENST00000436374 MAGI1Q96QZ7 1491 aaPredicted RBP29.63■■■□□ 2.33
CCDC144A-209ENST00000436374 ABCA10Q8WWZ4 1543 aa29.62■■■□□ 2.33
CCDC144A-209ENST00000436374 GAPVD1Q14C86 1478 aa29.61■■■□□ 2.33
CCDC144A-209ENST00000436374 ABCA5Q8WWZ7 1642 aa29.59■■■□□ 2.33
CCDC144A-209ENST00000436374 CHMP7Q8WUX9 453 aaPredicted RBP29.56■■■□□ 2.32
CCDC144A-209ENST00000436374 CLASP1Q7Z460 1538 aa29.55■■■□□ 2.32
CCDC144A-209ENST00000436374 SYNJ2O15056 1496 aa29.55■■■□□ 2.32
CCDC144A-209ENST00000436374 CYB5RLQ6IPT4 315 aa29.53■■■□□ 2.32
CCDC144A-209ENST00000436374 ARAP1Q96P48 1450 aa29.52■■■□□ 2.32
CCDC144A-209ENST00000436374 ADAMTS12P58397 1594 aa29.34■■■□□ 2.29
CCDC144A-209ENST00000436374 EEA1Q15075 1411 aa29.32■■■□□ 2.28
CCDC144A-209ENST00000436374 GRIN2AQ12879 1464 aa29.3■■■□□ 2.28
CCDC144A-209ENST00000436374 KIF27Q86VH2 1401 aa29.28■■■□□ 2.28
CCDC144A-209ENST00000436374 ERICH3Q5RHP9 1530 aa29.24■■■□□ 2.27
CCDC144A-209ENST00000436374 CEP170Q5SW79 1584 aa29.23■■■□□ 2.27
CCDC144A-209ENST00000436374 FHAD1B1AJZ9 1412 aa29.22■■■□□ 2.27
CCDC144A-209ENST00000436374 NUP160Q12769 1436 aa29.21■■■□□ 2.27
CCDC144A-209ENST00000436374 ERCC6L2Q5T890 1561 aa29.17■■■□□ 2.26
CCDC144A-209ENST00000436374 TRHP20396 242 aaPredicted RBP29.08■■■□□ 2.25
CCDC144A-209ENST00000436374 SHROOM2Q13796 1616 aa29.08■■■□□ 2.25
CCDC144A-209ENST00000436374 CSRNP3Q8WYN3 585 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms