RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 NISCHQ9Y2I1 1504 aa51.02■■■■■ 5.76
GTF3A-203ENST00000435781 CCDC180Q9P1Z9 1646 aa45.43■■■■■ 4.86
GTF3A-203ENST00000435781 ABCC9O60706 1549 aa44.34■■■■■ 4.69
GTF3A-203ENST00000435781 RB1CC1Q8TDY2 1594 aa42.69■■■■■ 4.43
GTF3A-203ENST00000435781 NACADO15069 1562 aa42.64■■■■■ 4.42
GTF3A-203ENST00000435781 DCAF8L2P0C7V8 631 aa42.52■■■■■ 4.4
GTF3A-203ENST00000435781 ZCCHC6Q5VYS8 1495 aaKnown RBP42.51■■■■■ 4.4
GTF3A-203ENST00000435781 MYO15BQ96JP2 1530 aa42.38■■■■■ 4.37
GTF3A-203ENST00000435781 DCAF1Q9Y4B6 1507 aa42.22■■■■■ 4.35
GTF3A-203ENST00000435781 UNC13AQ9UPW8 1703 aa41.86■■■■■ 4.29
GTF3A-203ENST00000435781 BICRAQ9NZM4 1560 aa41.43■■■■■ 4.22
GTF3A-203ENST00000435781 SCRIBQ14160 1630 aa41.42■■■■■ 4.22
GTF3A-203ENST00000435781 PABPN1Q86U42 306 aaKnown RBP eCLIP41.39■■■■■ 4.22
GTF3A-203ENST00000435781 SHROOM4Q9ULL8 1493 aa40.95■■■■■ 4.15
GTF3A-203ENST00000435781 DNAJC5BQ9UF47 199 aa40.63■■■■■ 4.09
GTF3A-203ENST00000435781 EIF4G1Q04637 1599 aaKnown RBP40.31■■■■■ 4.04
GTF3A-203ENST00000435781 CC2D2AQ9P2K1 1620 aa40.16■■■■■ 4.02
GTF3A-203ENST00000435781 CECR2Q9BXF3 1484 aa39.82■■■■□ 3.97
GTF3A-203ENST00000435781 SMARCA4P51532 1647 aa39.63■■■■□ 3.93
GTF3A-203ENST00000435781 BAZ1AQ9NRL2 1556 aaPredicted RBP39.55■■■■□ 3.92
GTF3A-203ENST00000435781 ATAD2BQ9ULI0 1458 aa39.35■■■■□ 3.89
GTF3A-203ENST00000435781 MROH2BQ7Z745 1585 aa39.33■■■■□ 3.89
GTF3A-203ENST00000435781 SMARCA2P51531 1590 aa39.32■■■■□ 3.88
GTF3A-203ENST00000435781 NCAPD3P42695 1498 aa39.3■■■■□ 3.88
GTF3A-203ENST00000435781 PEG3Q9GZU2 1588 aa39.22■■■■□ 3.87
GTF3A-203ENST00000435781 HMGXB3Q12766 1538 aa39.17■■■■□ 3.86
GTF3A-203ENST00000435781 BAZ1BQ9UIG0 1483 aaKnown RBP39.03■■■■□ 3.84
GTF3A-203ENST00000435781 WIZO95785 1651 aa38.95■■■■□ 3.83
GTF3A-203ENST00000435781 RSF1Q96T23 1441 aaPredicted RBP38.85■■■■□ 3.81
GTF3A-203ENST00000435781 TOP2AP11388 1531 aaKnown RBP38.5■■■■□ 3.75
GTF3A-203ENST00000435781 NESP48681 1621 aa38.39■■■■□ 3.74
GTF3A-203ENST00000435781 LAMC3Q9Y6N6 1575 aa38.31■■■■□ 3.72
GTF3A-203ENST00000435781 ERCC6Q03468 1493 aa38.2■■■■□ 3.71
GTF3A-203ENST00000435781 CADPSQ9ULU8 1353 aa38.15■■■■□ 3.7
GTF3A-203ENST00000435781 KIF21AQ7Z4S6 1674 aa38.02■■■■□ 3.68
GTF3A-203ENST00000435781 CCDC88BA6NC98 1476 aa38.02■■■■□ 3.68
GTF3A-203ENST00000435781 PDS5BQ9NTI5 1447 aa38■■■■□ 3.67
GTF3A-203ENST00000435781 CFTRP13569 1480 aa37.95■■■■□ 3.67
GTF3A-203ENST00000435781 THOC2Q8NI27 1593 aaKnown RBP37.85■■■■□ 3.65
GTF3A-203ENST00000435781 SUPT5HO00267 1087 aaKnown RBP37.84■■■■□ 3.65
GTF3A-203ENST00000435781 PRDM2Q13029 1718 aa37.84■■■■□ 3.65
GTF3A-203ENST00000435781 CUX2O14529 1486 aa37.8■■■■□ 3.64
GTF3A-203ENST00000435781 FANCD2Q9BXW9 1451 aa37.74■■■■□ 3.63
GTF3A-203ENST00000435781 CEP164Q9UPV0 1460 aa37.7■■■■□ 3.63
GTF3A-203ENST00000435781 MRC2Q9UBG0 1479 aa37.64■■■■□ 3.62
GTF3A-203ENST00000435781 WDR62O43379 1518 aa37.54■■■■□ 3.6
GTF3A-203ENST00000435781 URB2Q14146 1524 aaKnown RBP37.39■■■■□ 3.58
GTF3A-203ENST00000435781 TOPBP1Q92547 1522 aa37.16■■■■□ 3.54
GTF3A-203ENST00000435781 DNMBPQ6XZF7 1577 aa37.14■■■■□ 3.54
GTF3A-203ENST00000435781 ABCC8Q09428 1581 aa37.12■■■■□ 3.53
GTF3A-203ENST00000435781 CUX1P39880 1505 aa36.9■■■■□ 3.5
GTF3A-203ENST00000435781 IFT140Q96RY7 1462 aa36.89■■■■□ 3.5
GTF3A-203ENST00000435781 POLA1P09884 1462 aaPredicted RBP36.84■■■■□ 3.49
GTF3A-203ENST00000435781 TARBP1Q13395 1621 aaKnown RBP36.8■■■■□ 3.48
GTF3A-203ENST00000435781 FGD5Q6ZNL6 1462 aa36.75■■■■□ 3.47
GTF3A-203ENST00000435781 ZNF608Q9ULD9 1512 aaPredicted RBP36.75■■■■□ 3.47
GTF3A-203ENST00000435781 RAD54L2Q9Y4B4 1467 aa36.67■■■■□ 3.46
GTF3A-203ENST00000435781 SOGA1O94964 1423 aa36.65■■■■□ 3.46
GTF3A-203ENST00000435781 EIF4G3O43432 1585 aaKnown RBP36.65■■■■□ 3.46
GTF3A-203ENST00000435781 BIVM-ERCC5R4GMW8 1640 aa36.63■■■■□ 3.45
GTF3A-203ENST00000435781 WRNQ14191 1432 aaPredicted RBP eCLIP36.63■■■■□ 3.45
GTF3A-203ENST00000435781 TOP2BQ02880 1626 aa36.61■■■■□ 3.45
GTF3A-203ENST00000435781 SYNJ1O43426 1573 aa36.61■■■■□ 3.45
GTF3A-203ENST00000435781 DNAJC5Q9H3Z4 198 aa36.56■■■■□ 3.44
GTF3A-203ENST00000435781 WDR97A6NE52 1622 aa36.54■■■■□ 3.44
GTF3A-203ENST00000435781 AQRO60306 1485 aaKnown RBP eCLIP36.52■■■■□ 3.446e-7■■■■□ 20.5
GTF3A-203ENST00000435781 TDRD9Q8NDG6 1382 aaKnown RBP36.43■■■■□ 3.42
GTF3A-203ENST00000435781 ABCA10Q8WWZ4 1543 aa36.4■■■■□ 3.42
GTF3A-203ENST00000435781 ABCA5Q8WWZ7 1642 aa36.3■■■■□ 3.4
GTF3A-203ENST00000435781 PBRM1Q86U86 1689 aa36.29■■■■□ 3.4
GTF3A-203ENST00000435781 GAPVD1Q14C86 1478 aa36.25■■■■□ 3.39
GTF3A-203ENST00000435781 GRIN2BQ13224 1484 aa36.24■■■■□ 3.39
GTF3A-203ENST00000435781 CHD1O14646 1710 aa36.24■■■■□ 3.39
GTF3A-203ENST00000435781 SNAPC4Q5SXM2 1469 aa36.2■■■■□ 3.39
GTF3A-203ENST00000435781 OSCARQ8IYS5 282 aa36.17■■■■□ 3.38
GTF3A-203ENST00000435781 MAGI1Q96QZ7 1491 aaPredicted RBP36.16■■■■□ 3.38
GTF3A-203ENST00000435781 FBLN2P98095 1184 aa36.03■■■■□ 3.36
GTF3A-203ENST00000435781 SYNJ2O15056 1496 aa36■■■■□ 3.35
GTF3A-203ENST00000435781 ERICH3Q5RHP9 1530 aa35.98■■■■□ 3.35
GTF3A-203ENST00000435781 ADAMTS12P58397 1594 aa35.95■■■■□ 3.35
GTF3A-203ENST00000435781 CHMP7Q8WUX9 453 aaPredicted RBP35.93■■■■□ 3.34
GTF3A-203ENST00000435781 KIF27Q86VH2 1401 aa35.85■■■■□ 3.33
GTF3A-203ENST00000435781 FHAD1B1AJZ9 1412 aa35.83■■■■□ 3.33
GTF3A-203ENST00000435781 GRIN2AQ12879 1464 aa35.8■■■■□ 3.32
GTF3A-203ENST00000435781 CLASP1Q7Z460 1538 aa35.78■■■■□ 3.32
GTF3A-203ENST00000435781 TRIM41Q8WV44 630 aa35.73■■■■□ 3.31
GTF3A-203ENST00000435781 RIMBP3CA6NJZ7 1639 aa35.71■■■■□ 3.31
GTF3A-203ENST00000435781 RIMBP3BA6NNM3 1639 aa35.71■■■■□ 3.31
GTF3A-203ENST00000435781 RIMBP3Q9UFD9 1639 aa35.71■■■■□ 3.31
GTF3A-203ENST00000435781 IGF1RP08069 1367 aa35.7■■■■□ 3.31
GTF3A-203ENST00000435781 CUL7Q14999 1698 aa35.7■■■■□ 3.31
GTF3A-203ENST00000435781 ARHGEF11O15085 1522 aa35.67■■■■□ 3.3
GTF3A-203ENST00000435781 CEP170Q5SW79 1584 aa35.64■■■■□ 3.3
GTF3A-203ENST00000435781 NUP160Q12769 1436 aa35.62■■■■□ 3.29
GTF3A-203ENST00000435781 RUSC2Q8N2Y8 1516 aa35.57■■■■□ 3.29
GTF3A-203ENST00000435781 CARMIL1Q5VZK9 1371 aa35.49■■■■□ 3.27
GTF3A-203ENST00000435781 SHROOM2Q13796 1616 aa35.42■■■■□ 3.26
GTF3A-203ENST00000435781 ARAP1Q96P48 1450 aa35.39■■■■□ 3.26
GTF3A-203ENST00000435781 CHIC1Q5VXU3 224 aa35.34■■■■□ 3.25
GTF3A-203ENST00000435781 RAPGEF2Q9Y4G8 1499 aa35.3■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms