RNA–Protein interactions for RNA: ENST00000435738.1

AP001476.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP001476.2, Length 355 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001476.2-201ENST00000435738 NISCHQ9Y2I1 1504 aa27.38■■□□□ 1.97
AP001476.2-201ENST00000435738 ABCC9O60706 1549 aa25.63■■□□□ 1.69
AP001476.2-201ENST00000435738 CCDC180Q9P1Z9 1646 aa24.92■■□□□ 1.58
AP001476.2-201ENST00000435738 DNAJC5BQ9UF47 199 aa24.62■■□□□ 1.53
AP001476.2-201ENST00000435738 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
AP001476.2-201ENST00000435738 PABPN1Q86U42 306 aaKnown RBP eCLIP23.75■■□□□ 1.39
AP001476.2-201ENST00000435738 NACADO15069 1562 aa23.71■■□□□ 1.39
AP001476.2-201ENST00000435738 UNC13AQ9UPW8 1703 aa23.55■■□□□ 1.36
AP001476.2-201ENST00000435738 DCAF8L2P0C7V8 631 aa23.53■■□□□ 1.36
AP001476.2-201ENST00000435738 BICRAQ9NZM4 1560 aa23.35■■□□□ 1.33
AP001476.2-201ENST00000435738 DNAJC5Q9H3Z4 198 aa23.18■■□□□ 1.3
AP001476.2-201ENST00000435738 CECR2Q9BXF3 1484 aa23.16■■□□□ 1.3
AP001476.2-201ENST00000435738 CC2D2AQ9P2K1 1620 aa23.11■■□□□ 1.29
AP001476.2-201ENST00000435738 MYO15BQ96JP2 1530 aa23.1■■□□□ 1.29
AP001476.2-201ENST00000435738 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
AP001476.2-201ENST00000435738 EIF4G1Q04637 1599 aaKnown RBP22.87■■□□□ 1.25
AP001476.2-201ENST00000435738 SCRIBQ14160 1630 aa22.68■■□□□ 1.22
AP001476.2-201ENST00000435738 DCAF1Q9Y4B6 1507 aa22.55■■□□□ 1.2
AP001476.2-201ENST00000435738 ZCCHC6Q5VYS8 1495 aaKnown RBP22.52■■□□□ 1.2
AP001476.2-201ENST00000435738 CUX2O14529 1486 aa22.37■■□□□ 1.17
AP001476.2-201ENST00000435738 ERCC6Q03468 1493 aa22.22■■□□□ 1.15
AP001476.2-201ENST00000435738 TRIM41Q8WV44 630 aa21.93■■□□□ 1.1
AP001476.2-201ENST00000435738 NCAPD3P42695 1498 aa21.87■■□□□ 1.09
AP001476.2-201ENST00000435738 NESP48681 1621 aa21.79■■□□□ 1.08
AP001476.2-201ENST00000435738 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
AP001476.2-201ENST00000435738 THOC2Q8NI27 1593 aaKnown RBP21.71■■□□□ 1.07
AP001476.2-201ENST00000435738 HMGXB3Q12766 1538 aa21.66■■□□□ 1.06
AP001476.2-201ENST00000435738 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
AP001476.2-201ENST00000435738 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
AP001476.2-201ENST00000435738 SMARCA4P51532 1647 aa21.53■■□□□ 1.04
AP001476.2-201ENST00000435738 KIF21AQ7Z4S6 1674 aa21.53■■□□□ 1.04
AP001476.2-201ENST00000435738 BAZ1BQ9UIG0 1483 aaKnown RBP21.51■■□□□ 1.03
AP001476.2-201ENST00000435738 PDS5BQ9NTI5 1447 aa21.45■■□□□ 1.02
AP001476.2-201ENST00000435738 BAZ1AQ9NRL2 1556 aaPredicted RBP21.33■■□□□ 1.01
AP001476.2-201ENST00000435738 MRC2Q9UBG0 1479 aa21.3■■□□□ 1
AP001476.2-201ENST00000435738 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
AP001476.2-201ENST00000435738 OSCARQ8IYS5 282 aa21.26■□□□□ 0.99
AP001476.2-201ENST00000435738 WDR62O43379 1518 aa21.25■□□□□ 0.99
AP001476.2-201ENST00000435738 CADPSQ9ULU8 1353 aa21.19■□□□□ 0.98
AP001476.2-201ENST00000435738 MROH2BQ7Z745 1585 aa21.09■□□□□ 0.97
AP001476.2-201ENST00000435738 CEP164Q9UPV0 1460 aa21.07■□□□□ 0.96
AP001476.2-201ENST00000435738 RIMBP3CA6NJZ7 1639 aa21.06■□□□□ 0.96
AP001476.2-201ENST00000435738 RIMBP3BA6NNM3 1639 aa21.06■□□□□ 0.96
AP001476.2-201ENST00000435738 RIMBP3Q9UFD9 1639 aa21.06■□□□□ 0.96
AP001476.2-201ENST00000435738 FANCD2Q9BXW9 1451 aa20.97■□□□□ 0.95
AP001476.2-201ENST00000435738 ARHGEF11O15085 1522 aa20.89■□□□□ 0.94
AP001476.2-201ENST00000435738 TRHP20396 242 aaPredicted RBP20.88■□□□□ 0.93
AP001476.2-201ENST00000435738 WIZO95785 1651 aa20.83■□□□□ 0.93
AP001476.2-201ENST00000435738 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.93
AP001476.2-201ENST00000435738 URB2Q14146 1524 aaKnown RBP20.83■□□□□ 0.92
AP001476.2-201ENST00000435738 CYB5RLQ6IPT4 315 aa20.82■□□□□ 0.92
AP001476.2-201ENST00000435738 CFTRP13569 1480 aa20.78■□□□□ 0.92
AP001476.2-201ENST00000435738 ZNF608Q9ULD9 1512 aaPredicted RBP20.69■□□□□ 0.9
AP001476.2-201ENST00000435738 IFT140Q96RY7 1462 aa20.68■□□□□ 0.9
AP001476.2-201ENST00000435738 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
AP001476.2-201ENST00000435738 PRDM2Q13029 1718 aa20.59■□□□□ 0.89
AP001476.2-201ENST00000435738 CHD1O14646 1710 aa20.58■□□□□ 0.89
AP001476.2-201ENST00000435738 EIF4G3O43432 1585 aaKnown RBP20.57■□□□□ 0.88
AP001476.2-201ENST00000435738 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
AP001476.2-201ENST00000435738 FBLN2P98095 1184 aa20.51■□□□□ 0.87
AP001476.2-201ENST00000435738 TOP2AP11388 1531 aaKnown RBP20.5■□□□□ 0.87
AP001476.2-201ENST00000435738 TOPBP1Q92547 1522 aa20.48■□□□□ 0.87
AP001476.2-201ENST00000435738 AQRO60306 1485 aaKnown RBP eCLIP20.43■□□□□ 0.86
AP001476.2-201ENST00000435738 ABCC8Q09428 1581 aa20.42■□□□□ 0.86
AP001476.2-201ENST00000435738 DNMBPQ6XZF7 1577 aa20.36■□□□□ 0.85
AP001476.2-201ENST00000435738 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
AP001476.2-201ENST00000435738 CCDC88BA6NC98 1476 aa20.27■□□□□ 0.84
AP001476.2-201ENST00000435738 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.83
AP001476.2-201ENST00000435738 SYNJ1O43426 1573 aa20.25■□□□□ 0.83
AP001476.2-201ENST00000435738 CHMP7Q8WUX9 453 aaPredicted RBP20.22■□□□□ 0.83
AP001476.2-201ENST00000435738 POLA1P09884 1462 aaPredicted RBP20.22■□□□□ 0.83
AP001476.2-201ENST00000435738 SNAPC4Q5SXM2 1469 aa20.2■□□□□ 0.82
AP001476.2-201ENST00000435738 TDRD9Q8NDG6 1382 aaKnown RBP20.2■□□□□ 0.82
AP001476.2-201ENST00000435738 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
AP001476.2-201ENST00000435738 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.81
AP001476.2-201ENST00000435738 SOGA1O94964 1423 aa20.14■□□□□ 0.81
AP001476.2-201ENST00000435738 MAGI1Q96QZ7 1491 aaPredicted RBP20.11■□□□□ 0.81
AP001476.2-201ENST00000435738 WDR97A6NE52 1622 aa20.11■□□□□ 0.81
AP001476.2-201ENST00000435738 SYNJ2O15056 1496 aa20.06■□□□□ 0.8
AP001476.2-201ENST00000435738 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
AP001476.2-201ENST00000435738 FGD5Q6ZNL6 1462 aa20.01■□□□□ 0.79
AP001476.2-201ENST00000435738 PBRM1Q86U86 1689 aa19.95■□□□□ 0.78
AP001476.2-201ENST00000435738 ILDR1Q86SU0 546 aaPredicted RBP19.94■□□□□ 0.78
AP001476.2-201ENST00000435738 KIF13AQ9H1H9 1805 aa19.92■□□□□ 0.78
AP001476.2-201ENST00000435738 ERCC6L2Q5T890 1561 aa19.91■□□□□ 0.78
AP001476.2-201ENST00000435738 CUX1P39880 1505 aa19.86■□□□□ 0.77
AP001476.2-201ENST00000435738 CEP170Q5SW79 1584 aa19.83■□□□□ 0.76
AP001476.2-201ENST00000435738 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
AP001476.2-201ENST00000435738 ABCA5Q8WWZ7 1642 aa19.76■□□□□ 0.75
AP001476.2-201ENST00000435738 KDM4FA0A1W2PPD8 638 aa19.75■□□□□ 0.75
AP001476.2-201ENST00000435738 FAM69CQ0P6D2 419 aa19.74■□□□□ 0.75
AP001476.2-201ENST00000435738 SHROOM2Q13796 1616 aa19.73■□□□□ 0.75
AP001476.2-201ENST00000435738 ABCA10Q8WWZ4 1543 aa19.72■□□□□ 0.75
AP001476.2-201ENST00000435738 NUP160Q12769 1436 aa19.71■□□□□ 0.75
AP001476.2-201ENST00000435738 ADAMTS12P58397 1594 aa19.69■□□□□ 0.74
AP001476.2-201ENST00000435738 KDM6BO15054 1643 aa19.69■□□□□ 0.74
AP001476.2-201ENST00000435738 ABCC10Q5T3U5 1492 aa19.68■□□□□ 0.74
AP001476.2-201ENST00000435738 NPM1P06748 294 aaKnown RBP eCLIP19.67■□□□□ 0.74
AP001476.2-201ENST00000435738 PRG4Q92954 1404 aaPredicted RBP19.63■□□□□ 0.73
AP001476.2-201ENST00000435738 DIP2BQ9P265 1576 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms