RNA–Protein interactions for RNA: ENST00000435603.5

CHL1-205, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 5

Gene CHL1, Length 723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-205ENST00000435603 NISCHQ9Y2I1 1504 aa26.12■■□□□ 1.77
CHL1-205ENST00000435603 CCDC180Q9P1Z9 1646 aa23.22■■□□□ 1.31
CHL1-205ENST00000435603 ABCC9O60706 1549 aa22.96■■□□□ 1.27
CHL1-205ENST00000435603 AEBP2Q6ZN18 517 aaPredicted RBP22.89■■□□□ 1.25
CHL1-205ENST00000435603 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
CHL1-205ENST00000435603 RB1CC1Q8TDY2 1594 aa21.91■■□□□ 1.1
CHL1-205ENST00000435603 NACADO15069 1562 aa21.82■■□□□ 1.08
CHL1-205ENST00000435603 ZCCHC6Q5VYS8 1495 aaKnown RBP21.71■■□□□ 1.07
CHL1-205ENST00000435603 UNC13AQ9UPW8 1703 aa21.65■■□□□ 1.06
CHL1-205ENST00000435603 CHIC1Q5VXU3 224 aa21.61■■□□□ 1.05
CHL1-205ENST00000435603 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
CHL1-205ENST00000435603 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
CHL1-205ENST00000435603 PABPN1Q86U42 306 aaKnown RBP eCLIP21.47■■□□□ 1.03
CHL1-205ENST00000435603 BICRAQ9NZM4 1560 aa21.4■■□□□ 1.02
CHL1-205ENST00000435603 SCRIBQ14160 1630 aa21.3■■□□□ 1
CHL1-205ENST00000435603 DNAJC5BQ9UF47 199 aa21.3■■□□□ 1
CHL1-205ENST00000435603 SHROOM4Q9ULL8 1493 aa20.86■□□□□ 0.93
CHL1-205ENST00000435603 EIF4G1Q04637 1599 aaKnown RBP20.76■□□□□ 0.91
CHL1-205ENST00000435603 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
CHL1-205ENST00000435603 CECR2Q9BXF3 1484 aa20.57■□□□□ 0.88
CHL1-205ENST00000435603 SMARCA4P51532 1647 aa20.31■□□□□ 0.84
CHL1-205ENST00000435603 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
CHL1-205ENST00000435603 ATAD2BQ9ULI0 1458 aa20.2■□□□□ 0.82
CHL1-205ENST00000435603 BAZ1AQ9NRL2 1556 aaPredicted RBP20.19■□□□□ 0.82
CHL1-205ENST00000435603 NCAPD3P42695 1498 aa20.17■□□□□ 0.82
CHL1-205ENST00000435603 SMARCA2P51531 1590 aa20.1■□□□□ 0.81
CHL1-205ENST00000435603 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
CHL1-205ENST00000435603 HMGXB3Q12766 1538 aa20.04■□□□□ 0.8
CHL1-205ENST00000435603 WIZO95785 1651 aa20.03■□□□□ 0.8
CHL1-205ENST00000435603 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
CHL1-205ENST00000435603 NESP48681 1621 aa19.89■□□□□ 0.77
CHL1-205ENST00000435603 RSF1Q96T23 1441 aaPredicted RBP19.88■□□□□ 0.77
CHL1-205ENST00000435603 ERCC6Q03468 1493 aa19.68■□□□□ 0.74
CHL1-205ENST00000435603 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
CHL1-205ENST00000435603 KIF21AQ7Z4S6 1674 aa19.65■□□□□ 0.74
CHL1-205ENST00000435603 LAMC3Q9Y6N6 1575 aa19.65■□□□□ 0.74
CHL1-205ENST00000435603 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
CHL1-205ENST00000435603 THOC2Q8NI27 1593 aaKnown RBP19.53■□□□□ 0.72
CHL1-205ENST00000435603 CCDC88BA6NC98 1476 aa19.5■□□□□ 0.71
CHL1-205ENST00000435603 PDS5BQ9NTI5 1447 aa19.47■□□□□ 0.71
CHL1-205ENST00000435603 CUX2O14529 1486 aa19.47■□□□□ 0.71
CHL1-205ENST00000435603 CFTRP13569 1480 aa19.45■□□□□ 0.7
CHL1-205ENST00000435603 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
CHL1-205ENST00000435603 PRDM2Q13029 1718 aa19.37■□□□□ 0.69
CHL1-205ENST00000435603 SUPT5HO00267 1087 aaKnown RBP19.35■□□□□ 0.69
CHL1-205ENST00000435603 MRC2Q9UBG0 1479 aa19.34■□□□□ 0.69
CHL1-205ENST00000435603 CEP164Q9UPV0 1460 aa19.34■□□□□ 0.69
CHL1-205ENST00000435603 SENP3Q9H4L4 574 aaPredicted RBP19.33■□□□□ 0.68
CHL1-205ENST00000435603 WDR62O43379 1518 aa19.3■□□□□ 0.68
CHL1-205ENST00000435603 URB2Q14146 1524 aaKnown RBP19.26■□□□□ 0.67
CHL1-205ENST00000435603 PHF23Q9BUL5 403 aaPredicted RBP19.19■□□□□ 0.66
CHL1-205ENST00000435603 DNAJC5Q9H3Z4 198 aa19.11■□□□□ 0.65
CHL1-205ENST00000435603 TOPBP1Q92547 1522 aa19.09■□□□□ 0.65
CHL1-205ENST00000435603 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.63
CHL1-205ENST00000435603 ZNF608Q9ULD9 1512 aaPredicted RBP18.99■□□□□ 0.63
CHL1-205ENST00000435603 CUX1P39880 1505 aa18.94■□□□□ 0.62
CHL1-205ENST00000435603 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
CHL1-205ENST00000435603 TARBP1Q13395 1621 aaKnown RBP18.92■□□□□ 0.62
CHL1-205ENST00000435603 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
CHL1-205ENST00000435603 IFT140Q96RY7 1462 aa18.91■□□□□ 0.62
CHL1-205ENST00000435603 RAD54L2Q9Y4B4 1467 aa18.9■□□□□ 0.62
CHL1-205ENST00000435603 EIF4G3O43432 1585 aaKnown RBP18.86■□□□□ 0.61
CHL1-205ENST00000435603 FGD5Q6ZNL6 1462 aa18.86■□□□□ 0.61
CHL1-205ENST00000435603 AQRO60306 1485 aaKnown RBP eCLIP18.85■□□□□ 0.61
CHL1-205ENST00000435603 SOGA1O94964 1423 aa18.81■□□□□ 0.6
CHL1-205ENST00000435603 TDRD9Q8NDG6 1382 aaKnown RBP18.79■□□□□ 0.6
CHL1-205ENST00000435603 SYNJ1O43426 1573 aa18.76■□□□□ 0.59
CHL1-205ENST00000435603 WDR97A6NE52 1622 aa18.75■□□□□ 0.59
CHL1-205ENST00000435603 CHD1O14646 1710 aa18.72■□□□□ 0.59
CHL1-205ENST00000435603 BIVM-ERCC5R4GMW8 1640 aa18.71■□□□□ 0.59
CHL1-205ENST00000435603 POTEDQ86YR6 584 aa18.71■□□□□ 0.59
CHL1-205ENST00000435603 TOP2BQ02880 1626 aa18.7■□□□□ 0.58
CHL1-205ENST00000435603 WRNQ14191 1432 aaPredicted RBP eCLIP18.69■□□□□ 0.58
CHL1-205ENST00000435603 OSCARQ8IYS5 282 aa18.69■□□□□ 0.58
CHL1-205ENST00000435603 PBRM1Q86U86 1689 aa18.64■□□□□ 0.57
CHL1-205ENST00000435603 SNAPC4Q5SXM2 1469 aa18.62■□□□□ 0.57
CHL1-205ENST00000435603 ABCA5Q8WWZ7 1642 aa18.61■□□□□ 0.57
CHL1-205ENST00000435603 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
CHL1-205ENST00000435603 FBLN2P98095 1184 aa18.61■□□□□ 0.57
CHL1-205ENST00000435603 GAPVD1Q14C86 1478 aa18.58■□□□□ 0.56
CHL1-205ENST00000435603 GRIN2BQ13224 1484 aa18.56■□□□□ 0.56
CHL1-205ENST00000435603 RIMBP3CA6NJZ7 1639 aa18.52■□□□□ 0.55
CHL1-205ENST00000435603 RIMBP3BA6NNM3 1639 aa18.52■□□□□ 0.55
CHL1-205ENST00000435603 RIMBP3Q9UFD9 1639 aa18.52■□□□□ 0.55
CHL1-205ENST00000435603 MAGI1Q96QZ7 1491 aaPredicted RBP18.5■□□□□ 0.55
CHL1-205ENST00000435603 TRIM41Q8WV44 630 aa18.49■□□□□ 0.55
CHL1-205ENST00000435603 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
CHL1-205ENST00000435603 SYNJ2O15056 1496 aa18.46■□□□□ 0.55
CHL1-205ENST00000435603 ARHGEF11O15085 1522 aa18.44■□□□□ 0.54
CHL1-205ENST00000435603 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
CHL1-205ENST00000435603 CLASP1Q7Z460 1538 aa18.42■□□□□ 0.54
CHL1-205ENST00000435603 ERICH3Q5RHP9 1530 aa18.37■□□□□ 0.53
CHL1-205ENST00000435603 GRIN2AQ12879 1464 aa18.36■□□□□ 0.53
CHL1-205ENST00000435603 CEP170Q5SW79 1584 aa18.35■□□□□ 0.53
CHL1-205ENST00000435603 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
CHL1-205ENST00000435603 CYB5RLQ6IPT4 315 aa18.31■□□□□ 0.52
CHL1-205ENST00000435603 ARAP1Q96P48 1450 aa18.31■□□□□ 0.52
CHL1-205ENST00000435603 RUSC2Q8N2Y8 1516 aa18.3■□□□□ 0.52
CHL1-205ENST00000435603 IGF1RP08069 1367 aa18.3■□□□□ 0.52
CHL1-205ENST00000435603 ERCC6L2Q5T890 1561 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms