RNA–Protein interactions for RNA: ENST00000434685.5

NEB-210, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-210ENST00000434685 NISCHQ9Y2I1 1504 aa11.94□□□□□ -0.5
NEB-210ENST00000434685 CCDC180Q9P1Z9 1646 aa10.77□□□□□ -0.68
NEB-210ENST00000434685 CHIC1Q5VXU3 224 aa10.66□□□□□ -0.7
NEB-210ENST00000434685 AEBP2Q6ZN18 517 aaPredicted RBP10.6□□□□□ -0.71
NEB-210ENST00000434685 ABCC9O60706 1549 aa10.48□□□□□ -0.73
NEB-210ENST00000434685 RB1CC1Q8TDY2 1594 aa10.12□□□□□ -0.79
NEB-210ENST00000434685 NACADO15069 1562 aa10.1□□□□□ -0.79
NEB-210ENST00000434685 MYO15BQ96JP2 1530 aa10.06□□□□□ -0.8
NEB-210ENST00000434685 ZCCHC6Q5VYS8 1495 aaKnown RBP9.95□□□□□ -0.82
NEB-210ENST00000434685 DCAF1Q9Y4B6 1507 aa9.95□□□□□ -0.82
NEB-210ENST00000434685 UNC13AQ9UPW8 1703 aa9.94□□□□□ -0.82
NEB-210ENST00000434685 BICRAQ9NZM4 1560 aa9.84□□□□□ -0.83
NEB-210ENST00000434685 SHROOM4Q9ULL8 1493 aa9.81□□□□□ -0.84
NEB-210ENST00000434685 DCAF8L2P0C7V8 631 aa9.79□□□□□ -0.84
NEB-210ENST00000434685 DNAJC5BQ9UF47 199 aa9.7□□□□□ -0.86
NEB-210ENST00000434685 SCRIBQ14160 1630 aa9.69□□□□□ -0.86
NEB-210ENST00000434685 PABPN1Q86U42 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
NEB-210ENST00000434685 EIF4G1Q04637 1599 aaKnown RBP9.57□□□□□ -0.88
NEB-210ENST00000434685 CC2D2AQ9P2K1 1620 aa9.55□□□□□ -0.88
NEB-210ENST00000434685 CECR2Q9BXF3 1484 aa9.46□□□□□ -0.89
NEB-210ENST00000434685 PHF23Q9BUL5 403 aaPredicted RBP9.43□□□□□ -0.9
NEB-210ENST00000434685 SMARCA4P51532 1647 aa9.32□□□□□ -0.92
NEB-210ENST00000434685 NCAPD3P42695 1498 aa9.29□□□□□ -0.92
NEB-210ENST00000434685 HMGXB3Q12766 1538 aa9.28□□□□□ -0.92
NEB-210ENST00000434685 PEG3Q9GZU2 1588 aa9.28□□□□□ -0.92
NEB-210ENST00000434685 SMARCA2P51531 1590 aa9.27□□□□□ -0.92
NEB-210ENST00000434685 BAZ1AQ9NRL2 1556 aaPredicted RBP9.27□□□□□ -0.92
NEB-210ENST00000434685 ATAD2BQ9ULI0 1458 aa9.26□□□□□ -0.93
NEB-210ENST00000434685 MROH2BQ7Z745 1585 aa9.17□□□□□ -0.94
NEB-210ENST00000434685 BAZ1BQ9UIG0 1483 aaKnown RBP9.16□□□□□ -0.94
NEB-210ENST00000434685 SUPT5HO00267 1087 aaKnown RBP9.15□□□□□ -0.95
NEB-210ENST00000434685 RSF1Q96T23 1441 aaPredicted RBP9.12□□□□□ -0.95
NEB-210ENST00000434685 CUX2O14529 1486 aa9.09□□□□□ -0.95
NEB-210ENST00000434685 LAMC3Q9Y6N6 1575 aa9.09□□□□□ -0.95
NEB-210ENST00000434685 WIZO95785 1651 aa9.07□□□□□ -0.96
NEB-210ENST00000434685 THOC2Q8NI27 1593 aaKnown RBP9.05□□□□□ -0.96
NEB-210ENST00000434685 NESP48681 1621 aa9.04□□□□□ -0.96
NEB-210ENST00000434685 ERCC6Q03468 1493 aa9.04□□□□□ -0.96
NEB-210ENST00000434685 TOP2AP11388 1531 aaKnown RBP9.01□□□□□ -0.97
NEB-210ENST00000434685 KIF21AQ7Z4S6 1674 aa9.01□□□□□ -0.97
NEB-210ENST00000434685 CADPSQ9ULU8 1353 aa8.97□□□□□ -0.97
NEB-210ENST00000434685 PDS5BQ9NTI5 1447 aa8.97□□□□□ -0.97
NEB-210ENST00000434685 PRDM2Q13029 1718 aa8.95□□□□□ -0.98
NEB-210ENST00000434685 WDR62O43379 1518 aa8.94□□□□□ -0.98
NEB-210ENST00000434685 CFTRP13569 1480 aa8.93□□□□□ -0.98
NEB-210ENST00000434685 MRC2Q9UBG0 1479 aa8.92□□□□□ -0.98
NEB-210ENST00000434685 SENP3Q9H4L4 574 aaPredicted RBP8.92□□□□□ -0.98
NEB-210ENST00000434685 DNAJC5Q9H3Z4 198 aa8.91□□□□□ -0.98
NEB-210ENST00000434685 CEP164Q9UPV0 1460 aa8.89□□□□□ -0.99
NEB-210ENST00000434685 FANCD2Q9BXW9 1451 aa8.87□□□□□ -0.99
NEB-210ENST00000434685 CCDC88BA6NC98 1476 aa8.85□□□□□ -0.99
NEB-210ENST00000434685 URB2Q14146 1524 aaKnown RBP8.81□□□□□ -1
NEB-210ENST00000434685 PLPPR3Q6T4P5 718 aa8.81□□□□□ -1
NEB-210ENST00000434685 DNMBPQ6XZF7 1577 aa8.75□□□□□ -1.01
NEB-210ENST00000434685 ABCC8Q09428 1581 aa8.75□□□□□ -1.01
NEB-210ENST00000434685 TOPBP1Q92547 1522 aa8.74□□□□□ -1.01
NEB-210ENST00000434685 IFT140Q96RY7 1462 aa8.72□□□□□ -1.01
NEB-210ENST00000434685 TARBP1Q13395 1621 aaKnown RBP8.7□□□□□ -1.02
NEB-210ENST00000434685 WDR97A6NE52 1622 aa8.69□□□□□ -1.02
NEB-210ENST00000434685 EIF4G3O43432 1585 aaKnown RBP8.68□□□□□ -1.02
NEB-210ENST00000434685 ZNF608Q9ULD9 1512 aaPredicted RBP8.65□□□□□ -1.02
NEB-210ENST00000434685 POLA1P09884 1462 aaPredicted RBP8.65□□□□□ -1.02
NEB-210ENST00000434685 CUX1P39880 1505 aa8.62□□□□□ -1.03
NEB-210ENST00000434685 FGD5Q6ZNL6 1462 aa8.6□□□□□ -1.03
NEB-210ENST00000434685 CHD1O14646 1710 aa8.59□□□□□ -1.03
NEB-210ENST00000434685 SYNJ1O43426 1573 aa8.58□□□□□ -1.04
NEB-210ENST00000434685 BIVM-ERCC5R4GMW8 1640 aa8.58□□□□□ -1.04
NEB-210ENST00000434685 WRNQ14191 1432 aaPredicted RBP eCLIP8.57□□□□□ -1.04
NEB-210ENST00000434685 TRIM41Q8WV44 630 aa8.57□□□□□ -1.04
NEB-210ENST00000434685 ABCA5Q8WWZ7 1642 aa8.56□□□□□ -1.04
NEB-210ENST00000434685 RAD54L2Q9Y4B4 1467 aa8.56□□□□□ -1.04
NEB-210ENST00000434685 SOGA1O94964 1423 aa8.56□□□□□ -1.04
NEB-210ENST00000434685 OSCARQ8IYS5 282 aa8.55□□□□□ -1.04
NEB-210ENST00000434685 PBRM1Q86U86 1689 aa8.55□□□□□ -1.04
NEB-210ENST00000434685 TOP2BQ02880 1626 aa8.55□□□□□ -1.04
NEB-210ENST00000434685 AQRO60306 1485 aaKnown RBP eCLIP8.55□□□□□ -1.04
NEB-210ENST00000434685 ABCA10Q8WWZ4 1543 aa8.55□□□□□ -1.04
NEB-210ENST00000434685 RIMBP3CA6NJZ7 1639 aa8.55□□□□□ -1.04
NEB-210ENST00000434685 RIMBP3BA6NNM3 1639 aa8.55□□□□□ -1.04
NEB-210ENST00000434685 RIMBP3Q9UFD9 1639 aa8.55□□□□□ -1.04
NEB-210ENST00000434685 MAGI1Q96QZ7 1491 aaPredicted RBP8.54□□□□□ -1.04
NEB-210ENST00000434685 CLASP1Q7Z460 1538 aa8.52□□□□□ -1.05
NEB-210ENST00000434685 GRIN2BQ13224 1484 aa8.52□□□□□ -1.05
NEB-210ENST00000434685 SNAPC4Q5SXM2 1469 aa8.52□□□□□ -1.05
NEB-210ENST00000434685 ARHGEF11O15085 1522 aa8.51□□□□□ -1.05
NEB-210ENST00000434685 SYNJ2O15056 1496 aa8.49□□□□□ -1.05
NEB-210ENST00000434685 TDRD9Q8NDG6 1382 aaKnown RBP8.49□□□□□ -1.05
NEB-210ENST00000434685 GAPVD1Q14C86 1478 aa8.49□□□□□ -1.05
NEB-210ENST00000434685 ADAMTS12P58397 1594 aa8.48□□□□□ -1.05
NEB-210ENST00000434685 FAM9AQ8IZU1 332 aaPredicted RBP8.47□□□□□ -1.05
NEB-210ENST00000434685 RUSC2Q8N2Y8 1516 aa8.46□□□□□ -1.05
NEB-210ENST00000434685 ERICH3Q5RHP9 1530 aa8.45□□□□□ -1.06
NEB-210ENST00000434685 ARAP1Q96P48 1450 aa8.44□□□□□ -1.06
NEB-210ENST00000434685 GRIN2AQ12879 1464 aa8.42□□□□□ -1.06
NEB-210ENST00000434685 SHROOM2Q13796 1616 aa8.42□□□□□ -1.06
NEB-210ENST00000434685 NUP160Q12769 1436 aa8.41□□□□□ -1.06
NEB-210ENST00000434685 FHAD1B1AJZ9 1412 aa8.4□□□□□ -1.06
NEB-210ENST00000434685 CEP170Q5SW79 1584 aa8.4□□□□□ -1.06
NEB-210ENST00000434685 EHMT2Q96KQ7 1210 aa8.4□□□□□ -1.07
NEB-210ENST00000434685 LOC105371045A0A1W2PR82 267 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms