RNA–Protein interactions for RNA: ENST00000434214.1

TMEM38B-203, Transcript of transmembrane protein 38B, humanhuman

TSL 2

Gene TMEM38B, Length 502 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-203ENST00000434214 NISCHQ9Y2I1 1504 aa26.04■■□□□ 1.76
TMEM38B-203ENST00000434214 ABCC9O60706 1549 aa23.44■■□□□ 1.34
TMEM38B-203ENST00000434214 CCDC180Q9P1Z9 1646 aa23.43■■□□□ 1.34
TMEM38B-203ENST00000434214 RB1CC1Q8TDY2 1594 aa22.29■■□□□ 1.16
TMEM38B-203ENST00000434214 NACADO15069 1562 aa22.12■■□□□ 1.13
TMEM38B-203ENST00000434214 DNAJC5BQ9UF47 199 aa22.03■■□□□ 1.12
TMEM38B-203ENST00000434214 DCAF8L2P0C7V8 631 aa21.9■■□□□ 1.1
TMEM38B-203ENST00000434214 UNC13AQ9UPW8 1703 aa21.88■■□□□ 1.09
TMEM38B-203ENST00000434214 MYO15BQ96JP2 1530 aa21.8■■□□□ 1.08
TMEM38B-203ENST00000434214 PABPN1Q86U42 306 aaKnown RBP eCLIP21.77■■□□□ 1.08
TMEM38B-203ENST00000434214 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
TMEM38B-203ENST00000434214 ZCCHC6Q5VYS8 1495 aaKnown RBP21.59■■□□□ 1.05
TMEM38B-203ENST00000434214 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
TMEM38B-203ENST00000434214 SHROOM4Q9ULL8 1493 aa21.34■■□□□ 1.01
TMEM38B-203ENST00000434214 SCRIBQ14160 1630 aa21.33■■□□□ 1.01
TMEM38B-203ENST00000434214 CC2D2AQ9P2K1 1620 aa21.2■□□□□ 0.98
TMEM38B-203ENST00000434214 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.97
TMEM38B-203ENST00000434214 CECR2Q9BXF3 1484 aa21.12■□□□□ 0.97
TMEM38B-203ENST00000434214 AEBP2Q6ZN18 517 aaPredicted RBP20.8■□□□□ 0.92
TMEM38B-203ENST00000434214 NCAPD3P42695 1498 aa20.41■□□□□ 0.86
TMEM38B-203ENST00000434214 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
TMEM38B-203ENST00000434214 SMARCA4P51532 1647 aa20.35■□□□□ 0.85
TMEM38B-203ENST00000434214 DNAJC5Q9H3Z4 198 aa20.3■□□□□ 0.84
TMEM38B-203ENST00000434214 SMARCA2P51531 1590 aa20.29■□□□□ 0.84
TMEM38B-203ENST00000434214 HMGXB3Q12766 1538 aa20.28■□□□□ 0.84
TMEM38B-203ENST00000434214 CUX2O14529 1486 aa20.22■□□□□ 0.83
TMEM38B-203ENST00000434214 ERCC6Q03468 1493 aa20.22■□□□□ 0.83
TMEM38B-203ENST00000434214 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
TMEM38B-203ENST00000434214 PEG3Q9GZU2 1588 aa20.15■□□□□ 0.82
TMEM38B-203ENST00000434214 NESP48681 1621 aa20.14■□□□□ 0.81
TMEM38B-203ENST00000434214 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.81
TMEM38B-203ENST00000434214 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.8
TMEM38B-203ENST00000434214 THOC2Q8NI27 1593 aaKnown RBP19.99■□□□□ 0.79
TMEM38B-203ENST00000434214 LAMC3Q9Y6N6 1575 aa19.98■□□□□ 0.79
TMEM38B-203ENST00000434214 KIF21AQ7Z4S6 1674 aa19.92■□□□□ 0.78
TMEM38B-203ENST00000434214 WIZO95785 1651 aa19.85■□□□□ 0.77
TMEM38B-203ENST00000434214 PDS5BQ9NTI5 1447 aa19.82■□□□□ 0.76
TMEM38B-203ENST00000434214 CADPSQ9ULU8 1353 aa19.77■□□□□ 0.76
TMEM38B-203ENST00000434214 MRC2Q9UBG0 1479 aa19.69■□□□□ 0.74
TMEM38B-203ENST00000434214 WDR62O43379 1518 aa19.67■□□□□ 0.74
TMEM38B-203ENST00000434214 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.73
TMEM38B-203ENST00000434214 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
TMEM38B-203ENST00000434214 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
TMEM38B-203ENST00000434214 TOP2AP11388 1531 aaKnown RBP19.58■□□□□ 0.73
TMEM38B-203ENST00000434214 CFTRP13569 1480 aa19.56■□□□□ 0.72
TMEM38B-203ENST00000434214 FANCD2Q9BXW9 1451 aa19.56■□□□□ 0.72
TMEM38B-203ENST00000434214 PRDM2Q13029 1718 aa19.44■□□□□ 0.7
TMEM38B-203ENST00000434214 URB2Q14146 1524 aaKnown RBP19.44■□□□□ 0.7
TMEM38B-203ENST00000434214 CCDC88BA6NC98 1476 aa19.33■□□□□ 0.68
TMEM38B-203ENST00000434214 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
TMEM38B-203ENST00000434214 OSCARQ8IYS5 282 aa19.22■□□□□ 0.67
TMEM38B-203ENST00000434214 IFT140Q96RY7 1462 aa19.21■□□□□ 0.67
TMEM38B-203ENST00000434214 TOPBP1Q92547 1522 aa19.2■□□□□ 0.66
TMEM38B-203ENST00000434214 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
TMEM38B-203ENST00000434214 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
TMEM38B-203ENST00000434214 EIF4G3O43432 1585 aaKnown RBP19.12■□□□□ 0.65
TMEM38B-203ENST00000434214 ABCC8Q09428 1581 aa19.12■□□□□ 0.65
TMEM38B-203ENST00000434214 RIMBP3CA6NJZ7 1639 aa19.08■□□□□ 0.65
TMEM38B-203ENST00000434214 RIMBP3BA6NNM3 1639 aa19.08■□□□□ 0.65
TMEM38B-203ENST00000434214 RIMBP3Q9UFD9 1639 aa19.08■□□□□ 0.65
TMEM38B-203ENST00000434214 TARBP1Q13395 1621 aaKnown RBP19.07■□□□□ 0.64
TMEM38B-203ENST00000434214 CHD1O14646 1710 aa19.01■□□□□ 0.63
TMEM38B-203ENST00000434214 POLA1P09884 1462 aaPredicted RBP19.01■□□□□ 0.63
TMEM38B-203ENST00000434214 ARHGEF11O15085 1522 aa19■□□□□ 0.63
TMEM38B-203ENST00000434214 AQRO60306 1485 aaKnown RBP eCLIP18.99■□□□□ 0.63
TMEM38B-203ENST00000434214 RAD54L2Q9Y4B4 1467 aa18.93■□□□□ 0.62
TMEM38B-203ENST00000434214 FGD5Q6ZNL6 1462 aa18.88■□□□□ 0.61
TMEM38B-203ENST00000434214 SOGA1O94964 1423 aa18.87■□□□□ 0.61
TMEM38B-203ENST00000434214 CUX1P39880 1505 aa18.86■□□□□ 0.61
TMEM38B-203ENST00000434214 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
TMEM38B-203ENST00000434214 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
TMEM38B-203ENST00000434214 FBLN2P98095 1184 aa18.82■□□□□ 0.6
TMEM38B-203ENST00000434214 SNAPC4Q5SXM2 1469 aa18.82■□□□□ 0.6
TMEM38B-203ENST00000434214 ARAP1Q96P48 1450 aa18.82■□□□□ 0.6
TMEM38B-203ENST00000434214 CYB5RLQ6IPT4 315 aa18.79■□□□□ 0.6
TMEM38B-203ENST00000434214 CLASP1Q7Z460 1538 aa18.77■□□□□ 0.6
TMEM38B-203ENST00000434214 MAGI1Q96QZ7 1491 aaPredicted RBP18.76■□□□□ 0.59
TMEM38B-203ENST00000434214 GRIN2BQ13224 1484 aa18.74■□□□□ 0.59
TMEM38B-203ENST00000434214 PBRM1Q86U86 1689 aa18.73■□□□□ 0.59
TMEM38B-203ENST00000434214 SUPT5HO00267 1087 aaKnown RBP18.72■□□□□ 0.59
TMEM38B-203ENST00000434214 SYNJ1O43426 1573 aa18.72■□□□□ 0.59
TMEM38B-203ENST00000434214 SYNJ2O15056 1496 aa18.69■□□□□ 0.58
TMEM38B-203ENST00000434214 CHMP7Q8WUX9 453 aaPredicted RBP18.68■□□□□ 0.58
TMEM38B-203ENST00000434214 ABCA5Q8WWZ7 1642 aa18.67■□□□□ 0.58
TMEM38B-203ENST00000434214 GAPVD1Q14C86 1478 aa18.66■□□□□ 0.58
TMEM38B-203ENST00000434214 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
TMEM38B-203ENST00000434214 TRHP20396 242 aaPredicted RBP18.58■□□□□ 0.56
TMEM38B-203ENST00000434214 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
TMEM38B-203ENST00000434214 TOP2BQ02880 1626 aa18.55■□□□□ 0.56
TMEM38B-203ENST00000434214 ADAMTS12P58397 1594 aa18.54■□□□□ 0.56
TMEM38B-203ENST00000434214 WRNQ14191 1432 aaPredicted RBP eCLIP18.52■□□□□ 0.56
TMEM38B-203ENST00000434214 GRIN2AQ12879 1464 aa18.52■□□□□ 0.55
TMEM38B-203ENST00000434214 CEP170Q5SW79 1584 aa18.48■□□□□ 0.55
TMEM38B-203ENST00000434214 ERCC6L2Q5T890 1561 aa18.48■□□□□ 0.55
TMEM38B-203ENST00000434214 NUP160Q12769 1436 aa18.46■□□□□ 0.55
TMEM38B-203ENST00000434214 SHROOM2Q13796 1616 aa18.42■□□□□ 0.54
TMEM38B-203ENST00000434214 FHAD1B1AJZ9 1412 aa18.42■□□□□ 0.54
TMEM38B-203ENST00000434214 ERICH3Q5RHP9 1530 aa18.42■□□□□ 0.54
TMEM38B-203ENST00000434214 RUSC2Q8N2Y8 1516 aa18.28■□□□□ 0.52
TMEM38B-203ENST00000434214 PRG4Q92954 1404 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms