RNA–Protein interactions for RNA: ENST00000433028.6

CHEK2-213, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-213ENST00000433028 NISCHQ9Y2I1 1504 aa33.37■■■□□ 2.93
CHEK2-213ENST00000433028 CCDC180Q9P1Z9 1646 aa29.96■■■□□ 2.39
CHEK2-213ENST00000433028 ABCC9O60706 1549 aa29.72■■■□□ 2.35
CHEK2-213ENST00000433028 RB1CC1Q8TDY2 1594 aa28.41■■■□□ 2.14
CHEK2-213ENST00000433028 NACADO15069 1562 aa28.26■■■□□ 2.11
CHEK2-213ENST00000433028 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
CHEK2-213ENST00000433028 MYO15BQ96JP2 1530 aa27.94■■■□□ 2.06
CHEK2-213ENST00000433028 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
CHEK2-213ENST00000433028 DNAJC5BQ9UF47 199 aa27.75■■■□□ 2.03
CHEK2-213ENST00000433028 ZCCHC6Q5VYS8 1495 aaKnown RBP27.69■■■□□ 2.02
CHEK2-213ENST00000433028 PABPN1Q86U42 306 aaKnown RBP eCLIP27.65■■■□□ 2.02
CHEK2-213ENST00000433028 DCAF1Q9Y4B6 1507 aa27.63■■■□□ 2.01
CHEK2-213ENST00000433028 BICRAQ9NZM4 1560 aa27.59■■■□□ 2.01
CHEK2-213ENST00000433028 SHROOM4Q9ULL8 1493 aa27.27■■□□□ 1.96
CHEK2-213ENST00000433028 SCRIBQ14160 1630 aa27.22■■□□□ 1.95
CHEK2-213ENST00000433028 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
CHEK2-213ENST00000433028 EIF4G1Q04637 1599 aaKnown RBP26.88■■□□□ 1.89
CHEK2-213ENST00000433028 CECR2Q9BXF3 1484 aa26.78■■□□□ 1.88
CHEK2-213ENST00000433028 AEBP2Q6ZN18 517 aaPredicted RBP26.14■■□□□ 1.77
CHEK2-213ENST00000433028 NCAPD3P42695 1498 aa26.07■■□□□ 1.76
CHEK2-213ENST00000433028 SMARCA4P51532 1647 aa26.02■■□□□ 1.76
CHEK2-213ENST00000433028 ATAD2BQ9ULI0 1458 aa25.99■■□□□ 1.75
CHEK2-213ENST00000433028 SMARCA2P51531 1590 aa25.95■■□□□ 1.74
CHEK2-213ENST00000433028 BAZ1AQ9NRL2 1556 aaPredicted RBP25.91■■□□□ 1.74
CHEK2-213ENST00000433028 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
CHEK2-213ENST00000433028 PEG3Q9GZU2 1588 aa25.81■■□□□ 1.72
CHEK2-213ENST00000433028 BAZ1BQ9UIG0 1483 aaKnown RBP25.74■■□□□ 1.71
CHEK2-213ENST00000433028 MROH2BQ7Z745 1585 aa25.7■■□□□ 1.7
CHEK2-213ENST00000433028 ERCC6Q03468 1493 aa25.65■■□□□ 1.7
CHEK2-213ENST00000433028 CUX2O14529 1486 aa25.62■■□□□ 1.69
CHEK2-213ENST00000433028 NESP48681 1621 aa25.58■■□□□ 1.69
CHEK2-213ENST00000433028 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
CHEK2-213ENST00000433028 DNAJC5Q9H3Z4 198 aa25.42■■□□□ 1.66
CHEK2-213ENST00000433028 WIZO95785 1651 aa25.42■■□□□ 1.66
CHEK2-213ENST00000433028 THOC2Q8NI27 1593 aaKnown RBP25.36■■□□□ 1.65
CHEK2-213ENST00000433028 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
CHEK2-213ENST00000433028 PDS5BQ9NTI5 1447 aa25.29■■□□□ 1.64
CHEK2-213ENST00000433028 CADPSQ9ULU8 1353 aa25.25■■□□□ 1.63
CHEK2-213ENST00000433028 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.62
CHEK2-213ENST00000433028 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
CHEK2-213ENST00000433028 MRC2Q9UBG0 1479 aa25.06■■□□□ 1.6
CHEK2-213ENST00000433028 WDR62O43379 1518 aa25.03■■□□□ 1.6
CHEK2-213ENST00000433028 CFTRP13569 1480 aa25.01■■□□□ 1.59
CHEK2-213ENST00000433028 CEP164Q9UPV0 1460 aa24.99■■□□□ 1.59
CHEK2-213ENST00000433028 FANCD2Q9BXW9 1451 aa24.97■■□□□ 1.59
CHEK2-213ENST00000433028 PRDM2Q13029 1718 aa24.87■■□□□ 1.57
CHEK2-213ENST00000433028 CCDC88BA6NC98 1476 aa24.79■■□□□ 1.56
CHEK2-213ENST00000433028 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
CHEK2-213ENST00000433028 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
CHEK2-213ENST00000433028 TOPBP1Q92547 1522 aa24.52■■□□□ 1.52
CHEK2-213ENST00000433028 ABCC8Q09428 1581 aa24.5■■□□□ 1.51
CHEK2-213ENST00000433028 IFT140Q96RY7 1462 aa24.49■■□□□ 1.51
CHEK2-213ENST00000433028 DNMBPQ6XZF7 1577 aa24.46■■□□□ 1.51
CHEK2-213ENST00000433028 OSCARQ8IYS5 282 aa24.42■■□□□ 1.5
CHEK2-213ENST00000433028 ZNF608Q9ULD9 1512 aaPredicted RBP24.42■■□□□ 1.5
CHEK2-213ENST00000433028 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.48
CHEK2-213ENST00000433028 TARBP1Q13395 1621 aaKnown RBP24.33■■□□□ 1.48
CHEK2-213ENST00000433028 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
CHEK2-213ENST00000433028 POLA1P09884 1462 aaPredicted RBP24.27■■□□□ 1.48
CHEK2-213ENST00000433028 AQRO60306 1485 aaKnown RBP eCLIP24.2■■□□□ 1.461e-11■■■■■ 27.3
CHEK2-213ENST00000433028 CHD1O14646 1710 aa24.15■■□□□ 1.46
CHEK2-213ENST00000433028 RAD54L2Q9Y4B4 1467 aa24.15■■□□□ 1.46
CHEK2-213ENST00000433028 CUX1P39880 1505 aa24.14■■□□□ 1.46
CHEK2-213ENST00000433028 SOGA1O94964 1423 aa24.14■■□□□ 1.46
CHEK2-213ENST00000433028 RIMBP3CA6NJZ7 1639 aa24.14■■□□□ 1.45
CHEK2-213ENST00000433028 RIMBP3BA6NNM3 1639 aa24.14■■□□□ 1.45
CHEK2-213ENST00000433028 RIMBP3Q9UFD9 1639 aa24.14■■□□□ 1.45
CHEK2-213ENST00000433028 FGD5Q6ZNL6 1462 aa24.13■■□□□ 1.45
CHEK2-213ENST00000433028 WDR97A6NE52 1622 aa24.12■■□□□ 1.45
CHEK2-213ENST00000433028 SUPT5HO00267 1087 aaKnown RBP24.09■■□□□ 1.45
CHEK2-213ENST00000433028 ARHGEF11O15085 1522 aa24.06■■□□□ 1.44
CHEK2-213ENST00000433028 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
CHEK2-213ENST00000433028 SNAPC4Q5SXM2 1469 aa23.97■■□□□ 1.43
CHEK2-213ENST00000433028 FBLN2P98095 1184 aa23.96■■□□□ 1.43
CHEK2-213ENST00000433028 MAGI1Q96QZ7 1491 aaPredicted RBP23.95■■□□□ 1.42
CHEK2-213ENST00000433028 GRIN2BQ13224 1484 aa23.94■■□□□ 1.42
CHEK2-213ENST00000433028 PBRM1Q86U86 1689 aa23.91■■□□□ 1.42
CHEK2-213ENST00000433028 ABCA10Q8WWZ4 1543 aa23.89■■□□□ 1.41
CHEK2-213ENST00000433028 GAPVD1Q14C86 1478 aa23.87■■□□□ 1.41
CHEK2-213ENST00000433028 ABCA5Q8WWZ7 1642 aa23.87■■□□□ 1.41
CHEK2-213ENST00000433028 CLASP1Q7Z460 1538 aa23.86■■□□□ 1.41
CHEK2-213ENST00000433028 SYNJ2O15056 1496 aa23.86■■□□□ 1.41
CHEK2-213ENST00000433028 SYNJ1O43426 1573 aa23.84■■□□□ 1.41
CHEK2-213ENST00000433028 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
CHEK2-213ENST00000433028 CHMP7Q8WUX9 453 aaPredicted RBP23.84■■□□□ 1.41
CHEK2-213ENST00000433028 ARAP1Q96P48 1450 aa23.82■■□□□ 1.4
CHEK2-213ENST00000433028 TOP2BQ02880 1626 aa23.82■■□□□ 1.4
CHEK2-213ENST00000433028 CYB5RLQ6IPT4 315 aa23.82■■□□□ 1.4
CHEK2-213ENST00000433028 WRNQ14191 1432 aaPredicted RBP eCLIP23.79■■□□□ 1.4
CHEK2-213ENST00000433028 ADAMTS12P58397 1594 aa23.66■■□□□ 1.38
CHEK2-213ENST00000433028 GRIN2AQ12879 1464 aa23.64■■□□□ 1.37
CHEK2-213ENST00000433028 ERICH3Q5RHP9 1530 aa23.6■■□□□ 1.37
CHEK2-213ENST00000433028 FHAD1B1AJZ9 1412 aa23.57■■□□□ 1.36
CHEK2-213ENST00000433028 NUP160Q12769 1436 aa23.56■■□□□ 1.36
CHEK2-213ENST00000433028 CEP170Q5SW79 1584 aa23.56■■□□□ 1.36
CHEK2-213ENST00000433028 TRHP20396 242 aaPredicted RBP23.49■■□□□ 1.35
CHEK2-213ENST00000433028 SHROOM2Q13796 1616 aa23.49■■□□□ 1.35
CHEK2-213ENST00000433028 ERCC6L2Q5T890 1561 aa23.46■■□□□ 1.35
CHEK2-213ENST00000433028 RUSC2Q8N2Y8 1516 aa23.33■■□□□ 1.33
CHEK2-213ENST00000433028 KIF27Q86VH2 1401 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms