RNA–Protein interactions for RNA: ENST00000432711.1

LINC01827-201, Transcript of long intergenic non-protein coding RNA 1827, humanhuman

TSL 2 BASIC

Gene LINC01827, Length 555 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01827-201ENST00000432711 NISCHQ9Y2I1 1504 aa21.8■■□□□ 1.08
LINC01827-201ENST00000432711 ABCC9O60706 1549 aa20.22■□□□□ 0.83
LINC01827-201ENST00000432711 CCDC180Q9P1Z9 1646 aa19.77■□□□□ 0.76
LINC01827-201ENST00000432711 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
LINC01827-201ENST00000432711 AEBP2Q6ZN18 517 aaPredicted RBP19.16■□□□□ 0.66
LINC01827-201ENST00000432711 RB1CC1Q8TDY2 1594 aa19.02■□□□□ 0.63
LINC01827-201ENST00000432711 NACADO15069 1562 aa18.76■□□□□ 0.59
LINC01827-201ENST00000432711 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
LINC01827-201ENST00000432711 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
LINC01827-201ENST00000432711 DCAF8L2P0C7V8 631 aa18.64■□□□□ 0.57
LINC01827-201ENST00000432711 BICRAQ9NZM4 1560 aa18.5■□□□□ 0.55
LINC01827-201ENST00000432711 MYO15BQ96JP2 1530 aa18.29■□□□□ 0.52
LINC01827-201ENST00000432711 CHIC1Q5VXU3 224 aa18.24■□□□□ 0.51
LINC01827-201ENST00000432711 CC2D2AQ9P2K1 1620 aa18.23■□□□□ 0.51
LINC01827-201ENST00000432711 CECR2Q9BXF3 1484 aa18.23■□□□□ 0.51
LINC01827-201ENST00000432711 SHROOM4Q9ULL8 1493 aa18.11■□□□□ 0.49
LINC01827-201ENST00000432711 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.48
LINC01827-201ENST00000432711 SCRIBQ14160 1630 aa18.06■□□□□ 0.48
LINC01827-201ENST00000432711 ZCCHC6Q5VYS8 1495 aaKnown RBP17.99■□□□□ 0.47
LINC01827-201ENST00000432711 DNAJC5Q9H3Z4 198 aa17.98■□□□□ 0.47
LINC01827-201ENST00000432711 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
LINC01827-201ENST00000432711 CUX2O14529 1486 aa17.53■□□□□ 0.4
LINC01827-201ENST00000432711 ERCC6Q03468 1493 aa17.48■□□□□ 0.39
LINC01827-201ENST00000432711 NCAPD3P42695 1498 aa17.3■□□□□ 0.36
LINC01827-201ENST00000432711 NESP48681 1621 aa17.26■□□□□ 0.35
LINC01827-201ENST00000432711 ATAD2BQ9ULI0 1458 aa17.22■□□□□ 0.35
LINC01827-201ENST00000432711 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
LINC01827-201ENST00000432711 THOC2Q8NI27 1593 aaKnown RBP17.16■□□□□ 0.34
LINC01827-201ENST00000432711 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
LINC01827-201ENST00000432711 SMARCA4P51532 1647 aa17.14■□□□□ 0.33
LINC01827-201ENST00000432711 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
LINC01827-201ENST00000432711 KIF21AQ7Z4S6 1674 aa17.07■□□□□ 0.32
LINC01827-201ENST00000432711 BAZ1BQ9UIG0 1483 aaKnown RBP17.05■□□□□ 0.32
LINC01827-201ENST00000432711 LAMC3Q9Y6N6 1575 aa17.02■□□□□ 0.31
LINC01827-201ENST00000432711 BAZ1AQ9NRL2 1556 aaPredicted RBP16.96■□□□□ 0.31
LINC01827-201ENST00000432711 PEG3Q9GZU2 1588 aa16.92■□□□□ 0.3
LINC01827-201ENST00000432711 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
LINC01827-201ENST00000432711 MROH2BQ7Z745 1585 aa16.83■□□□□ 0.28
LINC01827-201ENST00000432711 MRC2Q9UBG0 1479 aa16.82■□□□□ 0.28
LINC01827-201ENST00000432711 WDR62O43379 1518 aa16.8■□□□□ 0.28
LINC01827-201ENST00000432711 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.27
LINC01827-201ENST00000432711 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
LINC01827-201ENST00000432711 WIZO95785 1651 aa16.65■□□□□ 0.26
LINC01827-201ENST00000432711 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
LINC01827-201ENST00000432711 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
LINC01827-201ENST00000432711 RIMBP3CA6NJZ7 1639 aa16.56■□□□□ 0.24
LINC01827-201ENST00000432711 RIMBP3BA6NNM3 1639 aa16.56■□□□□ 0.24
LINC01827-201ENST00000432711 RIMBP3Q9UFD9 1639 aa16.56■□□□□ 0.24
LINC01827-201ENST00000432711 URB2Q14146 1524 aaKnown RBP16.52■□□□□ 0.24
LINC01827-201ENST00000432711 CFTRP13569 1480 aa16.49■□□□□ 0.23
LINC01827-201ENST00000432711 ARHGEF11O15085 1522 aa16.45■□□□□ 0.22
LINC01827-201ENST00000432711 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
LINC01827-201ENST00000432711 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
LINC01827-201ENST00000432711 TOP2AP11388 1531 aaKnown RBP16.36■□□□□ 0.21
LINC01827-201ENST00000432711 CYB5RLQ6IPT4 315 aa16.34■□□□□ 0.21
LINC01827-201ENST00000432711 IFT140Q96RY7 1462 aa16.33■□□□□ 0.2
LINC01827-201ENST00000432711 EIF4G3O43432 1585 aaKnown RBP16.31■□□□□ 0.2
LINC01827-201ENST00000432711 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
LINC01827-201ENST00000432711 CHD1O14646 1710 aa16.31■□□□□ 0.2
LINC01827-201ENST00000432711 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
LINC01827-201ENST00000432711 SENP3Q9H4L4 574 aaPredicted RBP16.28■□□□□ 0.2
LINC01827-201ENST00000432711 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
LINC01827-201ENST00000432711 TOPBP1Q92547 1522 aa16.25■□□□□ 0.19
LINC01827-201ENST00000432711 AQRO60306 1485 aaKnown RBP eCLIP16.18■□□□□ 0.18
LINC01827-201ENST00000432711 FBLN2P98095 1184 aa16.18■□□□□ 0.18
LINC01827-201ENST00000432711 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
LINC01827-201ENST00000432711 CCDC88BA6NC98 1476 aa16.16■□□□□ 0.18
LINC01827-201ENST00000432711 TARBP1Q13395 1621 aaKnown RBP16.16■□□□□ 0.18
LINC01827-201ENST00000432711 ABCC8Q09428 1581 aa16.13■□□□□ 0.17
LINC01827-201ENST00000432711 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
LINC01827-201ENST00000432711 POLA1P09884 1462 aaPredicted RBP16.07■□□□□ 0.16
LINC01827-201ENST00000432711 RAD54L2Q9Y4B4 1467 aa16.03■□□□□ 0.16
LINC01827-201ENST00000432711 CLASP1Q7Z460 1538 aa16.03■□□□□ 0.16
LINC01827-201ENST00000432711 SNAPC4Q5SXM2 1469 aa16.02■□□□□ 0.15
LINC01827-201ENST00000432711 TDRD9Q8NDG6 1382 aaKnown RBP16.01■□□□□ 0.15
LINC01827-201ENST00000432711 SYNJ1O43426 1573 aa15.98■□□□□ 0.15
LINC01827-201ENST00000432711 SOGA1O94964 1423 aa15.96■□□□□ 0.15
LINC01827-201ENST00000432711 CHMP7Q8WUX9 453 aaPredicted RBP15.94■□□□□ 0.14
LINC01827-201ENST00000432711 FGD5Q6ZNL6 1462 aa15.92■□□□□ 0.14
LINC01827-201ENST00000432711 MAGI1Q96QZ7 1491 aaPredicted RBP15.91■□□□□ 0.14
LINC01827-201ENST00000432711 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
LINC01827-201ENST00000432711 GAPVD1Q14C86 1478 aa15.89■□□□□ 0.13
LINC01827-201ENST00000432711 PBRM1Q86U86 1689 aa15.87■□□□□ 0.13
LINC01827-201ENST00000432711 SYNJ2O15056 1496 aa15.87■□□□□ 0.13
LINC01827-201ENST00000432711 GRIN2BQ13224 1484 aa15.87■□□□□ 0.13
LINC01827-201ENST00000432711 CUX1P39880 1505 aa15.84■□□□□ 0.13
LINC01827-201ENST00000432711 ERCC6L2Q5T890 1561 aa15.8■□□□□ 0.12
LINC01827-201ENST00000432711 KIF13AQ9H1H9 1805 aa15.73■□□□□ 0.11
LINC01827-201ENST00000432711 ABCA5Q8WWZ7 1642 aa15.73■□□□□ 0.11
LINC01827-201ENST00000432711 CEP170Q5SW79 1584 aa15.7■□□□□ 0.1
LINC01827-201ENST00000432711 GRIN2AQ12879 1464 aa15.69■□□□□ 0.1
LINC01827-201ENST00000432711 ABCA10Q8WWZ4 1543 aa15.68■□□□□ 0.1
LINC01827-201ENST00000432711 ADAMTS12P58397 1594 aa15.66■□□□□ 0.1
LINC01827-201ENST00000432711 SHROOM2Q13796 1616 aa15.64■□□□□ 0.09
LINC01827-201ENST00000432711 NUP160Q12769 1436 aa15.62■□□□□ 0.09
LINC01827-201ENST00000432711 FHAD1B1AJZ9 1412 aa15.53■□□□□ 0.08
LINC01827-201ENST00000432711 PRG4Q92954 1404 aaPredicted RBP15.53■□□□□ 0.08
LINC01827-201ENST00000432711 WRNQ14191 1432 aaPredicted RBP eCLIP15.52■□□□□ 0.08
LINC01827-201ENST00000432711 FAM69CQ0P6D2 419 aa15.52■□□□□ 0.08
LINC01827-201ENST00000432711 TSPOAP1O95153 1857 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms